RNA–Protein interactions for RNA: ENST00000561326.5

USP3-219, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 4

Gene USP3, Length 543 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-219ENST00000561326 ABHD4Q8TB40 342 aa9.06□□□□□ -0.96
USP3-219ENST00000561326 THRSPQ92748 146 aa9.06□□□□□ -0.96
USP3-219ENST00000561326 GHSRQ92847 366 aa9.06□□□□□ -0.96
USP3-219ENST00000561326 TMEM203Q969S6 136 aa9.06□□□□□ -0.96
USP3-219ENST00000561326 WBP1Q96G27 269 aa9.06□□□□□ -0.96
USP3-219ENST00000561326 MAP6Q96JE9 813 aa9.06□□□□□ -0.96
USP3-219ENST00000561326 AMELYQ99218 206 aa9.06□□□□□ -0.96
USP3-219ENST00000561326 SH3GL3Q99963 347 aa9.06□□□□□ -0.96
USP3-219ENST00000561326 TMED9Q9BVK6 235 aa9.06□□□□□ -0.96
USP3-219ENST00000561326 RNF121Q9H920 327 aa9.06□□□□□ -0.96
USP3-219ENST00000561326 PLSCR4Q9NRQ2 329 aa9.06□□□□□ -0.96
USP3-219ENST00000561326 GALNT8Q9NY28 637 aa9.06□□□□□ -0.96
USP3-219ENST00000561326 MALT1Q9UDY8 824 aa9.06□□□□□ -0.96
USP3-219ENST00000561326 ST6GALNAC2Q9UJ37 374 aa9.06□□□□□ -0.96
USP3-219ENST00000561326 ZNF835Q9Y2P0 537 aa9.06□□□□□ -0.96
USP3-219ENST00000561326 SF3B6Q9Y3B4 125 aaKnown RBP9.06□□□□□ -0.96
USP3-219ENST00000561326 LRP12Q9Y561 859 aa9.06□□□□□ -0.96
USP3-219ENST00000561326 SIRT4Q9Y6E7 314 aaPredicted RBP9.06□□□□□ -0.96
USP3-219ENST00000561326 PCNX1Q96RV3 2341 aa9.05□□□□□ -0.96
USP3-219ENST00000561326 ACACBO00763 2458 aa9.05□□□□□ -0.96
USP3-219ENST00000561326 ACOD1A6NK06 481 aa9.05□□□□□ -0.96
USP3-219ENST00000561326 LOC110117498-PIK3R3F6TDL0 507 aa9.05□□□□□ -0.96
USP3-219ENST00000561326 RER1O15258 196 aa9.05□□□□□ -0.96
USP3-219ENST00000561326 SGCEO43556 437 aa9.05□□□□□ -0.96
USP3-219ENST00000561326 SLC19A2O60779 497 aa9.05□□□□□ -0.96
USP3-219ENST00000561326 GATBO75879 557 aaKnown RBP9.05□□□□□ -0.96
USP3-219ENST00000561326 RGS9O75916 674 aaPredicted RBP9.05□□□□□ -0.96
USP3-219ENST00000561326 ABHD16AO95870 558 aa9.05□□□□□ -0.96
USP3-219ENST00000561326 PSKH1P11801 424 aa9.05□□□□□ -0.96
USP3-219ENST00000561326 CTSSP25774 331 aa9.05□□□□□ -0.96
USP3-219ENST00000561326 UGT2B10P36537 528 aa9.05□□□□□ -0.96
USP3-219ENST00000561326 ARR3P36575 388 aa9.05□□□□□ -0.96
USP3-219ENST00000561326 OPRL1P41146 370 aa9.05□□□□□ -0.96
USP3-219ENST00000561326 KIR2DL2P43627 348 aaPredicted RBP9.05□□□□□ -0.96
USP3-219ENST00000561326 MMP16P51512 607 aa9.05□□□□□ -0.96
USP3-219ENST00000561326 VBP1P61758 197 aa9.05□□□□□ -0.96
USP3-219ENST00000561326 RPS25P62851 125 aaKnown RBP9.05□□□□□ -0.96
USP3-219ENST00000561326 HIST1H3AP68431 136 aa9.05□□□□□ -0.96
USP3-219ENST00000561326 GUSBP1Q15486 140 aa9.05□□□□□ -0.96
USP3-219ENST00000561326 ELFN2Q5R3F8 820 aa9.05□□□□□ -0.96
USP3-219ENST00000561326 HIST2H3PS2Q5TEC6 136 aa9.05□□□□□ -0.96
USP3-219ENST00000561326 RTL6Q6ICC9 239 aa9.05□□□□□ -0.96
USP3-219ENST00000561326 TMEM211Q6ICI0 200 aa9.05□□□□□ -0.96
USP3-219ENST00000561326 OR7E24Q6IFN5 339 aa9.05□□□□□ -0.96
USP3-219ENST00000561326 TMEM53Q6P2H8 277 aa9.05□□□□□ -0.96
USP3-219ENST00000561326 CD200R1LQ6Q8B3 271 aa9.05□□□□□ -0.96
USP3-219ENST00000561326 TFAP2EQ6VUC0 442 aa9.05□□□□□ -0.96
USP3-219ENST00000561326 ZNF704Q6ZNC4 412 aaPredicted RBP9.05□□□□□ -0.96
USP3-219ENST00000561326 CFAP77Q6ZQR2 320 aa9.05□□□□□ -0.96
USP3-219ENST00000561326 Q6ZT83 130 aa9.05□□□□□ -0.96
USP3-219ENST00000561326 BEND4Q6ZU67 534 aa9.05□□□□□ -0.96
USP3-219ENST00000561326 HIST2H3AQ71DI3 136 aa9.05□□□□□ -0.96
USP3-219ENST00000561326 DOLPP1Q86YN1 238 aa9.05□□□□□ -0.96
USP3-219ENST00000561326 CCDC36Q8IYA8 594 aa9.05□□□□□ -0.96
USP3-219ENST00000561326 ZNF676Q8N7Q3 588 aa9.05□□□□□ -0.96
USP3-219ENST00000561326 OR2G2Q8NGZ5 317 aa9.05□□□□□ -0.96
USP3-219ENST00000561326 PHYHIPQ92561 330 aa9.05□□□□□ -0.96
USP3-219ENST00000561326 SPTSSAQ969W0 71 aa9.05□□□□□ -0.96
USP3-219ENST00000561326 KCTD7Q96MP8 289 aa9.05□□□□□ -0.96
USP3-219ENST00000561326 ATF6BQ99941 703 aa9.05□□□□□ -0.96
USP3-219ENST00000561326 HDHD2Q9H0R4 259 aa9.05□□□□□ -0.96
USP3-219ENST00000561326 TXNL4BQ9NX01 149 aaKnown RBP9.05□□□□□ -0.96
USP3-219ENST00000561326 PLEK2Q9NYT0 353 aa9.05□□□□□ -0.96
USP3-219ENST00000561326 PTTG2Q9NZH5 202 aa9.05□□□□□ -0.96
USP3-219ENST00000561326 FRRS1LQ9P0K9 344 aa9.05□□□□□ -0.96
USP3-219ENST00000561326 PRSS50Q9UI38 385 aa9.05□□□□□ -0.96
USP3-219ENST00000561326 GTF2A1LQ9UNN4 478 aa9.05□□□□□ -0.96
USP3-219ENST00000561326 PROCRQ9UNN8 238 aa9.05□□□□□ -0.96
USP3-219ENST00000561326 ZNF281Q9Y2X9 895 aa9.05□□□□□ -0.96
USP3-219ENST00000561326 GRIP1Q9Y3R0 1128 aa9.05□□□□□ -0.96
USP3-219ENST00000561326 R4GMQ9 66 aa9.05□□□□□ -0.96
USP3-219ENST00000561326 SHANK1Q9Y566 2161 aa9.05□□□□□ -0.96
USP3-219ENST00000561326 CIB4A0PJX0 185 aa9.04□□□□□ -0.96
USP3-219ENST00000561326 PRR32B1ATL7 298 aa9.04□□□□□ -0.96
USP3-219ENST00000561326 GPX5O75715 221 aa9.04□□□□□ -0.96
USP3-219ENST00000561326 ATE1O95260 518 aa9.04□□□□□ -0.96
USP3-219ENST00000561326 HOXB1P14653 301 aaPredicted RBP9.04□□□□□ -0.96
USP3-219ENST00000561326 CEACAM8P31997 349 aaPredicted RBP9.04□□□□□ -0.96
USP3-219ENST00000561326 SERPINB10P48595 397 aa9.04□□□□□ -0.96
USP3-219ENST00000561326 NCS1P62166 190 aa9.04□□□□□ -0.96
USP3-219ENST00000561326 FABP5Q01469 135 aa9.04□□□□□ -0.96
USP3-219ENST00000561326 PLP2Q04941 152 aa9.04□□□□□ -0.96
USP3-219ENST00000561326 NFATC3Q12968 1075 aa9.04□□□□□ -0.96
USP3-219ENST00000561326 DOC2BQ14184 412 aa9.04□□□□□ -0.96
USP3-219ENST00000561326 RAB35Q15286 201 aa9.04□□□□□ -0.96
USP3-219ENST00000561326 DGUOKQ16854 277 aa9.04□□□□□ -0.96
USP3-219ENST00000561326 ACSM3Q53FZ2 586 aa9.04□□□□□ -0.96
USP3-219ENST00000561326 YIF1BQ5BJH7 314 aa9.04□□□□□ -0.96
USP3-219ENST00000561326 BCL2L15Q5TBC7 163 aa9.04□□□□□ -0.96
USP3-219ENST00000561326 C9orf135Q5VTT2 229 aa9.04□□□□□ -0.96
USP3-219ENST00000561326 CEACAM19Q7Z692 300 aa9.04□□□□□ -0.96
USP3-219ENST00000561326 SKA3Q8IX90 412 aa9.04□□□□□ -0.96
USP3-219ENST00000561326 NANOS1Q8WY41 292 aaKnown RBP9.04□□□□□ -0.96
USP3-219ENST00000561326 HTRA1Q92743 480 aa9.04□□□□□ -0.96
USP3-219ENST00000561326 RPL3LQ92901 407 aaKnown RBP9.04□□□□□ -0.96
USP3-219ENST00000561326 FBXO17Q96EF6 278 aa9.04□□□□□ -0.96
USP3-219ENST00000561326 KCNJ15Q99712 375 aa9.04□□□□□ -0.96
USP3-219ENST00000561326 CENPOQ9BU64 300 aa9.04□□□□□ -0.96
USP3-219ENST00000561326 HDHD5Q9BXW7 423 aa9.04□□□□□ -0.96
USP3-219ENST00000561326 DCSTAMPQ9H295 470 aa9.04□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms