RNA–Protein interactions for RNA: ENST00000561359.1

HERC1-213, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 3

Gene HERC1, Length 551 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-213ENST00000561359 SLC35G5Q96KT7 338 aa4.3□□□□□ -1.72
HERC1-213ENST00000561359 C16orf45Q96MC5 204 aaPredicted RBP4.3□□□□□ -1.72
HERC1-213ENST00000561359 CCT7Q99832 543 aa4.3□□□□□ -1.72
HERC1-213ENST00000561359 MRPL57Q9BQC6 102 aaKnown RBP4.3□□□□□ -1.72
HERC1-213ENST00000561359 MCRIP2Q9BUT9 160 aaKnown RBP4.3□□□□□ -1.72
HERC1-213ENST00000561359 DPY30Q9C005 99 aa4.3□□□□□ -1.72
HERC1-213ENST00000561359 MYLK2Q9H1R3 596 aa4.3□□□□□ -1.72
HERC1-213ENST00000561359 MRPL46Q9H2W6 279 aaKnown RBP4.3□□□□□ -1.72
HERC1-213ENST00000561359 ZMAT4Q9H898 229 aa4.3□□□□□ -1.72
HERC1-213ENST00000561359 ZNF702PQ9H963 129 aa4.3□□□□□ -1.72
HERC1-213ENST00000561359 POLE3Q9NRF9 147 aa4.3□□□□□ -1.72
HERC1-213ENST00000561359 MAN2C1Q9NTJ4 1040 aa4.3□□□□□ -1.72
HERC1-213ENST00000561359 C1orf109Q9NX04 203 aa4.3□□□□□ -1.72
HERC1-213ENST00000561359 DUX4Q9UBX2 424 aa4.3□□□□□ -1.72
HERC1-213ENST00000561359 ATP6V1HQ9UI12 483 aa4.3□□□□□ -1.72
HERC1-213ENST00000561359 STK38LQ9Y2H1 464 aa4.3□□□□□ -1.72
HERC1-213ENST00000561359 TANC2Q9HCD6 1990 aa4.3□□□□□ -1.72
HERC1-213ENST00000561359 PLECQ15149 4684 aaKnown RBP4.29□□□□□ -1.72
HERC1-213ENST00000561359 A0A096LPI6 279 aa4.29□□□□□ -1.72
HERC1-213ENST00000561359 LOC102725191A0A1B0GVB3 256 aa4.29□□□□□ -1.72
HERC1-213ENST00000561359 TCRBV4S1A1TA0A5B7 111 aa4.29□□□□□ -1.72
HERC1-213ENST00000561359 ELOVL7A1L3X0 281 aa4.29□□□□□ -1.72
HERC1-213ENST00000561359 H3BSA7 217 aa4.29□□□□□ -1.72
HERC1-213ENST00000561359 OR10H3O60404 316 aa4.29□□□□□ -1.72
HERC1-213ENST00000561359 NPIPB7O75200 414 aa4.29□□□□□ -1.72
HERC1-213ENST00000561359 SERPINI2O75830 405 aa4.29□□□□□ -1.72
HERC1-213ENST00000561359 AGR2O95994 175 aa4.29□□□□□ -1.72
HERC1-213ENST00000561359 LHBP01229 141 aa4.29□□□□□ -1.72
HERC1-213ENST00000561359 GSTA1P08263 222 aa4.29□□□□□ -1.72
HERC1-213ENST00000561359 INHBAP08476 426 aa4.29□□□□□ -1.72
HERC1-213ENST00000561359 GSTA2P09210 222 aa4.29□□□□□ -1.72
HERC1-213ENST00000561359 QDPRP09417 244 aa4.29□□□□□ -1.72
HERC1-213ENST00000561359 GKN3PP0CG01 181 aa4.29□□□□□ -1.72
HERC1-213ENST00000561359 LAMP1P11279 417 aa4.29□□□□□ -1.72
HERC1-213ENST00000561359 TAC1P20366 129 aa4.29□□□□□ -1.72
HERC1-213ENST00000561359 AHCYP23526 432 aa4.29□□□□□ -1.72
HERC1-213ENST00000561359 GRPRP30550 384 aa4.29□□□□□ -1.72
HERC1-213ENST00000561359 SAA4P35542 130 aa4.29□□□□□ -1.72
HERC1-213ENST00000561359 HPCAL1P37235 193 aa4.29□□□□□ -1.72
HERC1-213ENST00000561359 GDI2P50395 445 aaKnown RBP4.29□□□□□ -1.72
HERC1-213ENST00000561359 ARHGDIAP52565 204 aa4.29□□□□□ -1.72
HERC1-213ENST00000561359 FOXA1P55317 472 aa4.29□□□□□ -1.72
HERC1-213ENST00000561359 PSG7Q13046 419 aa4.29□□□□□ -1.72
HERC1-213ENST00000561359 NAB1Q13506 487 aa4.29□□□□□ -1.72
HERC1-213ENST00000561359 GNA13Q14344 377 aa4.29□□□□□ -1.72
HERC1-213ENST00000561359 KIAA0040Q15053 153 aa4.29□□□□□ -1.72
HERC1-213ENST00000561359 TAF11Q15544 211 aa4.29□□□□□ -1.72
HERC1-213ENST00000561359 CDONQ4KMG0 1287 aa4.29□□□□□ -1.72
HERC1-213ENST00000561359 GPAT3Q53EU6 434 aa4.29□□□□□ -1.72
HERC1-213ENST00000561359 PABPC1L2AQ5JQF8 200 aa4.29□□□□□ -1.72
HERC1-213ENST00000561359 TNFAIP8L2Q6P589 184 aaPredicted RBP4.29□□□□□ -1.72
HERC1-213ENST00000561359 Q6ZR03 302 aa4.29□□□□□ -1.72
HERC1-213ENST00000561359 C6orf120Q7Z4R8 191 aa4.29□□□□□ -1.72
HERC1-213ENST00000561359 IGFN1Q86VF2 1251 aa4.29□□□□□ -1.72
HERC1-213ENST00000561359 MOGAT3Q86VF5 341 aa4.29□□□□□ -1.72
HERC1-213ENST00000561359 SBSPONQ8IVN8 264 aa4.29□□□□□ -1.72
HERC1-213ENST00000561359 KLHL7Q8IXQ5 586 aa4.29□□□□□ -1.72
HERC1-213ENST00000561359 ZNF440Q8IYI8 595 aa4.29□□□□□ -1.72
HERC1-213ENST00000561359 LRRC18Q8N456 261 aa4.29□□□□□ -1.72
HERC1-213ENST00000561359 C19orf18Q8NEA5 215 aa4.29□□□□□ -1.72
HERC1-213ENST00000561359 OR5AU1Q8NGC0 362 aa4.29□□□□□ -1.72
HERC1-213ENST00000561359 OR51G2Q8NGK0 314 aa4.29□□□□□ -1.72
HERC1-213ENST00000561359 PSMA8Q8TAA3 256 aa4.29□□□□□ -1.72
HERC1-213ENST00000561359 WIPF2Q8TF74 440 aaPredicted RBP4.29□□□□□ -1.72
HERC1-213ENST00000561359 ROPN1LQ96C74 230 aa4.29□□□□□ -1.72
HERC1-213ENST00000561359 TUBGCP3Q96CW5 907 aa4.29□□□□□ -1.72
HERC1-213ENST00000561359 MTERF3Q96E29 417 aa4.29□□□□□ -1.72
HERC1-213ENST00000561359 METTL2AQ96IZ6 378 aaKnown RBP4.29□□□□□ -1.72
HERC1-213ENST00000561359 CLUHP3Q96NS8 147 aa4.29□□□□□ -1.72
HERC1-213ENST00000561359 TMEM237Q96Q45 408 aa4.29□□□□□ -1.72
HERC1-213ENST00000561359 PTDSS2Q9BVG9 487 aa4.29□□□□□ -1.72
HERC1-213ENST00000561359 OR51I1Q9H343 314 aa4.29□□□□□ -1.72
HERC1-213ENST00000561359 MID1IP1Q9NPA3 183 aa4.29□□□□□ -1.72
HERC1-213ENST00000561359 NANSQ9NR45 359 aa4.29□□□□□ -1.72
HERC1-213ENST00000561359 SIRT7Q9NRC8 400 aa4.29□□□□□ -1.72
HERC1-213ENST00000561359 TMEM38BQ9NVV0 291 aa4.29□□□□□ -1.72
HERC1-213ENST00000561359 ONECUT1Q9UBC0 465 aa4.29□□□□□ -1.72
HERC1-213ENST00000561359 MAGEL2Q9UJ55 1249 aa4.29□□□□□ -1.72
HERC1-213ENST00000561359 BLOC1S6Q9UL45 172 aa4.29□□□□□ -1.72
HERC1-213ENST00000561359 NDRG4Q9ULP0 352 aaKnown RBP4.29□□□□□ -1.72
HERC1-213ENST00000561359 TSSC4Q9Y5U2 329 aaPredicted RBP4.29□□□□□ -1.72
HERC1-213ENST00000561359 HECTD4Q9Y4D8 3996 aa4.28□□□□□ -1.72
HERC1-213ENST00000561359 LOC100509620A0A075B734 347 aa4.28□□□□□ -1.72
HERC1-213ENST00000561359 RNF103-CHMP3A0A140T963 221 aa4.28□□□□□ -1.72
HERC1-213ENST00000561359 MS4A18H0YCH9 400 aa4.28□□□□□ -1.72
HERC1-213ENST00000561359 TP73O15350 636 aa4.28□□□□□ -1.72
HERC1-213ENST00000561359 ADAM20O43506 726 aa4.28□□□□□ -1.72
HERC1-213ENST00000561359 SLC25A17O43808 307 aa4.28□□□□□ -1.72
HERC1-213ENST00000561359 OR2T1O43869 369 aa4.28□□□□□ -1.72
HERC1-213ENST00000561359 CHST1O43916 411 aa4.28□□□□□ -1.72
HERC1-213ENST00000561359 FSTL3O95633 263 aa4.28□□□□□ -1.72
HERC1-213ENST00000561359 HPRP00739 348 aa4.28□□□□□ -1.72
HERC1-213ENST00000561359 IRF2P14316 349 aa4.28□□□□□ -1.72
HERC1-213ENST00000561359 IL7RP16871 459 aa4.28□□□□□ -1.72
HERC1-213ENST00000561359 GSTM3P21266 225 aa4.28□□□□□ -1.72
HERC1-213ENST00000561359 ARRB2P32121 409 aa4.28□□□□□ -1.72
HERC1-213ENST00000561359 PSMB10P40306 273 aa4.28□□□□□ -1.72
HERC1-213ENST00000561359 VDAC2P45880 294 aaPredicted RBP4.28□□□□□ -1.72
HERC1-213ENST00000561359 SRP9P49458 86 aaKnown RBP4.28□□□□□ -1.72
HERC1-213ENST00000561359 BMXP51813 675 aa4.28□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms