RNA–Protein interactions for RNA: ENST00000564255.5

CHD9-209, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 5

Gene CHD9, Length 2,896 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-209ENST00000564255 F2RP25116 425 aa1.76□□□□□ -2.13
CHD9-209ENST00000564255 NUDT1P36639 197 aa1.76□□□□□ -2.13
CHD9-209ENST00000564255 CRISP3P54108 245 aa1.76□□□□□ -2.13
CHD9-209ENST00000564255 PRR3P79522 188 aaKnown RBP1.76□□□□□ -2.13
CHD9-209ENST00000564255 MLIPQ5VWP3 458 aa1.76□□□□□ -2.13
CHD9-209ENST00000564255 SLC25A25Q6KCM7 469 aa1.76□□□□□ -2.13
CHD9-209ENST00000564255 WDR82Q6UXN9 313 aa1.76□□□□□ -2.13
CHD9-209ENST00000564255 ZNF493Q6ZR52 646 aa1.76□□□□□ -2.13
CHD9-209ENST00000564255 STRADAQ7RTN6 431 aa1.76□□□□□ -2.13
CHD9-209ENST00000564255 FAM58AQ8N1B3 248 aa1.76□□□□□ -2.13
CHD9-209ENST00000564255 FBXO36Q8NEA4 188 aa1.76□□□□□ -2.13
CHD9-209ENST00000564255 OR8K3Q8NH51 312 aa1.76□□□□□ -2.13
CHD9-209ENST00000564255 ITFG1Q8TB96 612 aa1.76□□□□□ -2.13
CHD9-209ENST00000564255 ISOC2Q96AB3 205 aa1.76□□□□□ -2.13
CHD9-209ENST00000564255 FAM3DQ96BQ1 224 aa1.76□□□□□ -2.13
CHD9-209ENST00000564255 PHYHIPLQ96FC7 376 aa1.76□□□□□ -2.13
CHD9-209ENST00000564255 NRTNQ99748 197 aa1.76□□□□□ -2.13
CHD9-209ENST00000564255 FOXC2Q99958 501 aa1.76□□□□□ -2.13
CHD9-209ENST00000564255 STMN4Q9H169 189 aaPredicted RBP1.76□□□□□ -2.13
CHD9-209ENST00000564255 DMAP1Q9NPF5 467 aaPredicted RBP1.76□□□□□ -2.13
CHD9-209ENST00000564255 ZNF226Q9NYT6 803 aa1.76□□□□□ -2.13
CHD9-209ENST00000564255 ADAMTS9Q9P2N4 1935 aa1.76□□□□□ -2.13
CHD9-209ENST00000564255 GAKO14976 1311 aa1.76□□□□□ -2.13
CHD9-209ENST00000564255 RNF113AO15541 343 aaKnown RBP1.76□□□□□ -2.13
CHD9-209ENST00000564255 IGHV4-34P06331 123 aa1.76□□□□□ -2.13
CHD9-209ENST00000564255 GNAO1P09471 354 aa1.76□□□□□ -2.13
CHD9-209ENST00000564255 TPM1P09493 284 aa1.76□□□□□ -2.13
CHD9-209ENST00000564255 GIPP09681 153 aaPredicted RBP1.76□□□□□ -2.13
CHD9-209ENST00000564255 KRTAP1-4P0C5Y4 121 aa1.76□□□□□ -2.13
CHD9-209ENST00000564255 RHOXF2BP0C7M4 288 aa1.76□□□□□ -2.13
CHD9-209ENST00000564255 NEFHP12036 1026 aa1.76□□□□□ -2.13
CHD9-209ENST00000564255 PTNP21246 168 aa1.76□□□□□ -2.13
CHD9-209ENST00000564255 OMGP23515 440 aa1.76□□□□□ -2.13
CHD9-209ENST00000564255 CCNE1P24864 410 aa1.76□□□□□ -2.13
CHD9-209ENST00000564255 NUP62P37198 522 aaPredicted RBP1.76□□□□□ -2.13
CHD9-209ENST00000564255 XIAPP98170 497 aa1.76□□□□□ -2.13
CHD9-209ENST00000564255 ZNF33AQ06730 810 aa1.76□□□□□ -2.13
CHD9-209ENST00000564255 QPRTQ15274 297 aa1.76□□□□□ -2.13
CHD9-209ENST00000564255 RNF212Q495C1 297 aa1.76□□□□□ -2.13
CHD9-209ENST00000564255 FBXO48Q5FWF7 155 aa1.76□□□□□ -2.13
CHD9-209ENST00000564255 TPTE2P1Q5T6R2 138 aa1.76□□□□□ -2.13
CHD9-209ENST00000564255 FBXW12Q6X9E4 464 aa1.76□□□□□ -2.13
CHD9-209ENST00000564255 DRAXINQ8NBI3 349 aaPredicted RBP1.76□□□□□ -2.13
CHD9-209ENST00000564255 NOXO1Q8NFA2 376 aa1.76□□□□□ -2.13
CHD9-209ENST00000564255 OR51F2Q8NH61 342 aa1.76□□□□□ -2.13
CHD9-209ENST00000564255 PIH1D2Q8WWB5 315 aa1.76□□□□□ -2.13
CHD9-209ENST00000564255 TMEM230Q96A57 120 aa1.76□□□□□ -2.13
CHD9-209ENST00000564255 MRGPRFQ96AM1 343 aa1.76□□□□□ -2.13
CHD9-209ENST00000564255 DNAJC19Q96DA6 116 aa1.76□□□□□ -2.13
CHD9-209ENST00000564255 RHOXF2Q9BQY4 288 aa1.76□□□□□ -2.13
CHD9-209ENST00000564255 HAUS4Q9H6D7 363 aa1.76□□□□□ -2.13
CHD9-209ENST00000564255 SLCO1B3Q9NPD5 702 aa1.76□□□□□ -2.13
CHD9-209ENST00000564255 ABCB10Q9NRK6 738 aa1.76□□□□□ -2.13
CHD9-209ENST00000564255 PSG8Q9UQ74 426 aa1.76□□□□□ -2.13
CHD9-209ENST00000564255 BZW2Q9Y6E2 419 aaKnown RBP1.76□□□□□ -2.13
CHD9-209ENST00000564255 CARMIL3Q8ND23 1372 aa1.76□□□□□ -2.13
CHD9-209ENST00000564255 FANCD2Q9BXW9 1451 aa1.75□□□□□ -2.13
CHD9-209ENST00000564255 LINC00854A0A1B0GVQ3 168 aa1.75□□□□□ -2.13
CHD9-209ENST00000564255 KLF8O95600 359 aaPredicted RBP1.75□□□□□ -2.13
CHD9-209ENST00000564255 RETP07949 1114 aa1.75□□□□□ -2.13
CHD9-209ENST00000564255 ZNF17P17021 662 aa1.75□□□□□ -2.13
CHD9-209ENST00000564255 ZNF19P17023 458 aa1.75□□□□□ -2.13
CHD9-209ENST00000564255 ELK1P19419 428 aa1.75□□□□□ -2.13
CHD9-209ENST00000564255 CSKP41240 450 aa1.75□□□□□ -2.13
CHD9-209ENST00000564255 WNT4P56705 351 aa1.75□□□□□ -2.13
CHD9-209ENST00000564255 ZNF121P58317 390 aaPredicted RBP1.75□□□□□ -2.13
CHD9-209ENST00000564255 TAS2R39P59534 338 aa1.75□□□□□ -2.13
CHD9-209ENST00000564255 PSG7Q13046 419 aa1.75□□□□□ -2.13
CHD9-209ENST00000564255 UNC119Q13432 240 aa1.75□□□□□ -2.13
CHD9-209ENST00000564255 POU2AF1Q16633 256 aa1.75□□□□□ -2.13
CHD9-209ENST00000564255 TMEM183BQ1AE95 376 aa1.75□□□□□ -2.13
CHD9-209ENST00000564255 HSP90AA4PQ58FG1 418 aa1.75□□□□□ -2.13
CHD9-209ENST00000564255 THEM4Q5T1C6 240 aa1.75□□□□□ -2.13
CHD9-209ENST00000564255 LIN9Q5TKA1 542 aa1.75□□□□□ -2.13
CHD9-209ENST00000564255 FBXL22Q6P050 247 aa1.75□□□□□ -2.13
CHD9-209ENST00000564255 OAFQ86UD1 273 aa1.75□□□□□ -2.13
CHD9-209ENST00000564255 TMEM183AQ8IXX5 376 aa1.75□□□□□ -2.13
CHD9-209ENST00000564255 ZFP41Q8N8Y5 198 aa1.75□□□□□ -2.13
CHD9-209ENST00000564255 ASCC1Q8N9N2 400 aaKnown RBP1.75□□□□□ -2.13
CHD9-209ENST00000564255 OR52E2Q8NGJ4 325 aa1.75□□□□□ -2.13
CHD9-209ENST00000564255 OR51L1Q8NGJ5 315 aa1.75□□□□□ -2.13
CHD9-209ENST00000564255 OR13C9Q8NGT0 318 aa1.75□□□□□ -2.13
CHD9-209ENST00000564255 RPEQ96AT9 228 aa1.75□□□□□ -2.13
CHD9-209ENST00000564255 GPR21Q99679 349 aa1.75□□□□□ -2.13
CHD9-209ENST00000564255 CALN1Q9BXU9 219 aa1.75□□□□□ -2.13
CHD9-209ENST00000564255 GAL3ST2Q9H3Q3 398 aa1.75□□□□□ -2.13
CHD9-209ENST00000564255 ZC4H2Q9NQZ6 224 aa1.75□□□□□ -2.13
CHD9-209ENST00000564255 ZNF225Q9UK10 706 aa1.75□□□□□ -2.13
CHD9-209ENST00000564255 NOSIPQ9Y314 301 aaKnown RBP1.75□□□□□ -2.13
CHD9-209ENST00000564255 KPTNQ9Y664 436 aa1.75□□□□□ -2.13
CHD9-209ENST00000564255 ABCA7Q8IZY2 2146 aa1.75□□□□□ -2.13
CHD9-209ENST00000564255 NFASCO94856 1347 aa1.75□□□□□ -2.13
CHD9-209ENST00000564255 BRCA1P38398 1863 aaKnown RBP1.75□□□□□ -2.13
CHD9-209ENST00000564255 LOC100653049A0A140TA62 436 aa1.75□□□□□ -2.13
CHD9-209ENST00000564255 PANO1I0J062 215 aa1.75□□□□□ -2.13
CHD9-209ENST00000564255 GMDSO60547 372 aa1.75□□□□□ -2.13
CHD9-209ENST00000564255 SUPT3HO75486 399 aa1.75□□□□□ -2.13
CHD9-209ENST00000564255 HSBP1O75506 76 aa1.75□□□□□ -2.13
CHD9-209ENST00000564255 KRT34O76011 436 aa1.75□□□□□ -2.13
CHD9-209ENST00000564255 KRT16P08779 473 aa1.75□□□□□ -2.13
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms