RNA–Protein interactions for RNA: ENST00000565545.1

CSPG4P13-201, Transcript of chondroitin sulfate proteoglycan 4 pseudogene 13, humanhuman

TSL 5

Gene CSPG4P13, Length 657 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P13-201ENST00000565545 GFRALQ6UXV0 394 aa16.77■□□□□ 0.28
CSPG4P13-201ENST00000565545 RPTNQ6XPR3 784 aa16.77■□□□□ 0.28
CSPG4P13-201ENST00000565545 LINGO2Q7L985 606 aa16.77■□□□□ 0.28
CSPG4P13-201ENST00000565545 SYT9Q86SS6 491 aa16.77■□□□□ 0.28
CSPG4P13-201ENST00000565545 CD163Q86VB7 1156 aa16.77■□□□□ 0.28
CSPG4P13-201ENST00000565545 LINC00346Q8IVM7 164 aa16.77■□□□□ 0.28
CSPG4P13-201ENST00000565545 ALDH16A1Q8IZ83 802 aa16.77■□□□□ 0.28
CSPG4P13-201ENST00000565545 C9orf106Q8NAJ2 232 aa16.77■□□□□ 0.28
CSPG4P13-201ENST00000565545 GJC3Q8NFK1 279 aa16.77■□□□□ 0.28
CSPG4P13-201ENST00000565545 OR6K3Q8NGY3 331 aa16.77■□□□□ 0.28
CSPG4P13-201ENST00000565545 AMELYQ99218 206 aa16.77■□□□□ 0.28
CSPG4P13-201ENST00000565545 ZNF416Q9BWM5 594 aa16.77■□□□□ 0.28
CSPG4P13-201ENST00000565545 TP63Q9H3D4 680 aaPredicted RBP16.77■□□□□ 0.28
CSPG4P13-201ENST00000565545 ELOVL3Q9HB03 270 aa16.77■□□□□ 0.28
CSPG4P13-201ENST00000565545 ACOXLQ9NUZ1 547 aa16.77■□□□□ 0.28
CSPG4P13-201ENST00000565545 ST6GALNAC2Q9UJ37 374 aa16.77■□□□□ 0.28
CSPG4P13-201ENST00000565545 GDF2Q9UK05 429 aaPredicted RBP16.77■□□□□ 0.28
CSPG4P13-201ENST00000565545 SF3B6Q9Y3B4 125 aaKnown RBP16.77■□□□□ 0.28
CSPG4P13-201ENST00000565545 CELSR2Q9HCU4 2923 aa16.76■□□□□ 0.27
CSPG4P13-201ENST00000565545 SLC22A1O15245 554 aa16.76■□□□□ 0.27
CSPG4P13-201ENST00000565545 MAGEB4O15481 346 aaPredicted RBP16.76■□□□□ 0.27
CSPG4P13-201ENST00000565545 ZNHIT1O43257 154 aa16.76■□□□□ 0.27
CSPG4P13-201ENST00000565545 FARS2O95363 451 aaKnown RBP16.76■□□□□ 0.27
CSPG4P13-201ENST00000565545 TIMP3P35625 211 aa16.76■□□□□ 0.27
CSPG4P13-201ENST00000565545 PCBD1P61457 104 aa16.76■□□□□ 0.27
CSPG4P13-201ENST00000565545 HIST1H3AP68431 136 aa16.76■□□□□ 0.27
CSPG4P13-201ENST00000565545 ENDOGQ14249 297 aaKnown RBP16.76■□□□□ 0.27
CSPG4P13-201ENST00000565545 CDK5R1Q15078 307 aa16.76■□□□□ 0.27
CSPG4P13-201ENST00000565545 CNPY1Q3B7I2 92 aa16.76■□□□□ 0.27
CSPG4P13-201ENST00000565545 HIST2H3PS2Q5TEC6 136 aa16.76■□□□□ 0.27
CSPG4P13-201ENST00000565545 OTPQ5XKR4 325 aa16.76■□□□□ 0.27
CSPG4P13-201ENST00000565545 HIST2H3AQ71DI3 136 aa16.76■□□□□ 0.27
CSPG4P13-201ENST00000565545 RPS4Y2Q8TD47 263 aa16.76■□□□□ 0.27
CSPG4P13-201ENST00000565545 SLAMF6Q96DU3 332 aa16.76■□□□□ 0.27
CSPG4P13-201ENST00000565545 ZNF837Q96EG3 531 aaPredicted RBP16.76■□□□□ 0.27
CSPG4P13-201ENST00000565545 MAP6Q96JE9 813 aa16.76■□□□□ 0.27
CSPG4P13-201ENST00000565545 KCNN2Q9H2S1 579 aa16.76■□□□□ 0.27
CSPG4P13-201ENST00000565545 NIPAL2Q9H841 368 aa16.76■□□□□ 0.27
CSPG4P13-201ENST00000565545 ASH2LQ9UBL3 628 aa16.76■□□□□ 0.27
CSPG4P13-201ENST00000565545 MALT1Q9UDY8 824 aa16.76■□□□□ 0.27
CSPG4P13-201ENST00000565545 ZNF835Q9Y2P0 537 aa16.76■□□□□ 0.27
CSPG4P13-201ENST00000565545 TEP1Q99973 2627 aaKnown RBP16.75■□□□□ 0.27
CSPG4P13-201ENST00000565545 POLEQ07864 2286 aa16.75■□□□□ 0.27
CSPG4P13-201ENST00000565545 ABCA12Q86UK0 2595 aa16.75■□□□□ 0.27
CSPG4P13-201ENST00000565545 TRIM64BA6NI03 449 aa16.75■□□□□ 0.27
CSPG4P13-201ENST00000565545 ZNF878C9JN71 531 aa16.75■□□□□ 0.27
CSPG4P13-201ENST00000565545 E9PI62 339 aa16.75■□□□□ 0.27
CSPG4P13-201ENST00000565545 GPRIN2O60269 458 aa16.75■□□□□ 0.27
CSPG4P13-201ENST00000565545 HLA-DPB1P04440 258 aa16.75■□□□□ 0.27
CSPG4P13-201ENST00000565545 EDNRAP25101 427 aa16.75■□□□□ 0.27
CSPG4P13-201ENST00000565545 OPRL1P41146 370 aa16.75■□□□□ 0.27
CSPG4P13-201ENST00000565545 SP5Q6BEB4 398 aaPredicted RBP16.75■□□□□ 0.27
CSPG4P13-201ENST00000565545 RTL6Q6ICC9 239 aa16.75■□□□□ 0.27
CSPG4P13-201ENST00000565545 LRRN1Q6UXK5 716 aa16.75■□□□□ 0.27
CSPG4P13-201ENST00000565545 ZC3HAV1Q7Z2W4 902 aaKnown RBP16.75■□□□□ 0.27
CSPG4P13-201ENST00000565545 HIST2H2ABQ8IUE6 130 aaPredicted RBP16.75■□□□□ 0.27
CSPG4P13-201ENST00000565545 UBE2J2Q8N2K1 259 aa16.75■□□□□ 0.27
CSPG4P13-201ENST00000565545 SLC22A24Q8N4F4 322 aa16.75■□□□□ 0.27
CSPG4P13-201ENST00000565545 MS4A15Q8N5U1 240 aa16.75■□□□□ 0.27
CSPG4P13-201ENST00000565545 ZFP41Q8N8Y5 198 aa16.75■□□□□ 0.27
CSPG4P13-201ENST00000565545 SMIM19Q96E16 107 aa16.75■□□□□ 0.27
CSPG4P13-201ENST00000565545 OR51E2Q9H255 320 aa16.75■□□□□ 0.27
CSPG4P13-201ENST00000565545 SSR3Q9UNL2 185 aa16.75■□□□□ 0.27
CSPG4P13-201ENST00000565545 SIRT4Q9Y6E7 314 aaPredicted RBP16.75■□□□□ 0.27
CSPG4P13-201ENST00000565545 SVILO95425 2214 aa16.74■□□□□ 0.27
CSPG4P13-201ENST00000565545 TRBV2A0A0J9YWF9 115 aa16.74■□□□□ 0.27
CSPG4P13-201ENST00000565545 TRDV1A0A1B0GX56 115 aa16.74■□□□□ 0.27
CSPG4P13-201ENST00000565545 PSMD9O00233 223 aa16.74■□□□□ 0.27
CSPG4P13-201ENST00000565545 IL2RAP01589 272 aa16.74■□□□□ 0.27
CSPG4P13-201ENST00000565545 IGHV3-9P01782 118 aa16.74■□□□□ 0.27
CSPG4P13-201ENST00000565545 H2BFMP0C1H6 154 aa16.74■□□□□ 0.27
CSPG4P13-201ENST00000565545 MPGP29372 298 aa16.74■□□□□ 0.27
CSPG4P13-201ENST00000565545 CRYBB2P43320 205 aa16.74■□□□□ 0.27
CSPG4P13-201ENST00000565545 KIR2DL2P43627 348 aaPredicted RBP16.74■□□□□ 0.27
CSPG4P13-201ENST00000565545 CCR9P51686 369 aa16.74■□□□□ 0.27
CSPG4P13-201ENST00000565545 ARF1P84077 181 aaKnown RBP16.74■□□□□ 0.27
CSPG4P13-201ENST00000565545 SCRN3Q0VDG4 424 aa16.74■□□□□ 0.27
CSPG4P13-201ENST00000565545 ALKBH1Q13686 389 aaKnown RBP16.74■□□□□ 0.27
CSPG4P13-201ENST00000565545 CD200R1LQ6Q8B3 271 aa16.74■□□□□ 0.27
CSPG4P13-201ENST00000565545 CORO6Q6QEF8 472 aa16.74■□□□□ 0.27
CSPG4P13-201ENST00000565545 ARL9Q6T311 187 aa16.74■□□□□ 0.27
CSPG4P13-201ENST00000565545 ZNF813Q6ZN06 617 aa16.74■□□□□ 0.27
CSPG4P13-201ENST00000565545 DPPA2Q7Z7J5 298 aa16.74■□□□□ 0.27
CSPG4P13-201ENST00000565545 C12orf49Q9H741 205 aa16.74■□□□□ 0.27
CSPG4P13-201ENST00000565545 CENPMQ9NSP4 180 aa16.74■□□□□ 0.27
CSPG4P13-201ENST00000565545 GRIP1Q9Y3R0 1128 aa16.74■□□□□ 0.27
CSPG4P13-201ENST00000565545 LRP12Q9Y561 859 aa16.74■□□□□ 0.27
CSPG4P13-201ENST00000565545 FAM215AQ9Y5M1 114 aa16.74■□□□□ 0.27
CSPG4P13-201ENST00000565545 NCOA6Q14686 2063 aaPredicted RBP16.74■□□□□ 0.27
CSPG4P13-201ENST00000565545 CRYBG3Q68DQ2 2970 aa16.73■□□□□ 0.27
CSPG4P13-201ENST00000565545 FREM1Q5H8C1 2179 aa16.73■□□□□ 0.27
CSPG4P13-201ENST00000565545 ZG16O60844 167 aa16.73■□□□□ 0.27
CSPG4P13-201ENST00000565545 GPX5O75715 221 aa16.73■□□□□ 0.27
CSPG4P13-201ENST00000565545 RPP14O95059 124 aaKnown RBP16.73■□□□□ 0.27
CSPG4P13-201ENST00000565545 SERPINA3P01011 423 aa16.73■□□□□ 0.27
CSPG4P13-201ENST00000565545 FGF9P31371 208 aaPredicted RBP16.73■□□□□ 0.27
CSPG4P13-201ENST00000565545 PSMB10P40306 273 aa16.73■□□□□ 0.27
CSPG4P13-201ENST00000565545 GDI2P50395 445 aaKnown RBP16.73■□□□□ 0.27
CSPG4P13-201ENST00000565545 RPS25P62851 125 aaKnown RBP16.73■□□□□ 0.27
CSPG4P13-201ENST00000565545 GRB2P62993 217 aaKnown RBP16.73■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 51.7 ms