RNA–Protein interactions for RNA: ENST00000561242.1

TPM1-229, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 673 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-229ENST00000561242 TBX1O43435 398 aa9.29□□□□□ -0.92
TPM1-229ENST00000561242 TIMM8AO60220 97 aaPredicted RBP9.29□□□□□ -0.92
TPM1-229ENST00000561242 SNAP29O95721 258 aa9.29□□□□□ -0.92
TPM1-229ENST00000561242 PLAUP00749 431 aa9.29□□□□□ -0.92
TPM1-229ENST00000561242 KRT8P05787 483 aa9.29□□□□□ -0.92
TPM1-229ENST00000561242 ANXA2P07355 339 aaKnown RBP9.29□□□□□ -0.92
TPM1-229ENST00000561242 CELA3BP08861 270 aa9.29□□□□□ -0.92
TPM1-229ENST00000561242 CCL2P13500 99 aa9.29□□□□□ -0.92
TPM1-229ENST00000561242 ZNF14P17017 642 aaPredicted RBP9.29□□□□□ -0.92
TPM1-229ENST00000561242 CFL1P23528 166 aaKnown RBP9.29□□□□□ -0.92
TPM1-229ENST00000561242 NAA10P41227 235 aaPredicted RBP9.29□□□□□ -0.92
TPM1-229ENST00000561242 ATP5J2P56134 94 aa9.29□□□□□ -0.92
TPM1-229ENST00000561242 MZT1Q08AG7 82 aa9.29□□□□□ -0.92
TPM1-229ENST00000561242 IL18R1Q13478 541 aa9.29□□□□□ -0.92
TPM1-229ENST00000561242 ENDOGQ14249 297 aaKnown RBP9.29□□□□□ -0.92
TPM1-229ENST00000561242 KLHL22Q53GT1 634 aa9.29□□□□□ -0.92
TPM1-229ENST00000561242 LPCAT4Q643R3 524 aa9.29□□□□□ -0.92
TPM1-229ENST00000561242 CORO6Q6QEF8 472 aa9.29□□□□□ -0.92
TPM1-229ENST00000561242 UGT2A3Q6UWM9 527 aa9.29□□□□□ -0.92
TPM1-229ENST00000561242 PAMR1Q6UXH9 720 aa9.29□□□□□ -0.92
TPM1-229ENST00000561242 FOXL2NBQ6ZUU3 175 aa9.29□□□□□ -0.92
TPM1-229ENST00000561242 SPATC1Q76KD6 591 aa9.29□□□□□ -0.92
TPM1-229ENST00000561242 MRPL21Q7Z2W9 205 aaKnown RBP9.29□□□□□ -0.92
TPM1-229ENST00000561242 C8orf59Q8N0T1 100 aaPredicted RBP9.29□□□□□ -0.92
TPM1-229ENST00000561242 FTMTQ8N4E7 242 aa9.29□□□□□ -0.92
TPM1-229ENST00000561242 SPRYD4Q8WW59 207 aaPredicted RBP9.29□□□□□ -0.92
TPM1-229ENST00000561242 NABP1Q96AH0 204 aa9.29□□□□□ -0.92
TPM1-229ENST00000561242 NMD3Q96D46 503 aaKnown RBP9.29□□□□□ -0.92
TPM1-229ENST00000561242 SLAMF6Q96DU3 332 aa9.29□□□□□ -0.92
TPM1-229ENST00000561242 MS4A3Q96HJ5 214 aa9.29□□□□□ -0.92
TPM1-229ENST00000561242 PGAM5Q96HS1 289 aa9.29□□□□□ -0.92
TPM1-229ENST00000561242 HS3ST6Q96QI5 342 aa9.29□□□□□ -0.92
TPM1-229ENST00000561242 EGLN1Q9GZT9 426 aa9.29□□□□□ -0.92
TPM1-229ENST00000561242 WNT5BQ9H1J7 359 aa9.29□□□□□ -0.92
TPM1-229ENST00000561242 ZNF442Q9H7R0 627 aa9.29□□□□□ -0.92
TPM1-229ENST00000561242 FAM118AQ9NWS6 357 aa9.29□□□□□ -0.92
TPM1-229ENST00000561242 ATPIF1Q9UII2 106 aa9.29□□□□□ -0.92
TPM1-229ENST00000561242 PCNX3Q9H6A9 2034 aa9.29□□□□□ -0.92
TPM1-229ENST00000561242 DIDO1Q9BTC0 2240 aaKnown RBP9.28□□□□□ -0.92
TPM1-229ENST00000561242 DAPL1A0PJW8 107 aa9.28□□□□□ -0.92
TPM1-229ENST00000561242 GGT3PA6NGU5 568 aa9.28□□□□□ -0.92
TPM1-229ENST00000561242 J3QW42 95 aa9.28□□□□□ -0.92
TPM1-229ENST00000561242 PRKYO43930 277 aa9.28□□□□□ -0.92
TPM1-229ENST00000561242 FADS2O95864 444 aaKnown RBP9.28□□□□□ -0.92
TPM1-229ENST00000561242 GPANK1O95872 356 aa9.28□□□□□ -0.92
TPM1-229ENST00000561242 TFP02787 698 aa9.28□□□□□ -0.92
TPM1-229ENST00000561242 MRPL3P09001 348 aaKnown RBP9.28□□□□□ -0.92
TPM1-229ENST00000561242 CLUP10909 449 aa9.28□□□□□ -0.92
TPM1-229ENST00000561242 HTR1FP30939 366 aa9.28□□□□□ -0.92
TPM1-229ENST00000561242 THBS4P35443 961 aa9.28□□□□□ -0.92
TPM1-229ENST00000561242 RIDAP52758 137 aaKnown RBP9.28□□□□□ -0.92
TPM1-229ENST00000561242 PPP1CBP62140 327 aa9.28□□□□□ -0.92
TPM1-229ENST00000561242 ACTC1P68032 377 aa9.28□□□□□ -0.92
TPM1-229ENST00000561242 ACTA1P68133 377 aa9.28□□□□□ -0.92
TPM1-229ENST00000561242 CARTPTQ16568 116 aa9.28□□□□□ -0.92
TPM1-229ENST00000561242 TIGD6Q17RP2 521 aa9.28□□□□□ -0.92
TPM1-229ENST00000561242 ZNF829Q3KNS6 432 aaPredicted RBP9.28□□□□□ -0.92
TPM1-229ENST00000561242 TEX30Q5JUR7 227 aa9.28□□□□□ -0.92
TPM1-229ENST00000561242 C12orf73Q69YU5 71 aa9.28□□□□□ -0.92
TPM1-229ENST00000561242 C22orf34Q6ZV56 151 aa9.28□□□□□ -0.92
TPM1-229ENST00000561242 VASH1Q7L8A9 365 aaPredicted RBP9.28□□□□□ -0.92
TPM1-229ENST00000561242 DPY19L4Q7Z388 723 aa9.28□□□□□ -0.92
TPM1-229ENST00000561242 OR10H4Q8NGA5 316 aa9.28□□□□□ -0.92
TPM1-229ENST00000561242 OR51G2Q8NGK0 314 aa9.28□□□□□ -0.92
TPM1-229ENST00000561242 PTP4A1Q93096 173 aa9.28□□□□□ -0.92
TPM1-229ENST00000561242 HRASLS5Q96KN8 279 aa9.28□□□□□ -0.92
TPM1-229ENST00000561242 KCNJ15Q99712 375 aa9.28□□□□□ -0.92
TPM1-229ENST00000561242 TMEM204Q9BSN7 226 aa9.28□□□□□ -0.92
TPM1-229ENST00000561242 OR10A2Q9H208 303 aa9.28□□□□□ -0.92
TPM1-229ENST00000561242 PLEKHF2Q9H8W4 249 aa9.28□□□□□ -0.92
TPM1-229ENST00000561242 HINT3Q9NQE9 182 aaKnown RBP9.28□□□□□ -0.92
TPM1-229ENST00000561242 TBCCD1Q9NVR7 557 aa9.28□□□□□ -0.92
TPM1-229ENST00000561242 NKIRAS2Q9NYR9 191 aa9.28□□□□□ -0.92
TPM1-229ENST00000561242 TAAR3PQ9P1P4 343 aa9.28□□□□□ -0.92
TPM1-229ENST00000561242 CYB5R1Q9UHQ9 305 aa9.28□□□□□ -0.92
TPM1-229ENST00000561242 COMMD3-BMI1R4GMX3 469 aa9.28□□□□□ -0.92
TPM1-229ENST00000561242 FAM221AA4D161 298 aa9.27□□□□□ -0.93
TPM1-229ENST00000561242 SHISA9B4DS77 424 aa9.27□□□□□ -0.93
TPM1-229ENST00000561242 E7EQL1 145 aa9.27□□□□□ -0.93
TPM1-229ENST00000561242 M0R135 149 aa9.27□□□□□ -0.93
TPM1-229ENST00000561242 M0R233 179 aa9.27□□□□□ -0.93
TPM1-229ENST00000561242 DCTN6O00399 190 aa9.27□□□□□ -0.93
TPM1-229ENST00000561242 SYNGR3O43761 229 aa9.27□□□□□ -0.93
TPM1-229ENST00000561242 ZNF254O75437 659 aa9.27□□□□□ -0.93
TPM1-229ENST00000561242 MMP7P09237 267 aaPredicted RBP9.27□□□□□ -0.93
TPM1-229ENST00000561242 OR2T7P0C7T2 308 aa9.27□□□□□ -0.93
TPM1-229ENST00000561242 OCM2P0CE71 109 aa9.27□□□□□ -0.93
TPM1-229ENST00000561242 OCMP0CE72 109 aaPredicted RBP9.27□□□□□ -0.93
TPM1-229ENST00000561242 GAAP10253 952 aa9.27□□□□□ -0.93
TPM1-229ENST00000561242 PRF1P14222 555 aa9.27□□□□□ -0.93
TPM1-229ENST00000561242 MYL12AP19105 171 aa9.27□□□□□ -0.93
TPM1-229ENST00000561242 MTNR1AP48039 350 aa9.27□□□□□ -0.93
TPM1-229ENST00000561242 EVX1P49640 407 aa9.27□□□□□ -0.93
TPM1-229ENST00000561242 PRKXP51817 358 aa9.27□□□□□ -0.93
TPM1-229ENST00000561242 ART1P52961 327 aa9.27□□□□□ -0.93
TPM1-229ENST00000561242 CSNK2BP67870 215 aa9.27□□□□□ -0.93
TPM1-229ENST00000561242 DEFB113Q30KQ7 82 aa9.27□□□□□ -0.93
TPM1-229ENST00000561242 DRAM2Q6UX65 266 aa9.27□□□□□ -0.93
TPM1-229ENST00000561242 PLEKHG7Q6ZR37 379 aa9.27□□□□□ -0.93
TPM1-229ENST00000561242 WDFY1Q8IWB7 410 aa9.27□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms