RNA–Protein interactions for RNA: ENST00000564353.5

CLK3-215, Transcript of CDC like kinase 3, humanhuman

TSL 2

Gene CLK3, Length 2,847 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-215ENST00000564353 GLO1Q04760 184 aa12.07□□□□□ -0.48
CLK3-215ENST00000564353 NR0B2Q15466 257 aa12.07□□□□□ -0.48
CLK3-215ENST00000564353 ALKBH2Q6NS38 261 aa12.07□□□□□ -0.48
CLK3-215ENST00000564353 TMEM65Q6PI78 240 aa12.07□□□□□ -0.48
CLK3-215ENST00000564353 SLC36A1Q7Z2H8 476 aa12.07□□□□□ -0.48
CLK3-215ENST00000564353 TDHQ8IZJ6 230 aa12.07□□□□□ -0.48
CLK3-215ENST00000564353 GABRG1Q8N1C3 465 aa12.07□□□□□ -0.48
CLK3-215ENST00000564353 OR2AK2Q8NG84 335 aa12.07□□□□□ -0.48
CLK3-215ENST00000564353 OR1J2Q8NGS2 313 aa12.07□□□□□ -0.48
CLK3-215ENST00000564353 CMTM3Q96MX0 182 aa12.07□□□□□ -0.48
CLK3-215ENST00000564353 LINC00052Q96N35 136 aa12.07□□□□□ -0.48
CLK3-215ENST00000564353 PELOQ9BRX2 385 aaKnown RBP12.07□□□□□ -0.48
CLK3-215ENST00000564353 CKLFQ9UBR5 152 aa12.07□□□□□ -0.48
CLK3-215ENST00000564353 OR2M5A3KFT3 312 aa12.06□□□□□ -0.48
CLK3-215ENST00000564353 NPIPA5E9PKD4 350 aa12.06□□□□□ -0.48
CLK3-215ENST00000564353 NDUFS6O75380 124 aaKnown RBP12.06□□□□□ -0.48
CLK3-215ENST00000564353 RAB3DO95716 219 aa12.06□□□□□ -0.48
CLK3-215ENST00000564353 ACSM4P0C7M7 580 aa12.06□□□□□ -0.48
CLK3-215ENST00000564353 AKAIN1P0CW23 69 aa12.06□□□□□ -0.48
CLK3-215ENST00000564353 ARHGDIBP52566 201 aa12.06□□□□□ -0.48
CLK3-215ENST00000564353 HLXQ14774 488 aaPredicted RBP12.06□□□□□ -0.48
CLK3-215ENST00000564353 SLC25A45Q8N413 288 aa12.06□□□□□ -0.48
CLK3-215ENST00000564353 NUDCD2Q8WVJ2 157 aa12.06□□□□□ -0.48
CLK3-215ENST00000564353 INTS12Q96CB8 462 aaKnown RBP12.06□□□□□ -0.48
CLK3-215ENST00000564353 SEH1LQ96EE3 360 aa12.06□□□□□ -0.48
CLK3-215ENST00000564353 TTYH1Q9H313 450 aaPredicted RBP12.06□□□□□ -0.48
CLK3-215ENST00000564353 SLC22A11Q9NSA0 550 aa12.06□□□□□ -0.48
CLK3-215ENST00000564353 NPIPA1Q9UND3 350 aa12.06□□□□□ -0.48
CLK3-215ENST00000564353 A0A1W2PNR3 127 aa12.06□□□□□ -0.48
CLK3-215ENST00000564353 CPED1A4D0V7 1026 aa12.06□□□□□ -0.48
CLK3-215ENST00000564353 MS4A18H0YCH9 400 aa12.06□□□□□ -0.48
CLK3-215ENST00000564353 FAUP35544 74 aaKnown RBP12.06□□□□□ -0.48
CLK3-215ENST00000564353 PRKXP51817 358 aa12.06□□□□□ -0.48
CLK3-215ENST00000564353 SEC61A1P61619 476 aaKnown RBP12.06□□□□□ -0.48
CLK3-215ENST00000564353 HNRNPKP61978 463 aaKnown RBP eCLIP12.06□□□□□ -0.48
CLK3-215ENST00000564353 RNF4P78317 190 aa12.06□□□□□ -0.48
CLK3-215ENST00000564353 FOXF1Q12946 379 aa12.06□□□□□ -0.48
CLK3-215ENST00000564353 MS4A18Q3C1V0 323 aa12.06□□□□□ -0.48
CLK3-215ENST00000564353 CLLU1Q5K131 121 aa12.06□□□□□ -0.48
CLK3-215ENST00000564353 HIST2H2ABQ8IUE6 130 aaPredicted RBP12.06□□□□□ -0.48
CLK3-215ENST00000564353 OR52N5Q8NH56 324 aa12.06□□□□□ -0.48
CLK3-215ENST00000564353 STT3BQ8TCJ2 826 aa12.06□□□□□ -0.48
CLK3-215ENST00000564353 AKIRIN1Q9H9L7 192 aaPredicted RBP12.06□□□□□ -0.48
CLK3-215ENST00000564353 SLC2A4RGQ9NR83 387 aa12.06□□□□□ -0.48
CLK3-215ENST00000564353 OR52A1Q9UKL2 312 aa12.06□□□□□ -0.48
CLK3-215ENST00000564353 FER1L5A0AVI2 2057 aa12.06□□□□□ -0.48
CLK3-215ENST00000564353 A0A1W2PPC1 479 aa12.06□□□□□ -0.48
CLK3-215ENST00000564353 BLACEA4D250 179 aa12.06□□□□□ -0.48
CLK3-215ENST00000564353 ZNF98A6NK75 572 aa12.06□□□□□ -0.48
CLK3-215ENST00000564353 F5H5P2 479 aa12.06□□□□□ -0.48
CLK3-215ENST00000564353 IGLV3-19P01714 112 aa12.06□□□□□ -0.48
CLK3-215ENST00000564353 CD2P06729 351 aa12.06□□□□□ -0.48
CLK3-215ENST00000564353 CSF1P09603 554 aa12.06□□□□□ -0.48
CLK3-215ENST00000564353 GIPP09681 153 aaPredicted RBP12.06□□□□□ -0.48
CLK3-215ENST00000564353 ACHEP22303 614 aa12.06□□□□□ -0.48
CLK3-215ENST00000564353 BIDP55957 195 aa12.06□□□□□ -0.48
CLK3-215ENST00000564353 TLE3Q04726 772 aa12.06□□□□□ -0.48
CLK3-215ENST00000564353 KCTD18Q6PI47 426 aaPredicted RBP12.06□□□□□ -0.48
CLK3-215ENST00000564353 TMUB2Q71RG4 321 aa12.06□□□□□ -0.48
CLK3-215ENST00000564353 CLEC1AQ8NC01 280 aa12.06□□□□□ -0.48
CLK3-215ENST00000564353 ZBTB44Q8NCP5 570 aa12.06□□□□□ -0.48
CLK3-215ENST00000564353 SLC26A10Q8NG04 563 aa12.06□□□□□ -0.48
CLK3-215ENST00000564353 APMAPQ9HDC9 416 aa12.06□□□□□ -0.48
CLK3-215ENST00000564353 MMACHCQ9Y4U1 282 aa12.06□□□□□ -0.48
CLK3-215ENST00000564353 FRYQ5TBA9 3013 aa12.05□□□□□ -0.48
CLK3-215ENST00000564353 C10orf142B7Z368 130 aa12.05□□□□□ -0.48
CLK3-215ENST00000564353 YKT6O15498 198 aa12.05□□□□□ -0.48
CLK3-215ENST00000564353 FADS1O60427 444 aa12.05□□□□□ -0.48
CLK3-215ENST00000564353 PIAS2O75928 621 aa12.05□□□□□ -0.48
CLK3-215ENST00000564353 LPLP06858 475 aa12.05□□□□□ -0.48
CLK3-215ENST00000564353 MAP2K6P52564 334 aa12.05□□□□□ -0.48
CLK3-215ENST00000564353 COL13A1Q5TAT6 717 aaPredicted RBP12.05□□□□□ -0.48
CLK3-215ENST00000564353 TSSK4Q6SA08 328 aa12.05□□□□□ -0.48
CLK3-215ENST00000564353 RHOUQ7L0Q8 258 aa12.05□□□□□ -0.48
CLK3-215ENST00000564353 GRINAQ7Z429 371 aa12.05□□□□□ -0.48
CLK3-215ENST00000564353 CATSPERDQ86XM0 798 aa12.05□□□□□ -0.48
CLK3-215ENST00000564353 ZNF248Q8NDW4 579 aa12.05□□□□□ -0.48
CLK3-215ENST00000564353 OR52N4Q8NGI2 321 aa12.05□□□□□ -0.48
CLK3-215ENST00000564353 CASTOR1Q8WTX7 329 aa12.05□□□□□ -0.48
CLK3-215ENST00000564353 SLC41A2Q96JW4 573 aa12.05□□□□□ -0.48
CLK3-215ENST00000564353 KLRF1Q9NZS2 232 aa12.05□□□□□ -0.48
CLK3-215ENST00000564353 KLK13Q9UKR3 277 aa12.05□□□□□ -0.48
CLK3-215ENST00000564353 SLC5A6Q9Y289 635 aa12.05□□□□□ -0.48
CLK3-215ENST00000564353 SDK2Q58EX2 2172 aa12.05□□□□□ -0.48
CLK3-215ENST00000564353 TRAV20A0A0B4J274 112 aa12.05□□□□□ -0.48
CLK3-215ENST00000564353 DXOO77932 396 aaKnown RBP12.05□□□□□ -0.48
CLK3-215ENST00000564353 RRASP10301 218 aa12.05□□□□□ -0.48
CLK3-215ENST00000564353 SFTPDP35247 375 aa12.05□□□□□ -0.48
CLK3-215ENST00000564353 DLX5P56178 289 aa12.05□□□□□ -0.48
CLK3-215ENST00000564353 SLC26A5P58743 744 aa12.05□□□□□ -0.48
CLK3-215ENST00000564353 RAP2BP61225 183 aa12.05□□□□□ -0.48
CLK3-215ENST00000564353 PMPCAQ10713 525 aa12.05□□□□□ -0.48
CLK3-215ENST00000564353 MFAP5Q13361 173 aa12.05□□□□□ -0.48
CLK3-215ENST00000564353 CDNFQ49AH0 187 aa12.05□□□□□ -0.48
CLK3-215ENST00000564353 GLT8D1Q68CQ7 371 aa12.05□□□□□ -0.48
CLK3-215ENST00000564353 OR13C9Q8NGT0 318 aa12.05□□□□□ -0.48
CLK3-215ENST00000564353 RBPMSQ93062 196 aaKnown RBP12.05□□□□□ -0.48
CLK3-215ENST00000564353 SLC25A28Q96A46 364 aa12.05□□□□□ -0.48
CLK3-215ENST00000564353 CNTD2Q9H8S5 307 aa12.05□□□□□ -0.48
CLK3-215ENST00000564353 A0A1B0GX78 115 aa12.04□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms