RNA–Protein interactions for RNA: ENST00000563219.1

SHCBP1-202, Transcript of SHC binding and spindle associated 1, humanhuman

TSL 3

Gene SHCBP1, Length 485 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHCBP1-202ENST00000563219 PRSS16Q9NQE7 514 aa2.21□□□□□ -2.06
SHCBP1-202ENST00000563219 MMP26Q9NRE1 261 aa2.21□□□□□ -2.06
SHCBP1-202ENST00000563219 MCUBQ9NWR8 336 aa2.21□□□□□ -2.06
SHCBP1-202ENST00000563219 IFNKQ9P0W0 207 aa2.21□□□□□ -2.06
SHCBP1-202ENST00000563219 TRMT112Q9UI30 125 aaKnown RBP2.21□□□□□ -2.06
SHCBP1-202ENST00000563219 FLVCR2Q9UPI3 526 aa2.21□□□□□ -2.06
SHCBP1-202ENST00000563219 STK38LQ9Y2H1 464 aa2.21□□□□□ -2.06
SHCBP1-202ENST00000563219 COMMD3-BMI1R4GMX3 469 aa2.21□□□□□ -2.06
SHCBP1-202ENST00000563219 CENPJQ9HC77 1338 aaPredicted RBP2.2□□□□□ -2.06
SHCBP1-202ENST00000563219 A0A1W2PRD5 423 aa2.2□□□□□ -2.06
SHCBP1-202ENST00000563219 TSPAN11A1L157 253 aa2.2□□□□□ -2.06
SHCBP1-202ENST00000563219 FAM25EA8MYX2 175 aa2.2□□□□□ -2.06
SHCBP1-202ENST00000563219 H0YHG0 523 aa2.2□□□□□ -2.06
SHCBP1-202ENST00000563219 NME4O00746 187 aa2.2□□□□□ -2.06
SHCBP1-202ENST00000563219 RTL8CO15255 209 aa2.2□□□□□ -2.06
SHCBP1-202ENST00000563219 NVLO15381 856 aaKnown RBP2.2□□□□□ -2.06
SHCBP1-202ENST00000563219 GABARAPO95166 117 aa2.2□□□□□ -2.06
SHCBP1-202ENST00000563219 OXTP01178 125 aa2.2□□□□□ -2.06
SHCBP1-202ENST00000563219 IGLV1-47P01700 117 aa2.2□□□□□ -2.06
SHCBP1-202ENST00000563219 CRYGCP07315 174 aa2.2□□□□□ -2.06
SHCBP1-202ENST00000563219 CCDC172P0C7W6 258 aa2.2□□□□□ -2.06
SHCBP1-202ENST00000563219 ZNF17P17021 662 aa2.2□□□□□ -2.06
SHCBP1-202ENST00000563219 GABRG2P18507 467 aa2.2□□□□□ -2.06
SHCBP1-202ENST00000563219 CDKN2BP42772 138 aa2.2□□□□□ -2.06
SHCBP1-202ENST00000563219 RPS10P46783 165 aaKnown RBP2.2□□□□□ -2.06
SHCBP1-202ENST00000563219 DGCR6Q14129 220 aa2.2□□□□□ -2.06
SHCBP1-202ENST00000563219 RGNQ15493 299 aa2.2□□□□□ -2.06
SHCBP1-202ENST00000563219 TMEM183BQ1AE95 376 aa2.2□□□□□ -2.06
SHCBP1-202ENST00000563219 RSPO1Q2MKA7 263 aaPredicted RBP2.2□□□□□ -2.06
SHCBP1-202ENST00000563219 RPEL1Q2QD12 228 aa2.2□□□□□ -2.06
SHCBP1-202ENST00000563219 HNRNPA1L2Q32P51 320 aaKnown RBP2.2□□□□□ -2.06
SHCBP1-202ENST00000563219 COA6Q5JTJ3 125 aaKnown RBP2.2□□□□□ -2.06
SHCBP1-202ENST00000563219 STUMQ69YW2 141 aa2.2□□□□□ -2.06
SHCBP1-202ENST00000563219 ULK3Q6PHR2 472 aa2.2□□□□□ -2.06
SHCBP1-202ENST00000563219 HDDC2Q7Z4H3 204 aa2.2□□□□□ -2.06
SHCBP1-202ENST00000563219 TMEM183AQ8IXX5 376 aa2.2□□□□□ -2.06
SHCBP1-202ENST00000563219 FAM71AQ8IYT1 594 aa2.2□□□□□ -2.06
SHCBP1-202ENST00000563219 VKORC1L1Q8N0U8 176 aa2.2□□□□□ -2.06
SHCBP1-202ENST00000563219 KIF2BQ8N4N8 673 aa2.2□□□□□ -2.06
SHCBP1-202ENST00000563219 GPR26Q8NDV2 337 aa2.2□□□□□ -2.06
SHCBP1-202ENST00000563219 NPBQ8NG41 125 aa2.2□□□□□ -2.06
SHCBP1-202ENST00000563219 OR10AD1Q8NGE0 317 aa2.2□□□□□ -2.06
SHCBP1-202ENST00000563219 OR52E2Q8NGJ4 325 aa2.2□□□□□ -2.06
SHCBP1-202ENST00000563219 OR10G9Q8NGN4 311 aa2.2□□□□□ -2.06
SHCBP1-202ENST00000563219 MCOLN3Q8TDD5 553 aa2.2□□□□□ -2.06
SHCBP1-202ENST00000563219 RAB1CQ92928 201 aa2.2□□□□□ -2.06
SHCBP1-202ENST00000563219 NAT6Q93015 286 aa2.2□□□□□ -2.06
SHCBP1-202ENST00000563219 TMEM230Q96A57 120 aa2.2□□□□□ -2.06
SHCBP1-202ENST00000563219 C9orf72Q96LT7 481 aa2.2□□□□□ -2.06
SHCBP1-202ENST00000563219 OPALINQ96PE5 141 aa2.2□□□□□ -2.06
SHCBP1-202ENST00000563219 CSPG4P5Q96PW8 444 aa2.2□□□□□ -2.06
SHCBP1-202ENST00000563219 SH3GL3Q99963 347 aa2.2□□□□□ -2.06
SHCBP1-202ENST00000563219 CHID1Q9BWS9 393 aa2.2□□□□□ -2.06
SHCBP1-202ENST00000563219 PRRG3Q9BZD7 231 aa2.2□□□□□ -2.06
SHCBP1-202ENST00000563219 MRPL37Q9BZE1 423 aaKnown RBP2.2□□□□□ -2.06
SHCBP1-202ENST00000563219 AGPAT3Q9NRZ7 376 aa2.2□□□□□ -2.06
SHCBP1-202ENST00000563219 SLC39A1Q9NY26 324 aa2.2□□□□□ -2.06
SHCBP1-202ENST00000563219 ZNF226Q9NYT6 803 aa2.2□□□□□ -2.06
SHCBP1-202ENST00000563219 ADA2Q9NZK5 511 aa2.2□□□□□ -2.06
SHCBP1-202ENST00000563219 SLC17A7Q9P2U7 560 aa2.2□□□□□ -2.06
SHCBP1-202ENST00000563219 UVRAGQ9P2Y5 699 aa2.2□□□□□ -2.06
SHCBP1-202ENST00000563219 PRG3Q9Y2Y8 225 aaPredicted RBP2.2□□□□□ -2.06
SHCBP1-202ENST00000563219 BZW2Q9Y6E2 419 aaKnown RBP2.2□□□□□ -2.06
SHCBP1-202ENST00000563219 ARHGAP23Q9P227 1491 aa2.2□□□□□ -2.06
SHCBP1-202ENST00000563219 GAKO14976 1311 aa2.19□□□□□ -2.06
SHCBP1-202ENST00000563219 NEURL4Q96JN8 1562 aa2.19□□□□□ -2.06
SHCBP1-202ENST00000563219 AKNAQ7Z591 1439 aa2.19□□□□□ -2.06
SHCBP1-202ENST00000563219 IGLV1-36A0A0B4J1U3 117 aa2.19□□□□□ -2.06
SHCBP1-202ENST00000563219 A0A1B0GUH1 482 aa2.19□□□□□ -2.06
SHCBP1-202ENST00000563219 SYCE1LA8MT33 242 aa2.19□□□□□ -2.06
SHCBP1-202ENST00000563219 H0Y9J4 135 aa2.19□□□□□ -2.06
SHCBP1-202ENST00000563219 H7C417 338 aa2.19□□□□□ -2.06
SHCBP1-202ENST00000563219 PEX7O00628 323 aa2.19□□□□□ -2.06
SHCBP1-202ENST00000563219 TRDMT1O14717 391 aaKnown RBP2.19□□□□□ -2.06
SHCBP1-202ENST00000563219 ZNF861PO60384 105 aa2.19□□□□□ -2.06
SHCBP1-202ENST00000563219 NMT2O60551 498 aa2.19□□□□□ -2.06
SHCBP1-202ENST00000563219 TPM3P06753 285 aa2.19□□□□□ -2.06
SHCBP1-202ENST00000563219 PLEKP08567 350 aaPredicted RBP2.19□□□□□ -2.06
SHCBP1-202ENST00000563219 TDGF1P13385 188 aa2.19□□□□□ -2.06
SHCBP1-202ENST00000563219 IL32P24001 234 aa2.19□□□□□ -2.06
SHCBP1-202ENST00000563219 DRD3P35462 400 aa2.19□□□□□ -2.06
SHCBP1-202ENST00000563219 CXCL5P42830 114 aa2.19□□□□□ -2.06
SHCBP1-202ENST00000563219 NMUP48645 174 aa2.19□□□□□ -2.06
SHCBP1-202ENST00000563219 CYB561P49447 251 aa2.19□□□□□ -2.06
SHCBP1-202ENST00000563219 TDGF1P3P51864 188 aa2.19□□□□□ -2.06
SHCBP1-202ENST00000563219 ZNF138P52744 262 aa2.19□□□□□ -2.06
SHCBP1-202ENST00000563219 ATP5J2P56134 94 aa2.19□□□□□ -2.06
SHCBP1-202ENST00000563219 WNT4P56705 351 aa2.19□□□□□ -2.06
SHCBP1-202ENST00000563219 CACNG7P62955 275 aa2.19□□□□□ -2.06
SHCBP1-202ENST00000563219 PAFAH1B2P68402 229 aa2.19□□□□□ -2.06
SHCBP1-202ENST00000563219 GTF3C1Q12789 2109 aa2.19□□□□□ -2.06
SHCBP1-202ENST00000563219 TCP10Q12799 353 aa2.19□□□□□ -2.06
SHCBP1-202ENST00000563219 HSP90AA4PQ58FG1 418 aa2.19□□□□□ -2.06
SHCBP1-202ENST00000563219 HES5Q5TA89 166 aa2.19□□□□□ -2.06
SHCBP1-202ENST00000563219 SLC25A25Q6KCM7 469 aa2.19□□□□□ -2.06
SHCBP1-202ENST00000563219 TEX43Q6ZNM6 134 aa2.19□□□□□ -2.06
SHCBP1-202ENST00000563219 MBOAT2Q6ZWT7 520 aa2.19□□□□□ -2.06
SHCBP1-202ENST00000563219 COX15Q7KZN9 410 aa2.19□□□□□ -2.06
SHCBP1-202ENST00000563219 MTERF4Q7Z6M4 381 aaKnown RBP2.19□□□□□ -2.06
SHCBP1-202ENST00000563219 HORMAD1Q86X24 394 aa2.19□□□□□ -2.06
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms