RNA–Protein interactions for RNA: ENST00000561436.1

HERC1-215, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 4

Gene HERC1, Length 551 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-215ENST00000561436 UGT1A10Q9HAW8 530 aa2.83□□□□□ -1.96
HERC1-215ENST00000561436 UGT1A8Q9HAW9 530 aa2.83□□□□□ -1.96
HERC1-215ENST00000561436 SPATA7Q9P0W8 599 aa2.83□□□□□ -1.96
HERC1-215ENST00000561436 RNF14Q9UBS8 474 aa2.83□□□□□ -1.96
HERC1-215ENST00000561436 B4GALT7Q9UBV7 327 aa2.83□□□□□ -1.96
HERC1-215ENST00000561436 ANAPC7Q9UJX3 599 aa2.83□□□□□ -1.96
HERC1-215ENST00000561436 PSMD13Q9UNM6 376 aa2.83□□□□□ -1.96
HERC1-215ENST00000561436 SAMD4AQ9UPU9 718 aaKnown RBP2.83□□□□□ -1.96
HERC1-215ENST00000561436 ASF1AQ9Y294 204 aa2.83□□□□□ -1.96
HERC1-215ENST00000561436 FLVCR1Q9Y5Y0 555 aa2.83□□□□□ -1.96
HERC1-215ENST00000561436 ANAPC1Q9H1A4 1944 aa2.83□□□□□ -1.96
HERC1-215ENST00000561436 ATMQ13315 3056 aa2.83□□□□□ -1.96
HERC1-215ENST00000561436 MGAQ8IWI9 3026 aa2.82□□□□□ -1.96
HERC1-215ENST00000561436 MYO16Q9Y6X6 1858 aa2.82□□□□□ -1.96
HERC1-215ENST00000561436 TP53BP1Q12888 1972 aaPredicted RBP2.82□□□□□ -1.96
HERC1-215ENST00000561436 A0A1B0GVY2 172 aa2.82□□□□□ -1.96
HERC1-215ENST00000561436 SAGE2PA6NJ88 616 aa2.82□□□□□ -1.96
HERC1-215ENST00000561436 ZSCAN5BA6NJL1 495 aa2.82□□□□□ -1.96
HERC1-215ENST00000561436 SRRM5B3KS81 715 aa2.82□□□□□ -1.96
HERC1-215ENST00000561436 C19orf84I3L1E1 186 aa2.82□□□□□ -1.96
HERC1-215ENST00000561436 AP3B1O00203 1094 aa2.82□□□□□ -1.96
HERC1-215ENST00000561436 PFDN6O15212 129 aa2.82□□□□□ -1.96
HERC1-215ENST00000561436 HCN1O60741 890 aa2.82□□□□□ -1.96
HERC1-215ENST00000561436 ALOX12BO75342 701 aa2.82□□□□□ -1.96
HERC1-215ENST00000561436 BCAS1O75363 584 aaPredicted RBP2.82□□□□□ -1.96
HERC1-215ENST00000561436 IGHG3P01860 377 aa2.82□□□□□ -1.96
HERC1-215ENST00000561436 THY1P04216 161 aa2.82□□□□□ -1.96
HERC1-215ENST00000561436 UQCRHP07919 91 aa2.82□□□□□ -1.96
HERC1-215ENST00000561436 SLC35E2P0CK97 266 aa2.82□□□□□ -1.96
HERC1-215ENST00000561436 BCL3P20749 454 aa2.82□□□□□ -1.96
HERC1-215ENST00000561436 SERPINA2P20848 420 aa2.82□□□□□ -1.96
HERC1-215ENST00000561436 TBXA2RP21731 343 aa2.82□□□□□ -1.96
HERC1-215ENST00000561436 PTBP1P26599 531 aaKnown RBP eCLIP2.82□□□□□ -1.96
HERC1-215ENST00000561436 GDF1P27539 372 aa2.82□□□□□ -1.96
HERC1-215ENST00000561436 CMPK1P30085 196 aa2.82□□□□□ -1.96
HERC1-215ENST00000561436 CYB561P49447 251 aa2.82□□□□□ -1.96
HERC1-215ENST00000561436 HLCSP50747 726 aa2.82□□□□□ -1.96
HERC1-215ENST00000561436 HSD17B7P56937 341 aa2.82□□□□□ -1.96
HERC1-215ENST00000561436 RPL8P62917 257 aaKnown RBP2.82□□□□□ -1.96
HERC1-215ENST00000561436 RIPPLY1Q0D2K3 151 aa2.82□□□□□ -1.96
HERC1-215ENST00000561436 PJVKQ0ZLH3 352 aa2.82□□□□□ -1.96
HERC1-215ENST00000561436 KCNJ11Q14654 390 aa2.82□□□□□ -1.96
HERC1-215ENST00000561436 TMED2Q15363 201 aa2.82□□□□□ -1.96
HERC1-215ENST00000561436 CHI3L2Q15782 390 aa2.82□□□□□ -1.96
HERC1-215ENST00000561436 DEFB113Q30KQ7 82 aa2.82□□□□□ -1.96
HERC1-215ENST00000561436 TFDP3Q5H9I0 405 aa2.82□□□□□ -1.96
HERC1-215ENST00000561436 SLC22A10Q63ZE4 541 aa2.82□□□□□ -1.96
HERC1-215ENST00000561436 OR5M10Q6IEU7 315 aa2.82□□□□□ -1.96
HERC1-215ENST00000561436 ACSM5Q6NUN0 579 aa2.82□□□□□ -1.96
HERC1-215ENST00000561436 FAHD2BQ6P2I3 314 aaPredicted RBP2.82□□□□□ -1.96
HERC1-215ENST00000561436 PAMR1Q6UXH9 720 aa2.82□□□□□ -1.96
HERC1-215ENST00000561436 PID1Q7Z2X4 250 aa2.82□□□□□ -1.96
HERC1-215ENST00000561436 ZNF571Q7Z3V5 609 aaPredicted RBP2.82□□□□□ -1.96
HERC1-215ENST00000561436 SLC13A5Q86YT5 568 aaPredicted RBP2.82□□□□□ -1.96
HERC1-215ENST00000561436 DHRSXQ8N5I4 330 aa2.82□□□□□ -1.96
HERC1-215ENST00000561436 CLDN19Q8N6F1 224 aa2.82□□□□□ -1.96
HERC1-215ENST00000561436 C15orf54Q8N8G6 183 aa2.82□□□□□ -1.96
HERC1-215ENST00000561436 ZFP62Q8NB50 900 aaPredicted RBP2.82□□□□□ -1.96
HERC1-215ENST00000561436 SYT14Q8NB59 555 aa2.82□□□□□ -1.96
HERC1-215ENST00000561436 PLPP5Q8NEB5 264 aa2.82□□□□□ -1.96
HERC1-215ENST00000561436 CNIH3Q8TBE1 160 aa2.82□□□□□ -1.96
HERC1-215ENST00000561436 TRMT10AQ8TBZ6 339 aaKnown RBP2.82□□□□□ -1.96
HERC1-215ENST00000561436 BLOC1S5Q8TDH9 187 aa2.82□□□□□ -1.96
HERC1-215ENST00000561436 RERGQ96A58 199 aaPredicted RBP2.82□□□□□ -1.96
HERC1-215ENST00000561436 FAHD2AQ96GK7 314 aa2.82□□□□□ -1.96
HERC1-215ENST00000561436 FOPNLQ96NB1 174 aa2.82□□□□□ -1.96
HERC1-215ENST00000561436 ALS2CR12Q96Q35 445 aa2.82□□□□□ -1.96
HERC1-215ENST00000561436 SMIM14Q96QK8 99 aa2.82□□□□□ -1.96
HERC1-215ENST00000561436 OR5B2Q96R09 309 aa2.82□□□□□ -1.96
HERC1-215ENST00000561436 CYTH2Q99418 400 aa2.82□□□□□ -1.96
HERC1-215ENST00000561436 BPIFA3Q9BQP9 254 aa2.82□□□□□ -1.96
HERC1-215ENST00000561436 TMEM121Q9BTD3 319 aa2.82□□□□□ -1.96
HERC1-215ENST00000561436 TM2D1Q9BX74 207 aa2.82□□□□□ -1.96
HERC1-215ENST00000561436 GBA3Q9H227 469 aa2.82□□□□□ -1.96
HERC1-215ENST00000561436 PPDPFQ9H3Y8 114 aa2.82□□□□□ -1.96
HERC1-215ENST00000561436 RMND5AQ9H871 391 aa2.82□□□□□ -1.96
HERC1-215ENST00000561436 RPS10P5Q9NQ39 176 aa2.82□□□□□ -1.96
HERC1-215ENST00000561436 MEPEQ9NQ76 525 aaPredicted RBP2.82□□□□□ -1.96
HERC1-215ENST00000561436 MIEF1Q9NQG6 463 aa2.82□□□□□ -1.96
HERC1-215ENST00000561436 QPCTLQ9NXS2 382 aa2.82□□□□□ -1.96
HERC1-215ENST00000561436 CTSFQ9UBX1 484 aa2.82□□□□□ -1.96
HERC1-215ENST00000561436 TMCC3Q9ULS5 477 aa2.82□□□□□ -1.96
HERC1-215ENST00000561436 NPIPA1Q9UND3 350 aa2.82□□□□□ -1.96
HERC1-215ENST00000561436 SBDSQ9Y3A5 250 aaKnown RBP eCLIP2.82□□□□□ -1.96
HERC1-215ENST00000561436 OARD1Q9Y530 152 aa2.82□□□□□ -1.96
HERC1-215ENST00000561436 DNHD1Q96M86 4753 aa2.82□□□□□ -1.96
HERC1-215ENST00000561436 COL12A1Q99715 3063 aa2.82□□□□□ -1.96
HERC1-215ENST00000561436 COL27A1Q8IZC6 1860 aaPredicted RBP2.82□□□□□ -1.96
HERC1-215ENST00000561436 DENND4CQ5VZ89 1909 aa2.81□□□□□ -1.96
HERC1-215ENST00000561436 ABCA2Q9BZC7 2435 aa2.81□□□□□ -1.96
HERC1-215ENST00000561436 DHRS7CA6NNS2 312 aa2.81□□□□□ -1.96
HERC1-215ENST00000561436 FAM220BPB1ANY3 271 aa2.81□□□□□ -1.96
HERC1-215ENST00000561436 NPIPA7E9PJI5 369 aa2.81□□□□□ -1.96
HERC1-215ENST00000561436 PSTPIP1O43586 416 aa2.81□□□□□ -1.96
HERC1-215ENST00000561436 UGT2B17O75795 530 aa2.81□□□□□ -1.96
HERC1-215ENST00000561436 LRATO95237 230 aa2.81□□□□□ -1.96
HERC1-215ENST00000561436 NSA2O95478 260 aaKnown RBP2.81□□□□□ -1.96
HERC1-215ENST00000561436 H2BFMP0C1H6 154 aa2.81□□□□□ -1.96
HERC1-215ENST00000561436 PIRTP0C851 137 aa2.81□□□□□ -1.96
HERC1-215ENST00000561436 NPIPA8P0DM63 369 aa2.81□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms