RNA–Protein interactions for RNA: ENST00000566510.5

CDH1-209, Transcript of cadherin 1, humanhuman

TSL 5

Gene CDH1, Length 2,661 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-209ENST00000566510 PMEPA1Q969W9 287 aa12.77□□□□□ -0.36
CDH1-209ENST00000566510 CMBLQ96DG6 245 aa12.77□□□□□ -0.36
CDH1-209ENST00000566510 NARS2Q96I59 477 aaKnown RBP12.77□□□□□ -0.36
CDH1-209ENST00000566510 ALX4Q9H161 411 aaPredicted RBP12.77□□□□□ -0.36
CDH1-209ENST00000566510 KLK13Q9UKR3 277 aa12.77□□□□□ -0.36
CDH1-209ENST00000566510 CNTRLQ7Z7A1 2325 aa12.77□□□□□ -0.36
CDH1-209ENST00000566510 A0A1W2PPC4 97 aa12.77□□□□□ -0.37
CDH1-209ENST00000566510 KANTRA0A1W2PQU2 76 aa12.77□□□□□ -0.37
CDH1-209ENST00000566510 A8MVM7 634 aa12.77□□□□□ -0.37
CDH1-209ENST00000566510 P2RY10O00398 339 aa12.77□□□□□ -0.37
CDH1-209ENST00000566510 PLPP3O14495 311 aa12.77□□□□□ -0.37
CDH1-209ENST00000566510 AHSA1O95433 338 aa12.77□□□□□ -0.37
CDH1-209ENST00000566510 CCR5P51681 352 aa12.77□□□□□ -0.37
CDH1-209ENST00000566510 LUMP51884 338 aaPredicted RBP12.77□□□□□ -0.37
CDH1-209ENST00000566510 PAPD4Q6PIY7 484 aaKnown RBP12.77□□□□□ -0.37
CDH1-209ENST00000566510 NUP54Q7Z3B4 507 aa12.77□□□□□ -0.37
CDH1-209ENST00000566510 ZBTB8AQ96BR9 441 aa12.77□□□□□ -0.37
CDH1-209ENST00000566510 C1orf198Q9H425 327 aa12.77□□□□□ -0.37
CDH1-209ENST00000566510 TAS2R3Q9NYW6 316 aa12.77□□□□□ -0.37
CDH1-209ENST00000566510 LOC101059948A0A1B0GTJ6 334 aa12.76□□□□□ -0.37
CDH1-209ENST00000566510 TLCD2A6NGC4 264 aa12.76□□□□□ -0.37
CDH1-209ENST00000566510 ALG1L2C9J202 215 aa12.76□□□□□ -0.37
CDH1-209ENST00000566510 TRIM77I1YAP6 450 aa12.76□□□□□ -0.37
CDH1-209ENST00000566510 SULT1C2O00338 296 aa12.76□□□□□ -0.37
CDH1-209ENST00000566510 HPP00738 406 aa12.76□□□□□ -0.37
CDH1-209ENST00000566510 CRABP1P29762 137 aa12.76□□□□□ -0.37
CDH1-209ENST00000566510 AGTR1P30556 359 aa12.76□□□□□ -0.37
CDH1-209ENST00000566510 FASLGP48023 281 aa12.76□□□□□ -0.37
CDH1-209ENST00000566510 FOXL2P58012 376 aa12.76□□□□□ -0.37
CDH1-209ENST00000566510 DEFA5Q01523 94 aa12.76□□□□□ -0.37
CDH1-209ENST00000566510 ELAVL1Q15717 326 aaKnown RBP12.76□□□□□ -0.37
CDH1-209ENST00000566510 OR52W1Q6IF63 320 aa12.76□□□□□ -0.37
CDH1-209ENST00000566510 SLC29A4Q7RTT9 530 aa12.76□□□□□ -0.37
CDH1-209ENST00000566510 GVQW1Q8N7I0 195 aa12.76□□□□□ -0.37
CDH1-209ENST00000566510 OR4D6Q8NGJ1 314 aa12.76□□□□□ -0.37
CDH1-209ENST00000566510 CASTOR1Q8WTX7 329 aa12.76□□□□□ -0.37
CDH1-209ENST00000566510 ZNF471Q9BX82 626 aaPredicted RBP12.76□□□□□ -0.37
CDH1-209ENST00000566510 VSX1Q9NZR4 365 aaPredicted RBP12.76□□□□□ -0.37
CDH1-209ENST00000566510 GPN3Q9UHW5 284 aaPredicted RBP12.76□□□□□ -0.37
CDH1-209ENST00000566510 OR52A1Q9UKL2 312 aa12.76□□□□□ -0.37
CDH1-209ENST00000566510 ATXN7L1Q9ULK2 861 aaPredicted RBP12.76□□□□□ -0.37
CDH1-209ENST00000566510 EIF4E2O60573 245 aaKnown RBP12.76□□□□□ -0.37
CDH1-209ENST00000566510 DXOO77932 396 aaKnown RBP12.76□□□□□ -0.37
CDH1-209ENST00000566510 MGMTP16455 207 aa12.76□□□□□ -0.37
CDH1-209ENST00000566510 CFPP27918 469 aa12.76□□□□□ -0.37
CDH1-209ENST00000566510 C16orf47Q6ZP98 133 aaPredicted RBP12.76□□□□□ -0.37
CDH1-209ENST00000566510 HSD17B13Q7Z5P4 300 aaPredicted RBP12.76□□□□□ -0.37
CDH1-209ENST00000566510 THAP3Q8WTV1 239 aaPredicted RBP12.76□□□□□ -0.37
CDH1-209ENST00000566510 ZNF285Q96NJ3 590 aa12.76□□□□□ -0.37
CDH1-209ENST00000566510 VRK1Q99986 396 aaPredicted RBP12.76□□□□□ -0.37
CDH1-209ENST00000566510 LDHAL6BQ9BYZ2 381 aaPredicted RBP12.76□□□□□ -0.37
CDH1-209ENST00000566510 WWTR1Q9GZV5 400 aa12.76□□□□□ -0.37
CDH1-209ENST00000566510 SCPEP1Q9HB40 452 aa12.76□□□□□ -0.37
CDH1-209ENST00000566510 WBP1LQ9NX94 342 aa12.76□□□□□ -0.37
CDH1-209ENST00000566510 MKL2Q9ULH7 1088 aa12.76□□□□□ -0.37
CDH1-209ENST00000566510 MMACHCQ9Y4U1 282 aa12.76□□□□□ -0.37
CDH1-209ENST00000566510 R4GMQ9 66 aa12.76□□□□□ -0.37
CDH1-209ENST00000566510 CABIN1Q9Y6J0 2220 aa12.76□□□□□ -0.37
CDH1-209ENST00000566510 METTL21EPA6NDL7 271 aa12.75□□□□□ -0.37
CDH1-209ENST00000566510 IGFBP3P17936 291 aaPredicted RBP12.75□□□□□ -0.37
CDH1-209ENST00000566510 VAMP1P23763 118 aa12.75□□□□□ -0.37
CDH1-209ENST00000566510 EFNA3P52797 238 aa12.75□□□□□ -0.37
CDH1-209ENST00000566510 FGL1Q08830 312 aa12.75□□□□□ -0.37
CDH1-209ENST00000566510 SLC22A6Q4U2R8 563 aa12.75□□□□□ -0.37
CDH1-209ENST00000566510 RNASE10Q5GAN6 216 aaKnown RBP12.75□□□□□ -0.37
CDH1-209ENST00000566510 RHOUQ7L0Q8 258 aa12.75□□□□□ -0.37
CDH1-209ENST00000566510 TRAPPC6BQ86SZ2 158 aa12.75□□□□□ -0.37
CDH1-209ENST00000566510 DAZLQ92904 295 aaKnown RBP12.75□□□□□ -0.37
CDH1-209ENST00000566510 FGGYQ96C11 551 aa12.75□□□□□ -0.37
CDH1-209ENST00000566510 ZNF75AQ96N20 296 aa12.75□□□□□ -0.37
CDH1-209ENST00000566510 CFAP54Q96N23 3096 aa12.75□□□□□ -0.37
CDH1-209ENST00000566510 A0A0D9SG52 128 aa12.75□□□□□ -0.37
CDH1-209ENST00000566510 MEGF11A6BM72 1044 aa12.75□□□□□ -0.37
CDH1-209ENST00000566510 DISC1C4P0D8 188 aa12.75□□□□□ -0.37
CDH1-209ENST00000566510 TSPAN2O60636 221 aa12.75□□□□□ -0.37
CDH1-209ENST00000566510 PLATP00750 562 aa12.75□□□□□ -0.37
CDH1-209ENST00000566510 DCNP07585 359 aaKnown RBP12.75□□□□□ -0.37
CDH1-209ENST00000566510 ARRB1P49407 418 aaPredicted RBP12.75□□□□□ -0.37
CDH1-209ENST00000566510 CAPZA1P52907 286 aa12.75□□□□□ -0.37
CDH1-209ENST00000566510 OR7A5Q15622 319 aa12.75□□□□□ -0.37
CDH1-209ENST00000566510 ATRAIDQ6UW56 229 aa12.75□□□□□ -0.37
CDH1-209ENST00000566510 KCTD9Q7L273 389 aa12.75□□□□□ -0.37
CDH1-209ENST00000566510 FJX1Q86VR8 437 aa12.75□□□□□ -0.37
CDH1-209ENST00000566510 GKN2Q86XP6 184 aa12.75□□□□□ -0.37
CDH1-209ENST00000566510 OR5M8Q8NGP6 311 aa12.75□□□□□ -0.37
CDH1-209ENST00000566510 OR13C8Q8NGS7 320 aa12.75□□□□□ -0.37
CDH1-209ENST00000566510 PPP1R1CQ8WVI7 109 aa12.75□□□□□ -0.37
CDH1-209ENST00000566510 OIT3Q8WWZ8 545 aa12.75□□□□□ -0.37
CDH1-209ENST00000566510 MRPS24Q96EL2 167 aaKnown RBP12.75□□□□□ -0.37
CDH1-209ENST00000566510 WDR13Q9H1Z4 485 aa12.75□□□□□ -0.37
CDH1-209ENST00000566510 SLCO5A1Q9H2Y9 848 aa12.75□□□□□ -0.37
CDH1-209ENST00000566510 A0A1B0GW55 424 aa12.75□□□□□ -0.37
CDH1-209ENST00000566510 NPIPA5E9PKD4 350 aa12.75□□□□□ -0.37
CDH1-209ENST00000566510 KCNAB3O43448 404 aa12.75□□□□□ -0.37
CDH1-209ENST00000566510 H2BFMP0C1H6 154 aa12.75□□□□□ -0.37
CDH1-209ENST00000566510 ZNF735P0CB33 412 aa12.75□□□□□ -0.37
CDH1-209ENST00000566510 UBBP0CG47 229 aa12.75□□□□□ -0.37
CDH1-209ENST00000566510 UBCP0CG48 685 aaKnown RBP12.75□□□□□ -0.37
CDH1-209ENST00000566510 DUX4L2P0CJ85 424 aa12.75□□□□□ -0.37
CDH1-209ENST00000566510 DUX4L3P0CJ86 424 aa12.75□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms