RNA–Protein interactions for RNA: ENST00000565453.1

CDH3-204, Transcript of cadherin 3, humanhuman

TSL 4

Gene CDH3, Length 532 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3-204ENST00000565453 GPANK1O95872 356 aa13.26□□□□□ -0.29
CDH3-204ENST00000565453 AVPP01185 164 aa13.26□□□□□ -0.29
CDH3-204ENST00000565453 ANPEPP15144 967 aa13.26□□□□□ -0.29
CDH3-204ENST00000565453 ITGA2P17301 1181 aa13.26□□□□□ -0.29
CDH3-204ENST00000565453 GSTM3P21266 225 aa13.26□□□□□ -0.29
CDH3-204ENST00000565453 RPS6KA3P51812 740 aa13.26□□□□□ -0.29
CDH3-204ENST00000565453 HIST1H3AP68431 136 aa13.26□□□□□ -0.29
CDH3-204ENST00000565453 HNRNPA0Q13151 305 aaKnown RBP13.26□□□□□ -0.29
CDH3-204ENST00000565453 KRT72Q14CN4 511 aa13.26□□□□□ -0.29
CDH3-204ENST00000565453 ZMAT1Q5H9K5 638 aa13.26□□□□□ -0.29
CDH3-204ENST00000565453 HIST2H3PS2Q5TEC6 136 aa13.26□□□□□ -0.29
CDH3-204ENST00000565453 LIPNQ5VXI9 398 aa13.26□□□□□ -0.29
CDH3-204ENST00000565453 ACSM5Q6NUN0 579 aa13.26□□□□□ -0.29
CDH3-204ENST00000565453 Q6ZR03 302 aa13.26□□□□□ -0.29
CDH3-204ENST00000565453 HIST2H3AQ71DI3 136 aa13.26□□□□□ -0.29
CDH3-204ENST00000565453 OR1F12Q8NHA8 337 aa13.26□□□□□ -0.29
CDH3-204ENST00000565453 CCL17Q92583 94 aa13.26□□□□□ -0.29
CDH3-204ENST00000565453 RAB1CQ92928 201 aa13.26□□□□□ -0.29
CDH3-204ENST00000565453 TIMD4Q96H15 378 aa13.26□□□□□ -0.29
CDH3-204ENST00000565453 TSSK2Q96PF2 358 aa13.26□□□□□ -0.29
CDH3-204ENST00000565453 RERGLQ9H628 205 aa13.26□□□□□ -0.29
CDH3-204ENST00000565453 METTL17Q9H7H0 456 aaPredicted RBP13.26□□□□□ -0.29
CDH3-204ENST00000565453 ARL8BQ9NVJ2 186 aa13.26□□□□□ -0.29
CDH3-204ENST00000565453 DCAF16Q9NXF7 216 aa13.26□□□□□ -0.29
CDH3-204ENST00000565453 PLEK2Q9NYT0 353 aa13.26□□□□□ -0.29
CDH3-204ENST00000565453 ATPIF1Q9UII2 106 aa13.26□□□□□ -0.29
CDH3-204ENST00000565453 MAGEL2Q9UJ55 1249 aa13.26□□□□□ -0.29
CDH3-204ENST00000565453 METRNQ9UJH8 293 aa13.26□□□□□ -0.29
CDH3-204ENST00000565453 IGLV1-36A0A0B4J1U3 117 aa13.25□□□□□ -0.29
CDH3-204ENST00000565453 ARPC2O15144 300 aa13.25□□□□□ -0.29
CDH3-204ENST00000565453 ARPC3O15145 178 aa13.25□□□□□ -0.29
CDH3-204ENST00000565453 RER1O15258 196 aa13.25□□□□□ -0.29
CDH3-204ENST00000565453 TIMM8AO60220 97 aaPredicted RBP13.25□□□□□ -0.29
CDH3-204ENST00000565453 GADD45GO95257 159 aa13.25□□□□□ -0.29
CDH3-204ENST00000565453 PPP1R3DO95685 299 aa13.25□□□□□ -0.29
CDH3-204ENST00000565453 PNPP00491 289 aa13.25□□□□□ -0.29
CDH3-204ENST00000565453 MSX2P35548 267 aaPredicted RBP13.25□□□□□ -0.29
CDH3-204ENST00000565453 ERFP50548 548 aa13.25□□□□□ -0.29
CDH3-204ENST00000565453 SMIM11AP58511 58 aa13.25□□□□□ -0.29
CDH3-204ENST00000565453 SPIBQ01892 262 aa13.25□□□□□ -0.29
CDH3-204ENST00000565453 RFX4Q33E94 735 aa13.25□□□□□ -0.29
CDH3-204ENST00000565453 SAMD4BQ5PRF9 694 aaKnown RBP13.25□□□□□ -0.29
CDH3-204ENST00000565453 PIGWQ7Z7B1 504 aa13.25□□□□□ -0.29
CDH3-204ENST00000565453 CPLX4Q7Z7G2 160 aa13.25□□□□□ -0.29
CDH3-204ENST00000565453 HAVCR1Q96D42 359 aa13.25□□□□□ -0.29
CDH3-204ENST00000565453 CMBLQ96DG6 245 aa13.25□□□□□ -0.29
CDH3-204ENST00000565453 CDRT15Q96T59 188 aa13.25□□□□□ -0.29
CDH3-204ENST00000565453 TMPRSS13Q9BYE2 586 aa13.25□□□□□ -0.29
CDH3-204ENST00000565453 OR52D1Q9H346 318 aa13.25□□□□□ -0.29
CDH3-204ENST00000565453 TAGLN3Q9UI15 199 aa13.25□□□□□ -0.29
CDH3-204ENST00000565453 DBHP09172 617 aa13.24□□□□□ -0.29
CDH3-204ENST00000565453 FPR3P25089 353 aa13.24□□□□□ -0.29
CDH3-204ENST00000565453 CRABP1P29762 137 aa13.24□□□□□ -0.29
CDH3-204ENST00000565453 RBMXP38159 391 aaKnown RBP13.24□□□□□ -0.29
CDH3-204ENST00000565453 GSSP48637 474 aa13.24□□□□□ -0.29
CDH3-204ENST00000565453 TNFAIP6P98066 277 aaPredicted RBP13.24□□□□□ -0.29
CDH3-204ENST00000565453 SLC3A1Q07837 685 aa13.24□□□□□ -0.29
CDH3-204ENST00000565453 MEP1BQ16820 701 aa13.24□□□□□ -0.29
CDH3-204ENST00000565453 FAHD2BQ6P2I3 314 aaPredicted RBP13.24□□□□□ -0.29
CDH3-204ENST00000565453 FANK1Q8TC84 345 aa13.24□□□□□ -0.29
CDH3-204ENST00000565453 FAHD2AQ96GK7 314 aa13.24□□□□□ -0.29
CDH3-204ENST00000565453 NSMCE2Q96MF7 247 aa13.24□□□□□ -0.29
CDH3-204ENST00000565453 ERMAPQ96PL5 475 aaPredicted RBP13.24□□□□□ -0.29
CDH3-204ENST00000565453 DCLRE1CQ96SD1 692 aaKnown RBP13.24□□□□□ -0.29
CDH3-204ENST00000565453 B9D1Q9UPM9 204 aa13.24□□□□□ -0.29
CDH3-204ENST00000565453 LHFPL6Q9Y693 200 aa13.24□□□□□ -0.29
CDH3-204ENST00000565453 J3QW42 95 aa13.23□□□□□ -0.29
CDH3-204ENST00000565453 VENTXO95231 258 aa13.23□□□□□ -0.29
CDH3-204ENST00000565453 IGHV2-70P01814 119 aa13.23□□□□□ -0.29
CDH3-204ENST00000565453 FABP3P05413 133 aa13.23□□□□□ -0.29
CDH3-204ENST00000565453 HIST1H1CP16403 213 aaKnown RBP13.23□□□□□ -0.29
CDH3-204ENST00000565453 SLC6A6P31641 620 aa13.23□□□□□ -0.29
CDH3-204ENST00000565453 GYS2P54840 703 aa13.23□□□□□ -0.29
CDH3-204ENST00000565453 DBPQ10586 325 aaPredicted RBP13.23□□□□□ -0.29
CDH3-204ENST00000565453 KRTAP27-1Q3LI81 207 aa13.23□□□□□ -0.29
CDH3-204ENST00000565453 C1orf94Q6P1W5 598 aa13.23□□□□□ -0.29
CDH3-204ENST00000565453 LEG1Q6P5S2 330 aa13.23□□□□□ -0.29
CDH3-204ENST00000565453 PGM2L1Q6PCE3 622 aa13.23□□□□□ -0.29
CDH3-204ENST00000565453 DNM1P34Q6PK57 102 aa13.23□□□□□ -0.29
CDH3-204ENST00000565453 OR6V1Q8N148 313 aa13.23□□□□□ -0.29
CDH3-204ENST00000565453 ZNF283Q8N7M2 679 aa13.23□□□□□ -0.29
CDH3-204ENST00000565453 SEMA6DQ8NFY4 1073 aa13.23□□□□□ -0.29
CDH3-204ENST00000565453 SLC26A10Q8NG04 563 aa13.23□□□□□ -0.29
CDH3-204ENST00000565453 PTP4A1Q93096 173 aa13.23□□□□□ -0.29
CDH3-204ENST00000565453 SAMD8Q96LT4 415 aa13.23□□□□□ -0.29
CDH3-204ENST00000565453 COG8Q96MW5 612 aa13.23□□□□□ -0.29
CDH3-204ENST00000565453 NMNAT3Q96T66 252 aa13.23□□□□□ -0.29
CDH3-204ENST00000565453 COQ7Q99807 217 aa13.23□□□□□ -0.29
CDH3-204ENST00000565453 GAL3ST1Q99999 423 aa13.23□□□□□ -0.29
CDH3-204ENST00000565453 IL1RAPQ9NPH3 570 aa13.23□□□□□ -0.29
CDH3-204ENST00000565453 ARL2BPQ9Y2Y0 163 aa13.23□□□□□ -0.29
CDH3-204ENST00000565453 NPTNQ9Y639 398 aa13.23□□□□□ -0.29
CDH3-204ENST00000565453 LOC105371242A0A075B767 164 aa13.22□□□□□ -0.29
CDH3-204ENST00000565453 A0A0A6YYJ9 748 aa13.22□□□□□ -0.29
CDH3-204ENST00000565453 OR10H3O60404 316 aa13.22□□□□□ -0.29
CDH3-204ENST00000565453 RAC2P15153 192 aa13.22□□□□□ -0.29
CDH3-204ENST00000565453 RRM2P31350 389 aa13.22□□□□□ -0.29
CDH3-204ENST00000565453 RGS6P49758 472 aa13.22□□□□□ -0.29
CDH3-204ENST00000565453 GNGT1P63211 74 aa13.22□□□□□ -0.29
CDH3-204ENST00000565453 COX10Q12887 443 aa13.22□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms