RNA–Protein interactions for RNA: ENST00000561375.5

DCAF11-238, Transcript of DDB1 and CUL4 associated factor 11, human

TSL 3

Gene DCAF11, Length 748 nt, Biotype protein coding, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
DCAF11-238	ENST00000561375	DDX28	Q9NUL7	540 aa	Known RBP	15.2	■□□□□ 0.02
DCAF11-238	ENST00000561375	TBCCD1	Q9NVR7	557 aa		15.2	■□□□□ 0.02
DCAF11-238	ENST00000561375	ASH2L	Q9UBL3	628 aa		15.2	■□□□□ 0.02
DCAF11-238	ENST00000561375	IL20RA	Q9UHF4	553 aa		15.2	■□□□□ 0.02
DCAF11-238	ENST00000561375	TRAPPC2L	H3BP13	241 aa		15.19	■□□□□ 0.02
DCAF11-238	ENST00000561375	NME4	O00746	187 aa		15.19	■□□□□ 0.02
DCAF11-238	ENST00000561375	DBH	P09172	617 aa		15.19	■□□□□ 0.02
DCAF11-238	ENST00000561375	TNFRSF1A	P19438	455 aa		15.19	■□□□□ 0.02
DCAF11-238	ENST00000561375	KITLG	P21583	273 aa		15.19	■□□□□ 0.02
DCAF11-238	ENST00000561375	SLC7A2	P52569	658 aa		15.19	■□□□□ 0.02
DCAF11-238	ENST00000561375	HLX	Q14774	488 aa	Predicted RBP	15.19	■□□□□ 0.02
DCAF11-238	ENST00000561375	TMPRSS11F	Q6ZWK6	438 aa		15.19	■□□□□ 0.02
DCAF11-238	ENST00000561375	RRM2B	Q7LG56	351 aa		15.19	■□□□□ 0.02
DCAF11-238	ENST00000561375	FAM122B	Q7Z309	247 aa		15.19	■□□□□ 0.02
DCAF11-238	ENST00000561375	ARPIN	Q7Z6K5	226 aa		15.19	■□□□□ 0.02
DCAF11-238	ENST00000561375	ZSCAN2	Q7Z7L9	614 aa	Predicted RBP	15.19	■□□□□ 0.02
DCAF11-238	ENST00000561375	RNF113B	Q8IZP6	322 aa	Known RBP	15.19	■□□□□ 0.02
DCAF11-238	ENST00000561375	BCL6B	Q8N143	479 aa	Predicted RBP	15.19	■□□□□ 0.02
DCAF11-238	ENST00000561375	ZNF283	Q8N7M2	679 aa		15.19	■□□□□ 0.02
DCAF11-238	ENST00000561375	OR10AD1	Q8NGE0	317 aa		15.19	■□□□□ 0.02
DCAF11-238	ENST00000561375	SAMD8	Q96LT4	415 aa		15.19	■□□□□ 0.02
DCAF11-238	ENST00000561375	SIGLEC11	Q96RL6	698 aa		15.19	■□□□□ 0.02
DCAF11-238	ENST00000561375	SYT4	Q9H2B2	425 aa		15.19	■□□□□ 0.02
DCAF11-238	ENST00000561375	PTTG3P	Q9NZH4	202 aa		15.19	■□□□□ 0.02
DCAF11-238	ENST00000561375	ZNF69	Q9UC07	566 aa		15.19	■□□□□ 0.02
DCAF11-238	ENST00000561375	PPP1R3C	Q9UQK1	317 aa		15.19	■□□□□ 0.02
DCAF11-238	ENST00000561375	COA3	Q9Y2R0	106 aa	Predicted RBP	15.19	■□□□□ 0.02
DCAF11-238	ENST00000561375	PCDHGB1	Q9Y5G3	927 aa		15.19	■□□□□ 0.02
DCAF11-238	ENST00000561375	AUP1	Q9Y679	476 aa		15.19	■□□□□ 0.02
DCAF11-238	ENST00000561375	PPIAL4E	A0A075B759	164 aa		15.18	■□□□□ 0.02
DCAF11-238	ENST00000561375	PPIAL4C	A0A0B4J2A2	164 aa		15.18	■□□□□ 0.02
DCAF11-238	ENST00000561375	IGHV3-64D	A0A0J9YX35	117 aa		15.18	■□□□□ 0.02
DCAF11-238	ENST00000561375	PPIAL4D	F5H284	164 aa		15.18	■□□□□ 0.02
DCAF11-238	ENST00000561375	SOCS2	O14508	198 aa		15.18	■□□□□ 0.02
DCAF11-238	ENST00000561375	WIPF1	O43516	503 aa		15.18	■□□□□ 0.02
DCAF11-238	ENST00000561375	SLC16A7	O60669	478 aa		15.18	■□□□□ 0.02
DCAF11-238	ENST00000561375	ZNF205	O95201	554 aa		15.18	■□□□□ 0.02
DCAF11-238	ENST00000561375	GPANK1	O95872	356 aa		15.18	■□□□□ 0.02
DCAF11-238	ENST00000561375	PPIAL4F	P0DN26	164 aa		15.18	■□□□□ 0.02
DCAF11-238	ENST00000561375	NCK1	P16333	377 aa		15.18	■□□□□ 0.02
DCAF11-238	ENST00000561375	ZNF154	Q13106	437 aa		15.18	■□□□□ 0.02
DCAF11-238	ENST00000561375	AQP6	Q13520	282 aa		15.18	■□□□□ 0.02
DCAF11-238	ENST00000561375	KLF17	Q5JT82	389 aa	Predicted RBP	15.18	■□□□□ 0.02
DCAF11-238	ENST00000561375	RBMS3	Q6XE24	437 aa	Known RBP	15.18	■□□□□ 0.02
DCAF11-238	ENST00000561375	CBLL1	Q75N03	491 aa		15.18	■□□□□ 0.02
DCAF11-238	ENST00000561375	FAM156A	Q8NDB6	213 aa		15.18	■□□□□ 0.02
DCAF11-238	ENST00000561375	SGMS2	Q8NHU3	365 aa		15.18	■□□□□ 0.02
DCAF11-238	ENST00000561375	POP5	Q969H6	163 aa	Known RBP	15.18	■□□□□ 0.02
DCAF11-238	ENST00000561375	HAVCR1	Q96D42	359 aa		15.18	■□□□□ 0.02
DCAF11-238	ENST00000561375	NDEL1	Q9GZM8	345 aa		15.18	■□□□□ 0.02
DCAF11-238	ENST00000561375	NMNAT1	Q9HAN9	279 aa	Predicted RBP	15.18	■□□□□ 0.02
DCAF11-238	ENST00000561375	NTN4	Q9HB63	628 aa		15.18	■□□□□ 0.02
DCAF11-238	ENST00000561375	OR6C6	A6NF89	314 aa		15.17	■□□□□ 0.02
DCAF11-238	ENST00000561375	DNAJC9-AS1	A6NH13	148 aa		15.17	■□□□□ 0.02
DCAF11-238	ENST00000561375	RER1	O15258	196 aa		15.17	■□□□□ 0.02
DCAF11-238	ENST00000561375	ZNF12	P17014	697 aa		15.17	■□□□□ 0.02
DCAF11-238	ENST00000561375	SLC6A9	P48067	706 aa		15.17	■□□□□ 0.02
DCAF11-238	ENST00000561375	GSK3B	P49841	420 aa		15.17	■□□□□ 0.02
DCAF11-238	ENST00000561375	MMP16	P51512	607 aa		15.17	■□□□□ 0.02
DCAF11-238	ENST00000561375	GUCY1A3	Q02108	690 aa		15.17	■□□□□ 0.02
DCAF11-238	ENST00000561375	TMEM155	Q4W5P6	130 aa		15.17	■□□□□ 0.02
DCAF11-238	ENST00000561375	CCDC92	Q53HC0	331 aa	Predicted RBP	15.17	■□□□□ 0.02
DCAF11-238	ENST00000561375	FGD3	Q5JSP0	725 aa		15.17	■□□□□ 0.02
DCAF11-238	ENST00000561375	TSEN54	Q7Z6J9	526 aa	Known RBP	15.17	■□□□□ 0.02
DCAF11-238	ENST00000561375	CYP4Z1	Q86W10	505 aa		15.17	■□□□□ 0.02
DCAF11-238	ENST00000561375	LRRC28	Q86X40	367 aa	Predicted RBP	15.17	■□□□□ 0.02
DCAF11-238	ENST00000561375	GLB1L2	Q8IW92	636 aa		15.17	■□□□□ 0.02
DCAF11-238	ENST00000561375	ATG16L2	Q8NAA4	619 aa		15.17	■□□□□ 0.02
DCAF11-238	ENST00000561375	OR1F12	Q8NHA8	337 aa		15.17	■□□□□ 0.02
DCAF11-238	ENST00000561375	ZNF420	Q8TAQ5	688 aa	Predicted RBP	15.17	■□□□□ 0.02
DCAF11-238	ENST00000561375	SLC7A13	Q8TCU3	470 aa		15.17	■□□□□ 0.02
DCAF11-238	ENST00000561375	FAM162A	Q96A26	154 aa		15.17	■□□□□ 0.02
DCAF11-238	ENST00000561375	WAC	Q9BTA9	647 aa		15.17	■□□□□ 0.02
DCAF11-238	ENST00000561375	MRI1	Q9BV20	369 aa		15.17	■□□□□ 0.02
DCAF11-238	ENST00000561375	IL19	Q9UHD0	177 aa		15.17	■□□□□ 0.02
DCAF11-238	ENST00000561375	NUP50	Q9UKX7	468 aa		15.17	■□□□□ 0.02
DCAF11-238	ENST00000561375	TMEM5	Q9Y2B1	443 aa		15.17	■□□□□ 0.02
DCAF11-238	ENST00000561375	POLR1D	Q9Y2S0	133 aa		15.17	■□□□□ 0.02
DCAF11-238	ENST00000561375	AP3M1	Q9Y2T2	418 aa		15.17	■□□□□ 0.02
DCAF11-238	ENST00000561375	INSIG2	Q9Y5U4	225 aa		15.17	■□□□□ 0.02
DCAF11-238	ENST00000561375	IGHV3OR16-10	A0A075B7F0	116 aa		15.16	■□□□□ 0.02
DCAF11-238	ENST00000561375	CEACAM18	A8MTB9	384 aa		15.16	■□□□□ 0.02
DCAF11-238	ENST00000561375		F5H0A9	414 aa	Predicted RBP	15.16	■□□□□ 0.02
DCAF11-238	ENST00000561375	SURF4	O15260	269 aa		15.16	■□□□□ 0.02
DCAF11-238	ENST00000561375	AHCYL1	O43865	530 aa		15.16	■□□□□ 0.02
DCAF11-238	ENST00000561375	KHDRBS3	O75525	346 aa	Known RBP	15.16	■□□□□ 0.02
DCAF11-238	ENST00000561375	NDUFB2	O95178	105 aa		15.16	■□□□□ 0.02
DCAF11-238	ENST00000561375	CYB5R3	P00387	301 aa	Predicted RBP	15.16	■□□□□ 0.02
DCAF11-238	ENST00000561375	COX4I1	P13073	169 aa		15.16	■□□□□ 0.02
DCAF11-238	ENST00000561375	SDHA	P31040	664 aa		15.16	■□□□□ 0.02
DCAF11-238	ENST00000561375	MDH2	P40926	338 aa	Known RBP	15.16	■□□□□ 0.02
DCAF11-238	ENST00000561375	CENPA	P49450	140 aa		15.16	■□□□□ 0.02
DCAF11-238	ENST00000561375	DBP	Q10586	325 aa	Predicted RBP	15.16	■□□□□ 0.02
DCAF11-238	ENST00000561375	MEP1B	Q16820	701 aa		15.16	■□□□□ 0.02
DCAF11-238	ENST00000561375	ESCO2	Q56NI9	601 aa		15.16	■□□□□ 0.02
DCAF11-238	ENST00000561375	HSP90B2P	Q58FF3	399 aa		15.16	■□□□□ 0.02
DCAF11-238	ENST00000561375	OR2T2	Q6IF00	324 aa		15.16	■□□□□ 0.02
DCAF11-238	ENST00000561375	PTCHD4	Q6ZW05	846 aa		15.16	■□□□□ 0.02
DCAF11-238	ENST00000561375	PTP4A1	Q93096	173 aa		15.16	■□□□□ 0.02
DCAF11-238	ENST00000561375	RSRC1	Q96IZ7	334 aa	Known RBP	15.16	■□□□□ 0.02

Retrieved 100 of 20,778 RNA–protein pairs in 90.8 ms