RNA–Protein interactions for RNA: ENST00000566328.2

SMG1-212, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 5

Gene SMG1, Length 550 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-212ENST00000566328 ACANP16112 2415 aa0.94□□□□□ -2.26
SMG1-212ENST00000566328 IGKV3D-11A0A0A0MRZ8 115 aa0.94□□□□□ -2.26
SMG1-212ENST00000566328 A0A0A6YYC8 382 aaPredicted RBP0.94□□□□□ -2.26
SMG1-212ENST00000566328 A0A0G2JMM0 328 aa0.94□□□□□ -2.26
SMG1-212ENST00000566328 IQANK1A0A1B0GTG1 560 aa0.94□□□□□ -2.26
SMG1-212ENST00000566328 A0A1W2PPB8 328 aa0.94□□□□□ -2.26
SMG1-212ENST00000566328 A0A1W2PPV9 198 aa0.94□□□□□ -2.26
SMG1-212ENST00000566328 A0A1W2PRS3 328 aa0.94□□□□□ -2.26
SMG1-212ENST00000566328 SLC5A10A0PJK1 596 aa0.94□□□□□ -2.26
SMG1-212ENST00000566328 RGSL1A5PLK6 1076 aa0.94□□□□□ -2.26
SMG1-212ENST00000566328 NCF1BA6NI72 391 aaPredicted RBP0.94□□□□□ -2.26
SMG1-212ENST00000566328 SDR42E2A6NKP2 422 aa0.94□□□□□ -2.26
SMG1-212ENST00000566328 OR5K4A6NMS3 321 aa0.94□□□□□ -2.26
SMG1-212ENST00000566328 NCF1CA8MVU1 366 aaPredicted RBP0.94□□□□□ -2.26
SMG1-212ENST00000566328 KIR3DP1A8MWS1 328 aa0.94□□□□□ -2.26
SMG1-212ENST00000566328 C19orf84I3L1E1 186 aa0.94□□□□□ -2.26
SMG1-212ENST00000566328 I3L1I5 382 aaPredicted RBP0.94□□□□□ -2.26
SMG1-212ENST00000566328 GFYI3L273 518 aa0.94□□□□□ -2.26
SMG1-212ENST00000566328 APOC4-APOC2K7ER74 178 aa0.94□□□□□ -2.26
SMG1-212ENST00000566328 PSMD11O00231 422 aa0.94□□□□□ -2.26
SMG1-212ENST00000566328 CDC7O00311 574 aa0.94□□□□□ -2.26
SMG1-212ENST00000566328 BET1O15155 118 aa0.94□□□□□ -2.26
SMG1-212ENST00000566328 YKT6O15498 198 aa0.94□□□□□ -2.26
SMG1-212ENST00000566328 TAPBPO15533 448 aa0.94□□□□□ -2.26
SMG1-212ENST00000566328 TTI1O43156 1089 aa0.94□□□□□ -2.26
SMG1-212ENST00000566328 ST8SIA3O43173 380 aa0.94□□□□□ -2.26
SMG1-212ENST00000566328 PSTPIP1O43586 416 aa0.94□□□□□ -2.26
SMG1-212ENST00000566328 OR1F1O43749 312 aa0.94□□□□□ -2.26
SMG1-212ENST00000566328 VEGFDO43915 354 aa0.94□□□□□ -2.26
SMG1-212ENST00000566328 SPAG7O75391 227 aa0.94□□□□□ -2.26
SMG1-212ENST00000566328 CBR3O75828 277 aa0.94□□□□□ -2.26
SMG1-212ENST00000566328 OR2B3O76000 313 aa0.94□□□□□ -2.26
SMG1-212ENST00000566328 LRATO95237 230 aa0.94□□□□□ -2.26
SMG1-212ENST00000566328 C1orf105O95561 183 aa0.94□□□□□ -2.26
SMG1-212ENST00000566328 AP2A1O95782 977 aa0.94□□□□□ -2.26
SMG1-212ENST00000566328 TXNDC12O95881 172 aa0.94□□□□□ -2.26
SMG1-212ENST00000566328 SLC16A8O95907 504 aa0.94□□□□□ -2.26
SMG1-212ENST00000566328 KRT14P02533 472 aa0.94□□□□□ -2.26
SMG1-212ENST00000566328 APOC2P02655 101 aa0.94□□□□□ -2.26
SMG1-212ENST00000566328 OPN1LWP04000 364 aa0.94□□□□□ -2.26
SMG1-212ENST00000566328 ALPPP05187 535 aa0.94□□□□□ -2.26
SMG1-212ENST00000566328 KLK3P07288 261 aaPredicted RBP0.94□□□□□ -2.26
SMG1-212ENST00000566328 MRPL3P09001 348 aaKnown RBP0.94□□□□□ -2.26
SMG1-212ENST00000566328 TPM1P09493 284 aa0.94□□□□□ -2.26
SMG1-212ENST00000566328 SLC35G4P0C7Q5 338 aa0.94□□□□□ -2.26
SMG1-212ENST00000566328 LIPCP11150 499 aa0.94□□□□□ -2.26
SMG1-212ENST00000566328 NCF1P14598 390 aaPredicted RBP0.94□□□□□ -2.26
SMG1-212ENST00000566328 ZNF30P17039 623 aa0.94□□□□□ -2.26
SMG1-212ENST00000566328 DESP17661 470 aa0.94□□□□□ -2.26
SMG1-212ENST00000566328 TSPAN8P19075 237 aa0.94□□□□□ -2.26
SMG1-212ENST00000566328 HLA-DPA1P20036 260 aa0.94□□□□□ -2.26
SMG1-212ENST00000566328 CD9P21926 228 aa0.94□□□□□ -2.26
SMG1-212ENST00000566328 NTSP30990 170 aa0.94□□□□□ -2.26
SMG1-212ENST00000566328 RORAP35398 523 aa0.94□□□□□ -2.26
SMG1-212ENST00000566328 CYLC1P35663 651 aaPredicted RBP0.94□□□□□ -2.26
SMG1-212ENST00000566328 COILP38432 576 aaPredicted RBP0.94□□□□□ -2.26
SMG1-212ENST00000566328 HSPA9P38646 679 aaKnown RBP0.94□□□□□ -2.26
SMG1-212ENST00000566328 CAPZBP47756 277 aa0.94□□□□□ -2.26
SMG1-212ENST00000566328 GABRA4P48169 554 aa0.94□□□□□ -2.26
SMG1-212ENST00000566328 NPY2RP49146 381 aa0.94□□□□□ -2.26
SMG1-212ENST00000566328 MNAT1P51948 309 aa0.94□□□□□ -2.26
SMG1-212ENST00000566328 HNRNPFP52597 415 aaKnown RBP0.94□□□□□ -2.26
SMG1-212ENST00000566328 EMP2P54851 167 aa0.94□□□□□ -2.26
SMG1-212ENST00000566328 GEMP55040 296 aa0.94□□□□□ -2.26
SMG1-212ENST00000566328 HADHBP55084 474 aaKnown RBP0.94□□□□□ -2.26
SMG1-212ENST00000566328 RAB8AP61006 207 aa0.94□□□□□ -2.26
SMG1-212ENST00000566328 RPL26P61254 145 aaKnown RBP0.94□□□□□ -2.26
SMG1-212ENST00000566328 GNG11P61952 73 aa0.94□□□□□ -2.26
SMG1-212ENST00000566328 RPS4XP62701 263 aaKnown RBP0.94□□□□□ -2.26
SMG1-212ENST00000566328 RPS15P62841 145 aaKnown RBP0.94□□□□□ -2.26
SMG1-212ENST00000566328 BTN3A2P78410 334 aa0.94□□□□□ -2.26
SMG1-212ENST00000566328 BASP1P80723 227 aaKnown RBP0.94□□□□□ -2.26
SMG1-212ENST00000566328 DCDP81605 110 aaKnown RBP0.94□□□□□ -2.26
SMG1-212ENST00000566328 ACTN3Q08043 901 aaPredicted RBP0.94□□□□□ -2.26
SMG1-212ENST00000566328 CDC20Q12834 499 aa0.94□□□□□ -2.26
SMG1-212ENST00000566328 UNC119Q13432 240 aa0.94□□□□□ -2.26
SMG1-212ENST00000566328 SCARB2Q14108 478 aa0.94□□□□□ -2.26
SMG1-212ENST00000566328 PRPSAP1Q14558 356 aa0.94□□□□□ -2.26
SMG1-212ENST00000566328 OR4D1Q15615 310 aa0.94□□□□□ -2.26
SMG1-212ENST00000566328 KLHL38Q2WGJ6 581 aa0.94□□□□□ -2.26
SMG1-212ENST00000566328 NKAIN1Q4KMZ8 207 aa0.94□□□□□ -2.26
SMG1-212ENST00000566328 DEFB134Q4QY38 66 aa0.94□□□□□ -2.26
SMG1-212ENST00000566328 ANKRD20A4Q4UJ75 823 aa0.94□□□□□ -2.26
SMG1-212ENST00000566328 LDLRAP1Q5SW96 308 aa0.94□□□□□ -2.26
SMG1-212ENST00000566328 PRR9Q5T870 116 aa0.94□□□□□ -2.26
SMG1-212ENST00000566328 MFSD4BQ5TF39 518 aa0.94□□□□□ -2.26
SMG1-212ENST00000566328 LRRC38Q5VT99 294 aa0.94□□□□□ -2.26
SMG1-212ENST00000566328 PTRHD1Q6GMV3 140 aaKnown RBP0.94□□□□□ -2.26
SMG1-212ENST00000566328 OR52W1Q6IF63 320 aa0.94□□□□□ -2.26
SMG1-212ENST00000566328 CCDC137Q6PK04 289 aaKnown RBP0.94□□□□□ -2.26
SMG1-212ENST00000566328 SPESP1Q6UW49 350 aa0.94□□□□□ -2.26
SMG1-212ENST00000566328 SCIMPQ6UWF3 145 aa0.94□□□□□ -2.26
SMG1-212ENST00000566328 DGAT2L6Q6ZPD8 337 aa0.94□□□□□ -2.26
SMG1-212ENST00000566328 LANCL3Q6ZV70 420 aa0.94□□□□□ -2.26
SMG1-212ENST00000566328 COX15Q7KZN9 410 aa0.94□□□□□ -2.26
SMG1-212ENST00000566328 BZW1Q7L1Q6 419 aaKnown RBP0.94□□□□□ -2.26
SMG1-212ENST00000566328 SNX20Q7Z614 316 aa0.94□□□□□ -2.26
SMG1-212ENST00000566328 SLC26A11Q86WA9 606 aa0.94□□□□□ -2.26
SMG1-212ENST00000566328 CDKL3Q8IVW4 592 aaPredicted RBP0.94□□□□□ -2.26
SMG1-212ENST00000566328 SIAH3Q8IW03 269 aa0.94□□□□□ -2.26
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms