RNA–Protein interactions for RNA: ENST00000564664.5

GTF3C1-204, Transcript of general transcription factor IIIC subunit 1, humanhuman

TSL 5

Gene GTF3C1, Length 933 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-204ENST00000564664 NDUFAF4Q9P032 175 aa10.32□□□□□ -0.76
GTF3C1-204ENST00000564664 IL19Q9UHD0 177 aa10.32□□□□□ -0.76
GTF3C1-204ENST00000564664 PURGQ9UJV8 347 aaKnown RBP10.32□□□□□ -0.76
GTF3C1-204ENST00000564664 AURKCQ9UQB9 309 aa10.32□□□□□ -0.76
GTF3C1-204ENST00000564664 SIGLEC7Q9Y286 467 aa10.32□□□□□ -0.76
GTF3C1-204ENST00000564664 ADAM18Q9Y3Q7 739 aa10.32□□□□□ -0.76
GTF3C1-204ENST00000564664 NPTNQ9Y639 398 aa10.32□□□□□ -0.76
GTF3C1-204ENST00000564664 IMPA2O14732 288 aa10.31□□□□□ -0.76
GTF3C1-204ENST00000564664 DOK2O60496 412 aa10.31□□□□□ -0.76
GTF3C1-204ENST00000564664 SLC16A7O60669 478 aa10.31□□□□□ -0.76
GTF3C1-204ENST00000564664 RAC2P15153 192 aa10.31□□□□□ -0.76
GTF3C1-204ENST00000564664 CTLA4P16410 223 aa10.31□□□□□ -0.76
GTF3C1-204ENST00000564664 ZNF26P17031 533 aaPredicted RBP10.31□□□□□ -0.76
GTF3C1-204ENST00000564664 EPHA1P21709 976 aa10.31□□□□□ -0.76
GTF3C1-204ENST00000564664 FPR2P25090 351 aa10.31□□□□□ -0.76
GTF3C1-204ENST00000564664 CRABP1P29762 137 aa10.31□□□□□ -0.76
GTF3C1-204ENST00000564664 OMPP47874 163 aa10.31□□□□□ -0.76
GTF3C1-204ENST00000564664 LIMS1P48059 325 aa10.31□□□□□ -0.76
GTF3C1-204ENST00000564664 COMPP49747 757 aaPredicted RBP10.31□□□□□ -0.76
GTF3C1-204ENST00000564664 NUDT2P50583 147 aa10.31□□□□□ -0.76
GTF3C1-204ENST00000564664 HILS1P60008 231 aa10.31□□□□□ -0.76
GTF3C1-204ENST00000564664 KRR1Q13601 381 aaKnown RBP10.31□□□□□ -0.76
GTF3C1-204ENST00000564664 TMEM155Q4W5P6 130 aa10.31□□□□□ -0.76
GTF3C1-204ENST00000564664 TMEM255AQ5JRV8 349 aa10.31□□□□□ -0.76
GTF3C1-204ENST00000564664 DNM1P34Q6PK57 102 aa10.31□□□□□ -0.76
GTF3C1-204ENST00000564664 C12orf54Q6X4T0 127 aa10.31□□□□□ -0.76
GTF3C1-204ENST00000564664 C1orf229Q6ZS94 237 aaPredicted RBP10.31□□□□□ -0.76
GTF3C1-204ENST00000564664 TSEN54Q7Z6J9 526 aaKnown RBP10.31□□□□□ -0.76
GTF3C1-204ENST00000564664 LRRC28Q86X40 367 aaPredicted RBP10.31□□□□□ -0.76
GTF3C1-204ENST00000564664 SPICQ8N5J4 248 aa10.31□□□□□ -0.76
GTF3C1-204ENST00000564664 ZNF283Q8N7M2 679 aa10.31□□□□□ -0.76
GTF3C1-204ENST00000564664 GJC3Q8NFK1 279 aa10.31□□□□□ -0.76
GTF3C1-204ENST00000564664 OR1F12Q8NHA8 337 aa10.31□□□□□ -0.76
GTF3C1-204ENST00000564664 RASD2Q96D21 266 aa10.31□□□□□ -0.76
GTF3C1-204ENST00000564664 CMBLQ96DG6 245 aa10.31□□□□□ -0.76
GTF3C1-204ENST00000564664 C7orf34Q96L11 122 aa10.31□□□□□ -0.76
GTF3C1-204ENST00000564664 DHRS1Q96LJ7 313 aa10.31□□□□□ -0.76
GTF3C1-204ENST00000564664 RBM4Q9BWF3 364 aaKnown RBP10.31□□□□□ -0.76
GTF3C1-204ENST00000564664 TMPRSS13Q9BYE2 586 aa10.31□□□□□ -0.76
GTF3C1-204ENST00000564664 C7orf69Q9H7B7 122 aa10.31□□□□□ -0.76
GTF3C1-204ENST00000564664 MSL2Q9HCI7 577 aa10.31□□□□□ -0.76
GTF3C1-204ENST00000564664 EMC7Q9NPA0 242 aa10.31□□□□□ -0.76
GTF3C1-204ENST00000564664 SPAG4Q9NPE6 437 aa10.31□□□□□ -0.76
GTF3C1-204ENST00000564664 TMEM106BQ9NUM4 274 aa10.31□□□□□ -0.76
GTF3C1-204ENST00000564664 PLEK2Q9NYT0 353 aa10.31□□□□□ -0.76
GTF3C1-204ENST00000564664 POLR3KQ9Y2Y1 108 aaPredicted RBP10.31□□□□□ -0.76
GTF3C1-204ENST00000564664 STARD10Q9Y365 291 aa10.31□□□□□ -0.76
GTF3C1-204ENST00000564664 CACNG2Q9Y698 323 aa10.31□□□□□ -0.76
GTF3C1-204ENST00000564664 ANK2Q01484 3957 aa10.31□□□□□ -0.76
GTF3C1-204ENST00000564664 LOC105371242A0A075B767 164 aa10.3□□□□□ -0.76
GTF3C1-204ENST00000564664 OR6C6A6NF89 314 aa10.3□□□□□ -0.76
GTF3C1-204ENST00000564664 UNC119BA6NIH7 251 aa10.3□□□□□ -0.76
GTF3C1-204ENST00000564664 H7C1C5 153 aa10.3□□□□□ -0.76
GTF3C1-204ENST00000564664 IDH3BO43837 385 aa10.3□□□□□ -0.76
GTF3C1-204ENST00000564664 AVPP01185 164 aa10.3□□□□□ -0.76
GTF3C1-204ENST00000564664 IGHV2-70P01814 119 aa10.3□□□□□ -0.76
GTF3C1-204ENST00000564664 SBK2P0C263 348 aa10.3□□□□□ -0.76
GTF3C1-204ENST00000564664 LCN6P62502 163 aa10.3□□□□□ -0.76
GTF3C1-204ENST00000564664 SMARCD3Q6STE5 483 aa10.3□□□□□ -0.76
GTF3C1-204ENST00000564664 FBXW12Q6X9E4 464 aa10.3□□□□□ -0.76
GTF3C1-204ENST00000564664 KLHL36Q8N4N3 616 aa10.3□□□□□ -0.76
GTF3C1-204ENST00000564664 POP5Q969H6 163 aaKnown RBP10.3□□□□□ -0.76
GTF3C1-204ENST00000564664 FAM46AQ96IP4 442 aaKnown RBP10.3□□□□□ -0.76
GTF3C1-204ENST00000564664 MYLK2Q9H1R3 596 aa10.3□□□□□ -0.76
GTF3C1-204ENST00000564664 SYT4Q9H2B2 425 aa10.3□□□□□ -0.76
GTF3C1-204ENST00000564664 NTN4Q9HB63 628 aa10.3□□□□□ -0.76
GTF3C1-204ENST00000564664 GMPR2Q9P2T1 348 aaKnown RBP10.3□□□□□ -0.76
GTF3C1-204ENST00000564664 COA3Q9Y2R0 106 aaPredicted RBP10.3□□□□□ -0.76
GTF3C1-204ENST00000564664 IER3IP1Q9Y5U9 82 aa10.3□□□□□ -0.76
GTF3C1-204ENST00000564664 ISPDA4D126 451 aa10.29□□□□□ -0.76
GTF3C1-204ENST00000564664 ARPC3O15145 178 aa10.29□□□□□ -0.76
GTF3C1-204ENST00000564664 FSTL3O95633 263 aa10.29□□□□□ -0.76
GTF3C1-204ENST00000564664 NCK1P16333 377 aa10.29□□□□□ -0.76
GTF3C1-204ENST00000564664 ADRA2CP18825 462 aa10.29□□□□□ -0.76
GTF3C1-204ENST00000564664 IFNGR2P38484 337 aa10.29□□□□□ -0.76
GTF3C1-204ENST00000564664 HIST1H3AP68431 136 aa10.29□□□□□ -0.76
GTF3C1-204ENST00000564664 GABPB1Q06547 395 aaPredicted RBP10.29□□□□□ -0.76
GTF3C1-204ENST00000564664 ECH1Q13011 328 aa10.29□□□□□ -0.76
GTF3C1-204ENST00000564664 RFX4Q33E94 735 aa10.29□□□□□ -0.76
GTF3C1-204ENST00000564664 CCDC92Q53HC0 331 aaPredicted RBP10.29□□□□□ -0.76
GTF3C1-204ENST00000564664 FGD3Q5JSP0 725 aa10.29□□□□□ -0.76
GTF3C1-204ENST00000564664 HIST2H3PS2Q5TEC6 136 aa10.29□□□□□ -0.76
GTF3C1-204ENST00000564664 HIST2H3AQ71DI3 136 aa10.29□□□□□ -0.76
GTF3C1-204ENST00000564664 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP10.29□□□□□ -0.76
GTF3C1-204ENST00000564664 OR2Z1Q8NG97 314 aa10.29□□□□□ -0.76
GTF3C1-204ENST00000564664 OR13G1Q8NGZ3 307 aa10.29□□□□□ -0.76
GTF3C1-204ENST00000564664 APOBEC3DQ96AK3 386 aaPredicted RBP10.29□□□□□ -0.76
GTF3C1-204ENST00000564664 PYURFQ96I23 114 aa10.29□□□□□ -0.76
GTF3C1-204ENST00000564664 RSRC1Q96IZ7 334 aaKnown RBP10.29□□□□□ -0.76
GTF3C1-204ENST00000564664 COQ7Q99807 217 aa10.29□□□□□ -0.76
GTF3C1-204ENST00000564664 FUZQ9BT04 418 aa10.29□□□□□ -0.76
GTF3C1-204ENST00000564664 NUAK2Q9H093 628 aa10.29□□□□□ -0.76
GTF3C1-204ENST00000564664 HDHD2Q9H0R4 259 aa10.29□□□□□ -0.76
GTF3C1-204ENST00000564664 PATZ1Q9HBE1 687 aaKnown RBP10.29□□□□□ -0.76
GTF3C1-204ENST00000564664 ADA2Q9NZK5 511 aa10.29□□□□□ -0.76
GTF3C1-204ENST00000564664 ASH2LQ9UBL3 628 aa10.29□□□□□ -0.76
GTF3C1-204ENST00000564664 PPP1R3CQ9UQK1 317 aa10.29□□□□□ -0.76
GTF3C1-204ENST00000564664 TMEM89A2RUT3 159 aa10.28□□□□□ -0.76
GTF3C1-204ENST00000564664 SELEP16581 610 aa10.28□□□□□ -0.76
GTF3C1-204ENST00000564664 MDH2P40926 338 aaKnown RBP10.28□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 52.1 ms