RNA–Protein interactions for RNA: ENST00000564272.1

SHCBP1-203, Transcript of SHC binding and spindle associated 1, humanhuman

TSL 3

Gene SHCBP1, Length 530 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHCBP1-203ENST00000564272 SRD5A1P18405 259 aa16.99■□□□□ 0.31
SHCBP1-203ENST00000564272 CRABP1P29762 137 aa16.99■□□□□ 0.31
SHCBP1-203ENST00000564272 TSPAN31Q12999 210 aa16.99■□□□□ 0.31
SHCBP1-203ENST00000564272 KCNMB1Q16558 191 aa16.99■□□□□ 0.31
SHCBP1-203ENST00000564272 CR1LQ2VPA4 569 aa16.99■□□□□ 0.31
SHCBP1-203ENST00000564272 AVPI1Q5T686 147 aa16.99■□□□□ 0.31
SHCBP1-203ENST00000564272 DNM1P34Q6PK57 102 aa16.99■□□□□ 0.31
SHCBP1-203ENST00000564272 C1orf174Q8IYL3 243 aa16.99■□□□□ 0.31
SHCBP1-203ENST00000564272 SDR9C7Q8NEX9 313 aa16.99■□□□□ 0.31
SHCBP1-203ENST00000564272 BTBD10Q9BSF8 475 aa16.99■□□□□ 0.31
SHCBP1-203ENST00000564272 FN3KQ9H479 309 aa16.99■□□□□ 0.31
SHCBP1-203ENST00000564272 EGLN3Q9H6Z9 239 aa16.99■□□□□ 0.31
SHCBP1-203ENST00000564272 TREM2Q9NZC2 230 aa16.99■□□□□ 0.31
SHCBP1-203ENST00000564272 B9D1Q9UPM9 204 aa16.99■□□□□ 0.31
SHCBP1-203ENST00000564272 FAM157AC9JC47 383 aa16.98■□□□□ 0.31
SHCBP1-203ENST00000564272 TNFRSF11BO00300 401 aa16.98■□□□□ 0.31
SHCBP1-203ENST00000564272 TIMM8AO60220 97 aaPredicted RBP16.98■□□□□ 0.31
SHCBP1-203ENST00000564272 KRT36O76013 467 aa16.98■□□□□ 0.31
SHCBP1-203ENST00000564272 RENP00797 406 aa16.98■□□□□ 0.31
SHCBP1-203ENST00000564272 DBHP09172 617 aa16.98■□□□□ 0.31
SHCBP1-203ENST00000564272 T-ENOLP0DO92 83 aa16.98■□□□□ 0.31
SHCBP1-203ENST00000564272 CALB2P22676 271 aa16.98■□□□□ 0.31
SHCBP1-203ENST00000564272 NOS3P29474 1203 aa16.98■□□□□ 0.31
SHCBP1-203ENST00000564272 CRYBB2P43320 205 aa16.98■□□□□ 0.31
SHCBP1-203ENST00000564272 MAGEA2P43356 314 aa16.98■□□□□ 0.31
SHCBP1-203ENST00000564272 MTX3Q5HYI7 312 aa16.98■□□□□ 0.31
SHCBP1-203ENST00000564272 CLEC12AQ5QGZ9 265 aa16.98■□□□□ 0.31
SHCBP1-203ENST00000564272 LCN8Q6JVE9 175 aa16.98■□□□□ 0.31
SHCBP1-203ENST00000564272 CXXC5Q7LFL8 322 aaKnown RBP16.98■□□□□ 0.31
SHCBP1-203ENST00000564272 DHFR2Q86XF0 187 aa16.98■□□□□ 0.31
SHCBP1-203ENST00000564272 OR6V1Q8N148 313 aa16.98■□□□□ 0.31
SHCBP1-203ENST00000564272 ARHGAP24Q8N264 748 aa16.98■□□□□ 0.31
SHCBP1-203ENST00000564272 NPEPL1Q8NDH3 523 aa16.98■□□□□ 0.31
SHCBP1-203ENST00000564272 OR4C15Q8NGM1 316 aa16.98■□□□□ 0.31
SHCBP1-203ENST00000564272 OR1F12Q8NHA8 337 aa16.98■□□□□ 0.31
SHCBP1-203ENST00000564272 MUC13Q9H3R2 512 aa16.98■□□□□ 0.31
SHCBP1-203ENST00000564272 MSL2Q9HCI7 577 aa16.98■□□□□ 0.31
SHCBP1-203ENST00000564272 SRA1Q9HD15 236 aaKnown RBP16.98■□□□□ 0.31
SHCBP1-203ENST00000564272 RPRD1BQ9NQG5 326 aaKnown RBP16.98■□□□□ 0.31
SHCBP1-203ENST00000564272 TBCCD1Q9NVR7 557 aa16.98■□□□□ 0.31
SHCBP1-203ENST00000564272 LHFPL6Q9Y693 200 aa16.98■□□□□ 0.31
SHCBP1-203ENST00000564272 HNF1AP20823 631 aa16.97■□□□□ 0.31
SHCBP1-203ENST00000564272 GSTM3P21266 225 aa16.97■□□□□ 0.31
SHCBP1-203ENST00000564272 MS4A2Q01362 244 aa16.97■□□□□ 0.31
SHCBP1-203ENST00000564272 TEKQ02763 1124 aa16.97■□□□□ 0.31
SHCBP1-203ENST00000564272 MVKQ03426 396 aa16.97■□□□□ 0.31
SHCBP1-203ENST00000564272 PPP1R8Q12972 351 aaKnown RBP16.97■□□□□ 0.31
SHCBP1-203ENST00000564272 PSG7Q13046 419 aa16.97■□□□□ 0.31
SHCBP1-203ENST00000564272 HNRNPA0Q13151 305 aaKnown RBP16.97■□□□□ 0.31
SHCBP1-203ENST00000564272 FAM209AQ5JX71 171 aa16.97■□□□□ 0.31
SHCBP1-203ENST00000564272 SLC35F1Q5T1Q4 408 aa16.97■□□□□ 0.31
SHCBP1-203ENST00000564272 CORO6Q6QEF8 472 aa16.97■□□□□ 0.31
SHCBP1-203ENST00000564272 LPAR2Q9HBW0 351 aa16.97■□□□□ 0.31
SHCBP1-203ENST00000564272 CYSLTR2Q9NS75 346 aa16.97■□□□□ 0.31
SHCBP1-203ENST00000564272 VNN3Q9NY84 501 aa16.97■□□□□ 0.31
SHCBP1-203ENST00000564272 STARD10Q9Y365 291 aa16.97■□□□□ 0.31
SHCBP1-203ENST00000564272 CDH10Q9Y6N8 788 aa16.97■□□□□ 0.31
SHCBP1-203ENST00000564272 COL6A5A8TX70 2615 aa16.97■□□□□ 0.31
SHCBP1-203ENST00000564272 OR6C68A6NDL8 312 aa16.96■□□□□ 0.31
SHCBP1-203ENST00000564272 CCNB2O95067 398 aa16.96■□□□□ 0.31
SHCBP1-203ENST00000564272 TFP02787 698 aa16.96■□□□□ 0.31
SHCBP1-203ENST00000564272 ERFP50548 548 aa16.96■□□□□ 0.31
SHCBP1-203ENST00000564272 HMGA2P52926 109 aa16.96■□□□□ 0.31
SHCBP1-203ENST00000564272 KHDRBS1Q07666 443 aaKnown RBP eCLIP16.96■□□□□ 0.31
SHCBP1-203ENST00000564272 TRIM25Q14258 630 aaKnown RBP16.96■□□□□ 0.31
SHCBP1-203ENST00000564272 SPRNQ5BIV9 151 aa16.96■□□□□ 0.31
SHCBP1-203ENST00000564272 ZNF770Q6IQ21 691 aaPredicted RBP16.96■□□□□ 0.31
SHCBP1-203ENST00000564272 PGM2L1Q6PCE3 622 aa16.96■□□□□ 0.31
SHCBP1-203ENST00000564272 SLC26A10Q8NG04 563 aa16.96■□□□□ 0.31
SHCBP1-203ENST00000564272 OR52E2Q8NGJ4 325 aa16.96■□□□□ 0.31
SHCBP1-203ENST00000564272 CCDC124Q96CT7 223 aaKnown RBP16.96■□□□□ 0.31
SHCBP1-203ENST00000564272 ELMOD3Q96FG2 381 aa16.96■□□□□ 0.31
SHCBP1-203ENST00000564272 CLPTM1LQ96KA5 538 aa16.96■□□□□ 0.31
SHCBP1-203ENST00000564272 PLA2G12AQ9BZM1 189 aa16.96■□□□□ 0.31
SHCBP1-203ENST00000564272 TRIM15Q9C019 465 aa16.96■□□□□ 0.31
SHCBP1-203ENST00000564272 MAGIXQ9H6Y5 334 aa16.96■□□□□ 0.31
SHCBP1-203ENST00000564272 SVEP1Q4LDE5 3571 aa16.96■□□□□ 0.31
SHCBP1-203ENST00000564272 B4DSR2 109 aa16.95■□□□□ 0.3
SHCBP1-203ENST00000564272 CLDN25C9JDP6 229 aa16.95■□□□□ 0.3
SHCBP1-203ENST00000564272 IDH3BO43837 385 aa16.95■□□□□ 0.3
SHCBP1-203ENST00000564272 ADH4P08319 380 aa16.95■□□□□ 0.3
SHCBP1-203ENST00000564272 DVL1P1P54792 670 aaPredicted RBP16.95■□□□□ 0.3
SHCBP1-203ENST00000564272 LMO4P61968 165 aa16.95■□□□□ 0.3
SHCBP1-203ENST00000564272 HIST1H3AP68431 136 aa16.95■□□□□ 0.3
SHCBP1-203ENST00000564272 HFEQ30201 348 aa16.95■□□□□ 0.3
SHCBP1-203ENST00000564272 HIST2H3PS2Q5TEC6 136 aa16.95■□□□□ 0.3
SHCBP1-203ENST00000564272 HIST2H3AQ71DI3 136 aa16.95■□□□□ 0.3
SHCBP1-203ENST00000564272 LINC00346Q8IVM7 164 aa16.95■□□□□ 0.3
SHCBP1-203ENST00000564272 OR52L1Q8NGH7 329 aa16.95■□□□□ 0.3
SHCBP1-203ENST00000564272 OR8D4Q8NGM9 314 aa16.95■□□□□ 0.3
SHCBP1-203ENST00000564272 CGGBP1Q9UFW8 167 aaPredicted RBP16.95■□□□□ 0.3
SHCBP1-203ENST00000564272 ATPIF1Q9UII2 106 aa16.95■□□□□ 0.3
SHCBP1-203ENST00000564272 KLHL21Q9UJP4 597 aa16.95■□□□□ 0.3
SHCBP1-203ENST00000564272 PURGQ9UJV8 347 aaKnown RBP16.95■□□□□ 0.3
SHCBP1-203ENST00000564272 PRPF19Q9UMS4 504 aaKnown RBP16.95■□□□□ 0.3
SHCBP1-203ENST00000564272 TANC2Q9HCD6 1990 aa16.95■□□□□ 0.3
SHCBP1-203ENST00000564272 MXRA5Q9NR99 2828 aa16.94■□□□□ 0.3
SHCBP1-203ENST00000564272 RNF212BA8MTL3 300 aa16.94■□□□□ 0.3
SHCBP1-203ENST00000564272 BHLHE40O14503 412 aa16.94■□□□□ 0.3
SHCBP1-203ENST00000564272 PHF1O43189 567 aaPredicted RBP16.94■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms