RNA–Protein interactions for RNA: ENST00000562722.1

SF3B3-202, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 2

Gene SF3B3, Length 881 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-202ENST00000562722 ANKDD1AQ495B1 522 aa10.92□□□□□ -0.66
SF3B3-202ENST00000562722 COQ5Q5HYK3 327 aa10.92□□□□□ -0.66
SF3B3-202ENST00000562722 VASH1Q7L8A9 365 aaPredicted RBP10.92□□□□□ -0.66
SF3B3-202ENST00000562722 PCYOX1LQ8NBM8 494 aa10.92□□□□□ -0.66
SF3B3-202ENST00000562722 SLC7A6Q92536 515 aa10.92□□□□□ -0.66
SF3B3-202ENST00000562722 ZNF570Q96NI8 536 aa10.92□□□□□ -0.66
SF3B3-202ENST00000562722 WACQ9BTA9 647 aa10.92□□□□□ -0.66
SF3B3-202ENST00000562722 MRGBPQ9NV56 204 aa10.92□□□□□ -0.66
SF3B3-202ENST00000562722 GID8Q9NWU2 228 aa10.92□□□□□ -0.66
SF3B3-202ENST00000562722 PTTG3PQ9NZH4 202 aa10.92□□□□□ -0.66
SF3B3-202ENST00000562722 ASH2LQ9UBL3 628 aa10.92□□□□□ -0.66
SF3B3-202ENST00000562722 POLR1DQ9Y2S0 133 aa10.92□□□□□ -0.66
SF3B3-202ENST00000562722 POLR3KQ9Y2Y1 108 aaPredicted RBP10.92□□□□□ -0.66
SF3B3-202ENST00000562722 STARD10Q9Y365 291 aa10.92□□□□□ -0.66
SF3B3-202ENST00000562722 ARHGAP32A7KAX9 2087 aa10.91□□□□□ -0.66
SF3B3-202ENST00000562722 MGAM2Q2M2H8 2515 aa10.91□□□□□ -0.66
SF3B3-202ENST00000562722 TANC2Q9HCD6 1990 aa10.91□□□□□ -0.66
SF3B3-202ENST00000562722 LOC100653049A0A140TA62 436 aa10.91□□□□□ -0.66
SF3B3-202ENST00000562722 ELOVL7A1L3X0 281 aa10.91□□□□□ -0.66
SF3B3-202ENST00000562722 CEACAM18A8MTB9 384 aa10.91□□□□□ -0.66
SF3B3-202ENST00000562722 A8MXK9 166 aa10.91□□□□□ -0.66
SF3B3-202ENST00000562722 F5H0A9 414 aaPredicted RBP10.91□□□□□ -0.66
SF3B3-202ENST00000562722 TMEM178BH3BS89 294 aa10.91□□□□□ -0.66
SF3B3-202ENST00000562722 J3KTA2 159 aa10.91□□□□□ -0.66
SF3B3-202ENST00000562722 KRT34O76011 436 aa10.91□□□□□ -0.66
SF3B3-202ENST00000562722 ZNF205O95201 554 aa10.91□□□□□ -0.66
SF3B3-202ENST00000562722 GPANK1O95872 356 aa10.91□□□□□ -0.66
SF3B3-202ENST00000562722 RNASE1P07998 156 aaKnown RBP10.91□□□□□ -0.66
SF3B3-202ENST00000562722 CD14P08571 375 aa10.91□□□□□ -0.66
SF3B3-202ENST00000562722 ERFP50548 548 aa10.91□□□□□ -0.66
SF3B3-202ENST00000562722 IL13RA1P78552 427 aa10.91□□□□□ -0.66
SF3B3-202ENST00000562722 PRKCDQ05655 676 aa10.91□□□□□ -0.66
SF3B3-202ENST00000562722 OTPQ5XKR4 325 aa10.91□□□□□ -0.66
SF3B3-202ENST00000562722 RRM2BQ7LG56 351 aa10.91□□□□□ -0.66
SF3B3-202ENST00000562722 VTCN1Q7Z7D3 282 aa10.91□□□□□ -0.66
SF3B3-202ENST00000562722 JAZF1Q86VZ6 243 aa10.91□□□□□ -0.66
SF3B3-202ENST00000562722 OFCC1Q8IZS5 231 aa10.91□□□□□ -0.66
SF3B3-202ENST00000562722 PARP8Q8N3A8 854 aa10.91□□□□□ -0.66
SF3B3-202ENST00000562722 OR10AD1Q8NGE0 317 aa10.91□□□□□ -0.66
SF3B3-202ENST00000562722 PTP4A1Q93096 173 aa10.91□□□□□ -0.66
SF3B3-202ENST00000562722 HAVCR1Q96D42 359 aa10.91□□□□□ -0.66
SF3B3-202ENST00000562722 Q96M85 177 aa10.91□□□□□ -0.66
SF3B3-202ENST00000562722 C1orf147Q96MC9 270 aaPredicted RBP10.91□□□□□ -0.66
SF3B3-202ENST00000562722 ZNF48Q96MX3 618 aaPredicted RBP10.91□□□□□ -0.66
SF3B3-202ENST00000562722 SIGLEC11Q96RL6 698 aa10.91□□□□□ -0.66
SF3B3-202ENST00000562722 SSBP3Q9BWW4 388 aaPredicted RBP10.91□□□□□ -0.66
SF3B3-202ENST00000562722 GCM1Q9NP62 436 aa10.91□□□□□ -0.66
SF3B3-202ENST00000562722 IL20RAQ9UHF4 553 aa10.91□□□□□ -0.66
SF3B3-202ENST00000562722 LRCH1Q9Y2L9 728 aa10.91□□□□□ -0.66
SF3B3-202ENST00000562722 SNX13Q9Y5W8 968 aa10.91□□□□□ -0.66
SF3B3-202ENST00000562722 TEX13CA0A0J9YWL9 993 aa10.9□□□□□ -0.66
SF3B3-202ENST00000562722 IGHV3-64DA0A0J9YX35 117 aa10.9□□□□□ -0.66
SF3B3-202ENST00000562722 PRSS37A4D1T9 235 aa10.9□□□□□ -0.66
SF3B3-202ENST00000562722 LRRC30A6NM36 301 aa10.9□□□□□ -0.66
SF3B3-202ENST00000562722 IFNL4K9M1U5 179 aa10.9□□□□□ -0.66
SF3B3-202ENST00000562722 GSTA4O15217 222 aa10.9□□□□□ -0.66
SF3B3-202ENST00000562722 SLC16A7O60669 478 aa10.9□□□□□ -0.66
SF3B3-202ENST00000562722 CYB5R3P00387 301 aaPredicted RBP10.9□□□□□ -0.66
SF3B3-202ENST00000562722 IGHV4-38-2P0DP08 117 aa10.9□□□□□ -0.66
SF3B3-202ENST00000562722 TROVE2P10155 538 aaKnown RBP eCLIP10.9□□□□□ -0.66
SF3B3-202ENST00000562722 CTLA4P16410 223 aa10.9□□□□□ -0.66
SF3B3-202ENST00000562722 FUT4P22083 530 aa10.9□□□□□ -0.66
SF3B3-202ENST00000562722 CD80P33681 288 aa10.9□□□□□ -0.66
SF3B3-202ENST00000562722 CENPAP49450 140 aa10.9□□□□□ -0.66
SF3B3-202ENST00000562722 SRP9P49458 86 aaKnown RBP10.9□□□□□ -0.66
SF3B3-202ENST00000562722 GNB2P62879 340 aa10.9□□□□□ -0.66
SF3B3-202ENST00000562722 KLF10Q13118 480 aa10.9□□□□□ -0.66
SF3B3-202ENST00000562722 HLXQ14774 488 aaPredicted RBP10.9□□□□□ -0.66
SF3B3-202ENST00000562722 SLC9A3R2Q15599 337 aa10.9□□□□□ -0.66
SF3B3-202ENST00000562722 ZBED5Q49AG3 693 aa10.9□□□□□ -0.66
SF3B3-202ENST00000562722 MESTQ5EB52 335 aa10.9□□□□□ -0.66
SF3B3-202ENST00000562722 OR2T2Q6IF00 324 aa10.9□□□□□ -0.66
SF3B3-202ENST00000562722 SLC27A4Q6P1M0 643 aa10.9□□□□□ -0.66
SF3B3-202ENST00000562722 TBPL2Q6SJ96 375 aa10.9□□□□□ -0.66
SF3B3-202ENST00000562722 LRRN1Q6UXK5 716 aa10.9□□□□□ -0.66
SF3B3-202ENST00000562722 TREML4Q6UXN2 200 aa10.9□□□□□ -0.66
SF3B3-202ENST00000562722 MBOAT2Q6ZWT7 520 aa10.9□□□□□ -0.66
SF3B3-202ENST00000562722 FKBP9P1Q75LS8 142 aa10.9□□□□□ -0.66
SF3B3-202ENST00000562722 SPATC1Q76KD6 591 aa10.9□□□□□ -0.66
SF3B3-202ENST00000562722 ZSCAN2Q7Z7L9 614 aaPredicted RBP10.9□□□□□ -0.66
SF3B3-202ENST00000562722 GLB1L2Q8IW92 636 aa10.9□□□□□ -0.66
SF3B3-202ENST00000562722 RNF113BQ8IZP6 322 aaKnown RBP10.9□□□□□ -0.66
SF3B3-202ENST00000562722 OR5L1Q8NGL2 311 aa10.9□□□□□ -0.66
SF3B3-202ENST00000562722 OR1F12Q8NHA8 337 aa10.9□□□□□ -0.66
SF3B3-202ENST00000562722 ZNF420Q8TAQ5 688 aaPredicted RBP10.9□□□□□ -0.66
SF3B3-202ENST00000562722 ACOT11Q8WXI4 607 aaPredicted RBP10.9□□□□□ -0.66
SF3B3-202ENST00000562722 PLEKHA8Q96JA3 519 aa10.9□□□□□ -0.66
SF3B3-202ENST00000562722 ZNF582Q96NG8 517 aaPredicted RBP10.9□□□□□ -0.66
SF3B3-202ENST00000562722 A0A087WUU8 490 aa10.89□□□□□ -0.67
SF3B3-202ENST00000562722 TRAV40A0A0B4J280 105 aa10.89□□□□□ -0.67
SF3B3-202ENST00000562722 CDC42EP2O14613 210 aa10.89□□□□□ -0.67
SF3B3-202ENST00000562722 AHCYL1O43865 530 aa10.89□□□□□ -0.67
SF3B3-202ENST00000562722 KHDRBS3O75525 346 aaKnown RBP10.89□□□□□ -0.67
SF3B3-202ENST00000562722 WNT2P09544 360 aa10.89□□□□□ -0.67
SF3B3-202ENST00000562722 RAC2P15153 192 aa10.89□□□□□ -0.67
SF3B3-202ENST00000562722 RGS6P49758 472 aa10.89□□□□□ -0.67
SF3B3-202ENST00000562722 PAX8Q06710 450 aa10.89□□□□□ -0.67
SF3B3-202ENST00000562722 KRR1Q13601 381 aaKnown RBP10.89□□□□□ -0.67
SF3B3-202ENST00000562722 FHL1Q13642 323 aa10.89□□□□□ -0.67
SF3B3-202ENST00000562722 IFI44LQ53G44 452 aa10.89□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms