RNA–Protein interactions for RNA: ENST00000562626.1

CLK3-208, Transcript of CDC like kinase 3, humanhuman

TSL 2

Gene CLK3, Length 812 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-208ENST00000562626 RADILQ96JH8 1075 aa8.45□□□□□ -1.06
CLK3-208ENST00000562626 INTS14Q96SY0 518 aa8.45□□□□□ -1.06
CLK3-208ENST00000562626 TEAD3Q99594 435 aa8.45□□□□□ -1.06
CLK3-208ENST00000562626 TTTY10Q9BZA0 68 aa8.45□□□□□ -1.06
CLK3-208ENST00000562626 ADGRL4Q9HBW9 690 aa8.45□□□□□ -1.06
CLK3-208ENST00000562626 NGBQ9NPG2 151 aa8.45□□□□□ -1.06
CLK3-208ENST00000562626 ENOPH1Q9UHY7 261 aa8.45□□□□□ -1.06
CLK3-208ENST00000562626 COPS3Q9UNS2 423 aa8.45□□□□□ -1.06
CLK3-208ENST00000562626 POLR1DQ9Y2S0 133 aa8.45□□□□□ -1.06
CLK3-208ENST00000562626 TIMM10BQ9Y5J6 103 aa8.45□□□□□ -1.06
CLK3-208ENST00000562626 GMPPBQ9Y5P6 360 aa8.45□□□□□ -1.06
CLK3-208ENST00000562626 DYSFO75923 2080 aa8.44□□□□□ -1.06
CLK3-208ENST00000562626 HS3ST1O14792 307 aa8.44□□□□□ -1.06
CLK3-208ENST00000562626 MAGEB4O15481 346 aaPredicted RBP8.44□□□□□ -1.06
CLK3-208ENST00000562626 WBP4O75554 376 aaKnown RBP8.44□□□□□ -1.06
CLK3-208ENST00000562626 GOSR1O95249 250 aa8.44□□□□□ -1.06
CLK3-208ENST00000562626 NGFP01138 241 aa8.44□□□□□ -1.06
CLK3-208ENST00000562626 CD8AP01732 235 aa8.44□□□□□ -1.06
CLK3-208ENST00000562626 SOD3P08294 240 aa8.44□□□□□ -1.06
CLK3-208ENST00000562626 ADRA2AP08913 450 aa8.44□□□□□ -1.06
CLK3-208ENST00000562626 DANCRP0C864 163 aa8.44□□□□□ -1.06
CLK3-208ENST00000562626 STOMP27105 288 aa8.44□□□□□ -1.06
CLK3-208ENST00000562626 THBS4P35443 961 aa8.44□□□□□ -1.06
CLK3-208ENST00000562626 HTR5AP47898 357 aa8.44□□□□□ -1.06
CLK3-208ENST00000562626 RPS7P62081 194 aaKnown RBP8.44□□□□□ -1.06
CLK3-208ENST00000562626 SCRN3Q0VDG4 424 aa8.44□□□□□ -1.06
CLK3-208ENST00000562626 SNTB2Q13425 540 aaKnown RBP8.44□□□□□ -1.06
CLK3-208ENST00000562626 RAB35Q15286 201 aa8.44□□□□□ -1.06
CLK3-208ENST00000562626 SMN1Q16637 294 aaKnown RBP8.44□□□□□ -1.06
CLK3-208ENST00000562626 KRTAP27-1Q3LI81 207 aa8.44□□□□□ -1.06
CLK3-208ENST00000562626 ELFN2Q5R3F8 820 aa8.44□□□□□ -1.06
CLK3-208ENST00000562626 C1QTNF12Q5T7M4 302 aa8.44□□□□□ -1.06
CLK3-208ENST00000562626 ZNF691Q5VV52 312 aa8.44□□□□□ -1.06
CLK3-208ENST00000562626 NXNL2Q5VZ03 156 aa8.44□□□□□ -1.06
CLK3-208ENST00000562626 VHLLQ6RSH7 139 aa8.44□□□□□ -1.06
CLK3-208ENST00000562626 MEPCEQ7L2J0 689 aaKnown RBP8.44□□□□□ -1.06
CLK3-208ENST00000562626 SSX8Q7RTT4 187 aa8.44□□□□□ -1.06
CLK3-208ENST00000562626 DCXRQ7Z4W1 244 aa8.44□□□□□ -1.06
CLK3-208ENST00000562626 LRP11Q86VZ4 500 aa8.44□□□□□ -1.06
CLK3-208ENST00000562626 OR10H5Q8NGA6 315 aa8.44□□□□□ -1.06
CLK3-208ENST00000562626 OR8J1Q8NGP2 316 aa8.44□□□□□ -1.06
CLK3-208ENST00000562626 OR6N2Q8NGY6 317 aa8.44□□□□□ -1.06
CLK3-208ENST00000562626 OR1F12Q8NHA8 337 aa8.44□□□□□ -1.06
CLK3-208ENST00000562626 TMEM171Q8WVE6 324 aa8.44□□□□□ -1.06
CLK3-208ENST00000562626 CYGBQ8WWM9 190 aa8.44□□□□□ -1.06
CLK3-208ENST00000562626 ADI1Q9BV57 179 aa8.44□□□□□ -1.06
CLK3-208ENST00000562626 KCNN2Q9H2S1 579 aa8.44□□□□□ -1.06
CLK3-208ENST00000562626 PLEK2Q9NYT0 353 aa8.44□□□□□ -1.06
CLK3-208ENST00000562626 CISD1Q9NZ45 108 aaKnown RBP8.44□□□□□ -1.06
CLK3-208ENST00000562626 MYEF2Q9P2K5 600 aaKnown RBP8.44□□□□□ -1.06
CLK3-208ENST00000562626 FZR1Q9UM11 496 aa8.44□□□□□ -1.06
CLK3-208ENST00000562626 PLEKHA6Q9Y2H5 1048 aa8.44□□□□□ -1.06
CLK3-208ENST00000562626 ATP23Q9Y6H3 246 aa8.44□□□□□ -1.06
CLK3-208ENST00000562626 SETD2Q9BYW2 2564 aaPredicted RBP8.44□□□□□ -1.06
CLK3-208ENST00000562626 IQCMA0A1B0GVH7 501 aa8.43□□□□□ -1.06
CLK3-208ENST00000562626 TMEM129A0AVI4 362 aa8.43□□□□□ -1.06
CLK3-208ENST00000562626 C5orf49A4QMS7 147 aa8.43□□□□□ -1.06
CLK3-208ENST00000562626 SMPD2O60906 423 aa8.43□□□□□ -1.06
CLK3-208ENST00000562626 CRYAAP02489 173 aa8.43□□□□□ -1.06
CLK3-208ENST00000562626 ZNF823P16415 610 aa8.43□□□□□ -1.06
CLK3-208ENST00000562626 CCNOP22674 350 aa8.43□□□□□ -1.06
CLK3-208ENST00000562626 NR4A1P22736 598 aa8.43□□□□□ -1.06
CLK3-208ENST00000562626 GUCA1AP43080 201 aaPredicted RBP8.43□□□□□ -1.06
CLK3-208ENST00000562626 NUDT6P53370 316 aa8.43□□□□□ -1.06
CLK3-208ENST00000562626 PRSS12P56730 875 aa8.43□□□□□ -1.06
CLK3-208ENST00000562626 CDC42P60953 191 aa8.43□□□□□ -1.06
CLK3-208ENST00000562626 PCBD1P61457 104 aa8.43□□□□□ -1.06
CLK3-208ENST00000562626 SNRPGP62308 76 aaKnown RBP8.43□□□□□ -1.06
CLK3-208ENST00000562626 KEAP1Q14145 624 aa8.43□□□□□ -1.06
CLK3-208ENST00000562626 EIF2B1Q14232 305 aaKnown RBP8.43□□□□□ -1.06
CLK3-208ENST00000562626 GGTLC2Q14390 218 aa8.43□□□□□ -1.06
CLK3-208ENST00000562626 MAD2L1BPQ15013 274 aaPredicted RBP8.43□□□□□ -1.06
CLK3-208ENST00000562626 ADIPOQQ15848 244 aa8.43□□□□□ -1.06
CLK3-208ENST00000562626 MST1LQ2TV78 715 aa8.43□□□□□ -1.06
CLK3-208ENST00000562626 TEX30Q5JUR7 227 aa8.43□□□□□ -1.06
CLK3-208ENST00000562626 SLC35D3Q5M8T2 416 aa8.43□□□□□ -1.06
CLK3-208ENST00000562626 C6orf52Q5T4I8 152 aa8.43□□□□□ -1.06
CLK3-208ENST00000562626 PAMR1Q6UXH9 720 aa8.43□□□□□ -1.06
CLK3-208ENST00000562626 USP51Q70EK9 711 aa8.43□□□□□ -1.06
CLK3-208ENST00000562626 SSX6Q7RTT6 188 aa8.43□□□□□ -1.06
CLK3-208ENST00000562626 DPPA2Q7Z7J5 298 aa8.43□□□□□ -1.06
CLK3-208ENST00000562626 GJC3Q8NFK1 279 aa8.43□□□□□ -1.06
CLK3-208ENST00000562626 OR4F15Q8NGB8 312 aa8.43□□□□□ -1.06
CLK3-208ENST00000562626 RHOXF1Q8NHV9 184 aa8.43□□□□□ -1.06
CLK3-208ENST00000562626 CNIH3Q8TBE1 160 aa8.43□□□□□ -1.06
CLK3-208ENST00000562626 SLAMF6Q96DU3 332 aa8.43□□□□□ -1.06
CLK3-208ENST00000562626 RDH12Q96NR8 316 aa8.43□□□□□ -1.06
CLK3-208ENST00000562626 RHNO1Q9BSD3 238 aa8.43□□□□□ -1.06
CLK3-208ENST00000562626 ABHD6Q9BV23 337 aa8.43□□□□□ -1.06
CLK3-208ENST00000562626 CDH20Q9HBT6 801 aa8.43□□□□□ -1.06
CLK3-208ENST00000562626 AMBNQ9NP70 447 aa8.43□□□□□ -1.06
CLK3-208ENST00000562626 IMPAD1Q9NX62 359 aa8.43□□□□□ -1.06
CLK3-208ENST00000562626 FBXL3Q9UKT7 428 aa8.43□□□□□ -1.06
CLK3-208ENST00000562626 PCDHGB5Q9Y5G0 923 aa8.43□□□□□ -1.06
CLK3-208ENST00000562626 DNHD1Q96M86 4753 aa8.43□□□□□ -1.06
CLK3-208ENST00000562626 PSMD9O00233 223 aa8.42□□□□□ -1.06
CLK3-208ENST00000562626 ATE1O95260 518 aa8.42□□□□□ -1.06
CLK3-208ENST00000562626 CLPTM1O96005 669 aa8.42□□□□□ -1.06
CLK3-208ENST00000562626 COX5BP10606 129 aa8.42□□□□□ -1.06
CLK3-208ENST00000562626 CD53P19397 219 aa8.42□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms