RNA–Protein interactions for RNA: ENST00000562389.5

CLK3-207, Transcript of CDC like kinase 3, humanhuman

TSL 4

Gene CLK3, Length 572 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-207ENST00000562389 ELFN2Q5R3F8 820 aa14.39□□□□□ -0.11
CLK3-207ENST00000562389 SLX4IPQ5VYV7 408 aa14.39□□□□□ -0.11
CLK3-207ENST00000562389 RGS7BPQ6MZT1 257 aaPredicted RBP14.39□□□□□ -0.11
CLK3-207ENST00000562389 PLBD1Q6P4A8 553 aa14.39□□□□□ -0.11
CLK3-207ENST00000562389 CORO6Q6QEF8 472 aa14.39□□□□□ -0.11
CLK3-207ENST00000562389 PRSS57Q6UWY2 283 aa14.39□□□□□ -0.11
CLK3-207ENST00000562389 UNQ6126/PRO20091Q6UXV3 157 aa14.39□□□□□ -0.11
CLK3-207ENST00000562389 LINC00346Q8IVM7 164 aa14.39□□□□□ -0.11
CLK3-207ENST00000562389 C1orf174Q8IYL3 243 aa14.39□□□□□ -0.11
CLK3-207ENST00000562389 OR6K6Q8NGW6 343 aa14.39□□□□□ -0.11
CLK3-207ENST00000562389 OR2AJ1Q8NGZ0 328 aa14.39□□□□□ -0.11
CLK3-207ENST00000562389 STMN2Q93045 179 aa14.39□□□□□ -0.11
CLK3-207ENST00000562389 COQ7Q99807 217 aa14.39□□□□□ -0.11
CLK3-207ENST00000562389 MRPL37Q9BZE1 423 aaKnown RBP14.39□□□□□ -0.11
CLK3-207ENST00000562389 HINT3Q9NQE9 182 aaKnown RBP14.39□□□□□ -0.11
CLK3-207ENST00000562389 TVP23BQ9NYZ1 205 aa14.39□□□□□ -0.11
CLK3-207ENST00000562389 EIF3KQ9UBQ5 218 aaKnown RBP14.39□□□□□ -0.11
CLK3-207ENST00000562389 GDF2Q9UK05 429 aaPredicted RBP14.39□□□□□ -0.11
CLK3-207ENST00000562389 PMF1-BGLAPU3KQ54 211 aa14.39□□□□□ -0.11
CLK3-207ENST00000562389 TMEM129A0AVI4 362 aa14.38□□□□□ -0.11
CLK3-207ENST00000562389 PRODHO43272 600 aa14.38□□□□□ -0.11
CLK3-207ENST00000562389 ALPLP05186 524 aa14.38□□□□□ -0.11
CLK3-207ENST00000562389 LCKP06239 509 aa14.38□□□□□ -0.11
CLK3-207ENST00000562389 EPHA2P29317 976 aa14.38□□□□□ -0.11
CLK3-207ENST00000562389 ENTPD1P49961 510 aa14.38□□□□□ -0.11
CLK3-207ENST00000562389 PPOXP50336 477 aa14.38□□□□□ -0.11
CLK3-207ENST00000562389 ALDH3A2P51648 485 aa14.38□□□□□ -0.11
CLK3-207ENST00000562389 TEX30Q5JUR7 227 aa14.38□□□□□ -0.11
CLK3-207ENST00000562389 SLC35D3Q5M8T2 416 aa14.38□□□□□ -0.11
CLK3-207ENST00000562389 Q5PR19 223 aa14.38□□□□□ -0.11
CLK3-207ENST00000562389 C12orf73Q69YU5 71 aa14.38□□□□□ -0.11
CLK3-207ENST00000562389 ARL9Q6T311 187 aa14.38□□□□□ -0.11
CLK3-207ENST00000562389 CFAP77Q6ZQR2 320 aa14.38□□□□□ -0.11
CLK3-207ENST00000562389 CXXC5Q7LFL8 322 aaKnown RBP14.38□□□□□ -0.11
CLK3-207ENST00000562389 CPOQ8IVL8 374 aa14.38□□□□□ -0.11
CLK3-207ENST00000562389 ZNF101Q8IZC7 436 aa14.38□□□□□ -0.11
CLK3-207ENST00000562389 ZNF511Q8NB15 262 aa14.38□□□□□ -0.11
CLK3-207ENST00000562389 OTULINQ96BN8 352 aa14.38□□□□□ -0.11
CLK3-207ENST00000562389 C4orf45Q96LM5 186 aa14.38□□□□□ -0.11
CLK3-207ENST00000562389 DCLRE1CQ96SD1 692 aaKnown RBP14.38□□□□□ -0.11
CLK3-207ENST00000562389 DOK1Q99704 481 aa14.38□□□□□ -0.11
CLK3-207ENST00000562389 OR51V1Q9H2C8 321 aa14.38□□□□□ -0.11
CLK3-207ENST00000562389 OR51B6Q9H340 312 aa14.38□□□□□ -0.11
CLK3-207ENST00000562389 WDR76Q9H967 626 aa14.38□□□□□ -0.11
CLK3-207ENST00000562389 MARCH7Q9H992 704 aa14.38□□□□□ -0.11
CLK3-207ENST00000562389 ELOVL3Q9HB03 270 aa14.38□□□□□ -0.11
CLK3-207ENST00000562389 EI24O14681 340 aa14.37□□□□□ -0.11
CLK3-207ENST00000562389 PSKH1P11801 424 aa14.37□□□□□ -0.11
CLK3-207ENST00000562389 ZNF250P15622 560 aa14.37□□□□□ -0.11
CLK3-207ENST00000562389 SLC2A5P22732 501 aa14.37□□□□□ -0.11
CLK3-207ENST00000562389 ERVS71-1P61550 626 aa14.37□□□□□ -0.11
CLK3-207ENST00000562389 RFPL4BQ6ZWI9 263 aa14.37□□□□□ -0.11
CLK3-207ENST00000562389 LURAP1LQ8IV03 231 aa14.37□□□□□ -0.11
CLK3-207ENST00000562389 OR1J1Q8NGS3 322 aa14.37□□□□□ -0.11
CLK3-207ENST00000562389 IPCEF1Q8WWN9 437 aaPredicted RBP14.37□□□□□ -0.11
CLK3-207ENST00000562389 C9orf16Q9BUW7 83 aa14.37□□□□□ -0.11
CLK3-207ENST00000562389 BARX1Q9HBU1 254 aaPredicted RBP14.37□□□□□ -0.11
CLK3-207ENST00000562389 PNRC2Q9NPJ4 139 aaKnown RBP14.37□□□□□ -0.11
CLK3-207ENST00000562389 TBCCD1Q9NVR7 557 aa14.37□□□□□ -0.11
CLK3-207ENST00000562389 ORC6Q9Y5N6 252 aa14.37□□□□□ -0.11
CLK3-207ENST00000562389 IGLV3-9A0A075B6K5 115 aa14.36□□□□□ -0.11
CLK3-207ENST00000562389 ANKRD65E5RJM6 399 aa14.36□□□□□ -0.11
CLK3-207ENST00000562389 H3BSA7 217 aa14.36□□□□□ -0.11
CLK3-207ENST00000562389 PRKYO43930 277 aa14.36□□□□□ -0.11
CLK3-207ENST00000562389 ABHD16AO95870 558 aa14.36□□□□□ -0.11
CLK3-207ENST00000562389 IGHV4-39P01824 125 aa14.36□□□□□ -0.11
CLK3-207ENST00000562389 GSTT1P30711 240 aa14.36□□□□□ -0.11
CLK3-207ENST00000562389 RPS27P42677 84 aaKnown RBP14.36□□□□□ -0.11
CLK3-207ENST00000562389 EFNB1P98172 346 aa14.36□□□□□ -0.11
CLK3-207ENST00000562389 ECH1Q13011 328 aa14.36□□□□□ -0.11
CLK3-207ENST00000562389 KRTAP27-1Q3LI81 207 aa14.36□□□□□ -0.11
CLK3-207ENST00000562389 CBR4Q8N4T8 237 aa14.36□□□□□ -0.11
CLK3-207ENST00000562389 BBS1Q8NFJ9 593 aa14.36□□□□□ -0.11
CLK3-207ENST00000562389 ABHD4Q8TB40 342 aa14.36□□□□□ -0.11
CLK3-207ENST00000562389 SLC7A6Q92536 515 aa14.36□□□□□ -0.11
CLK3-207ENST00000562389 MAP6Q96JE9 813 aa14.36□□□□□ -0.11
CLK3-207ENST00000562389 INTS14Q96SY0 518 aa14.36□□□□□ -0.11
CLK3-207ENST00000562389 PITX2Q99697 317 aa14.36□□□□□ -0.11
CLK3-207ENST00000562389 ATF6BQ99941 703 aa14.36□□□□□ -0.11
CLK3-207ENST00000562389 SYT3Q9BQG1 590 aa14.36□□□□□ -0.11
CLK3-207ENST00000562389 RIBC2Q9H4K1 309 aa14.36□□□□□ -0.11
CLK3-207ENST00000562389 J3QW42 95 aa14.35□□□□□ -0.11
CLK3-207ENST00000562389 ZNF593O00488 134 aaPredicted RBP14.35□□□□□ -0.11
CLK3-207ENST00000562389 NDUFS7O75251 213 aa14.35□□□□□ -0.11
CLK3-207ENST00000562389 BAG2O95816 211 aa14.35□□□□□ -0.11
CLK3-207ENST00000562389 NGFP01138 241 aa14.35□□□□□ -0.11
CLK3-207ENST00000562389 DBHP09172 617 aa14.35□□□□□ -0.11
CLK3-207ENST00000562389 SPARCP09486 303 aa14.35□□□□□ -0.11
CLK3-207ENST00000562389 TUBG1P23258 451 aa14.35□□□□□ -0.11
CLK3-207ENST00000562389 POLR2IP36954 125 aaKnown RBP14.35□□□□□ -0.11
CLK3-207ENST00000562389 RGS6P49758 472 aa14.35□□□□□ -0.11
CLK3-207ENST00000562389 RAD23AP54725 363 aa14.35□□□□□ -0.11
CLK3-207ENST00000562389 PPP1CBP62140 327 aa14.35□□□□□ -0.11
CLK3-207ENST00000562389 KLHL12Q53G59 568 aa14.35□□□□□ -0.11
CLK3-207ENST00000562389 MBNL2Q5VZF2 373 aaKnown RBP14.35□□□□□ -0.11
CLK3-207ENST00000562389 TMEM154Q6P9G4 183 aa14.35□□□□□ -0.11
CLK3-207ENST00000562389 DCXRQ7Z4W1 244 aa14.35□□□□□ -0.11
CLK3-207ENST00000562389 LRP11Q86VZ4 500 aa14.35□□□□□ -0.11
CLK3-207ENST00000562389 TGIF2LYQ8IUE0 185 aa14.35□□□□□ -0.11
CLK3-207ENST00000562389 ERI1Q8IV48 349 aaKnown RBP14.35□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 60.3 ms