RNA–Protein interactions for RNA: ENST00000561026.5

SNX1-213, Transcript of sorting nexin 1, humanhuman

TSL 1 (best) BASIC

Gene SNX1, Length 1,374 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-213ENST00000561026 VSX1Q9NZR4 365 aaPredicted RBP13.71□□□□□ -0.22
SNX1-213ENST00000561026 ASH2LQ9UBL3 628 aa13.71□□□□□ -0.22
SNX1-213ENST00000561026 COA3Q9Y2R0 106 aaPredicted RBP13.71□□□□□ -0.22
SNX1-213ENST00000561026 NPTNQ9Y639 398 aa13.71□□□□□ -0.22
SNX1-213ENST00000561026 OR6C6A6NF89 314 aa13.7□□□□□ -0.22
SNX1-213ENST00000561026 IGHV2-70P01814 119 aa13.7□□□□□ -0.22
SNX1-213ENST00000561026 SBK2P0C263 348 aa13.7□□□□□ -0.22
SNX1-213ENST00000561026 ADRA2CP18825 462 aa13.7□□□□□ -0.22
SNX1-213ENST00000561026 TNFSF4P23510 183 aa13.7□□□□□ -0.22
SNX1-213ENST00000561026 PSME3P61289 254 aa13.7□□□□□ -0.22
SNX1-213ENST00000561026 LCN2P80188 198 aa13.7□□□□□ -0.22
SNX1-213ENST00000561026 HNRNPA0Q13151 305 aaKnown RBP13.7□□□□□ -0.22
SNX1-213ENST00000561026 FGD3Q5JSP0 725 aa13.7□□□□□ -0.22
SNX1-213ENST00000561026 OTPQ5XKR4 325 aa13.7□□□□□ -0.22
SNX1-213ENST00000561026 ADCK1Q86TW2 530 aa13.7□□□□□ -0.22
SNX1-213ENST00000561026 OR2Z1Q8NG97 314 aa13.7□□□□□ -0.22
SNX1-213ENST00000561026 FAM216AQ8WUB2 273 aa13.7□□□□□ -0.22
SNX1-213ENST00000561026 SLC7A6Q92536 515 aa13.7□□□□□ -0.22
SNX1-213ENST00000561026 PTP4A1Q93096 173 aa13.7□□□□□ -0.22
SNX1-213ENST00000561026 CMTM5Q96DZ9 223 aa13.7□□□□□ -0.22
SNX1-213ENST00000561026 C7orf34Q96L11 122 aa13.7□□□□□ -0.22
SNX1-213ENST00000561026 NUAK2Q9H093 628 aa13.7□□□□□ -0.22
SNX1-213ENST00000561026 RERGLQ9H628 205 aa13.7□□□□□ -0.22
SNX1-213ENST00000561026 TMEM106BQ9NUM4 274 aa13.7□□□□□ -0.22
SNX1-213ENST00000561026 DCAF13Q9NV06 445 aaKnown RBP13.7□□□□□ -0.22
SNX1-213ENST00000561026 EGFL7Q9UHF1 273 aa13.7□□□□□ -0.22
SNX1-213ENST00000561026 IL20RAQ9UHF4 553 aa13.7□□□□□ -0.22
SNX1-213ENST00000561026 OPN4Q9UHM6 478 aa13.7□□□□□ -0.22
SNX1-213ENST00000561026 IER3IP1Q9Y5U9 82 aa13.7□□□□□ -0.22
SNX1-213ENST00000561026 PPIAL4EA0A075B759 164 aa13.69□□□□□ -0.22
SNX1-213ENST00000561026 PPIAL4CA0A0B4J2A2 164 aa13.69□□□□□ -0.22
SNX1-213ENST00000561026 TRBV4-1A0A0J9YWV2 114 aa13.69□□□□□ -0.22
SNX1-213ENST00000561026 PPIAL4DF5H284 164 aa13.69□□□□□ -0.22
SNX1-213ENST00000561026 SOCS2O14508 198 aa13.69□□□□□ -0.22
SNX1-213ENST00000561026 IMPA2O14732 288 aa13.69□□□□□ -0.22
SNX1-213ENST00000561026 TXNDC12O95881 172 aa13.69□□□□□ -0.22
SNX1-213ENST00000561026 PPIAL4FP0DN26 164 aa13.69□□□□□ -0.22
SNX1-213ENST00000561026 TNFRSF1AP19438 455 aa13.69□□□□□ -0.22
SNX1-213ENST00000561026 ZFP36P26651 326 aaKnown RBP13.69□□□□□ -0.22
SNX1-213ENST00000561026 FXYD6P3P58550 94 aa13.69□□□□□ -0.22
SNX1-213ENST00000561026 SEC23BQ15437 767 aa13.69□□□□□ -0.22
SNX1-213ENST00000561026 CCDC92Q53HC0 331 aaPredicted RBP13.69□□□□□ -0.22
SNX1-213ENST00000561026 GLYATQ6IB77 296 aa13.69□□□□□ -0.22
SNX1-213ENST00000561026 DPY19L2P2Q6ZN68 376 aa13.69□□□□□ -0.22
SNX1-213ENST00000561026 PTCHD4Q6ZW05 846 aa13.69□□□□□ -0.22
SNX1-213ENST00000561026 ZNF283Q8N7M2 679 aa13.69□□□□□ -0.22
SNX1-213ENST00000561026 OR1F12Q8NHA8 337 aa13.69□□□□□ -0.22
SNX1-213ENST00000561026 ST7LQ8TDW4 575 aa13.69□□□□□ -0.22
SNX1-213ENST00000561026 RSRC1Q96IZ7 334 aaKnown RBP13.69□□□□□ -0.22
SNX1-213ENST00000561026 JMJD8Q96S16 334 aa13.69□□□□□ -0.22
SNX1-213ENST00000561026 DCLRE1CQ96SD1 692 aaKnown RBP13.69□□□□□ -0.22
SNX1-213ENST00000561026 SPAG4Q9NPE6 437 aa13.69□□□□□ -0.22
SNX1-213ENST00000561026 MED4Q9NPJ6 270 aa13.69□□□□□ -0.22
SNX1-213ENST00000561026 ARHGAP32A7KAX9 2087 aa13.69□□□□□ -0.22
SNX1-213ENST00000561026 UNC119BA6NIH7 251 aa13.68□□□□□ -0.22
SNX1-213ENST00000561026 TRIM77I1YAP6 450 aa13.68□□□□□ -0.22
SNX1-213ENST00000561026 RER1O15258 196 aa13.68□□□□□ -0.22
SNX1-213ENST00000561026 FOXH1O75593 365 aa13.68□□□□□ -0.22
SNX1-213ENST00000561026 RAC2P15153 192 aa13.68□□□□□ -0.22
SNX1-213ENST00000561026 CFPP27918 469 aa13.68□□□□□ -0.22
SNX1-213ENST00000561026 RBMXP38159 391 aaKnown RBP13.68□□□□□ -0.22
SNX1-213ENST00000561026 CDKN2AP42771 156 aaKnown RBP13.68□□□□□ -0.22
SNX1-213ENST00000561026 RPS6KA3P51812 740 aa13.68□□□□□ -0.22
SNX1-213ENST00000561026 KCNMB1Q16558 191 aa13.68□□□□□ -0.22
SNX1-213ENST00000561026 C1orf94Q6P1W5 598 aa13.68□□□□□ -0.22
SNX1-213ENST00000561026 LRRC28Q86X40 367 aaPredicted RBP13.68□□□□□ -0.22
SNX1-213ENST00000561026 SPICQ8N5J4 248 aa13.68□□□□□ -0.22
SNX1-213ENST00000561026 FAM86B1Q8N7N1 296 aa13.68□□□□□ -0.22
SNX1-213ENST00000561026 DHRS1Q96LJ7 313 aa13.68□□□□□ -0.22
SNX1-213ENST00000561026 GPA33Q99795 319 aa13.68□□□□□ -0.22
SNX1-213ENST00000561026 FUZQ9BT04 418 aa13.68□□□□□ -0.22
SNX1-213ENST00000561026 MYLK2Q9H1R3 596 aa13.68□□□□□ -0.22
SNX1-213ENST00000561026 KRCC1Q9NPI7 259 aaPredicted RBP13.68□□□□□ -0.22
SNX1-213ENST00000561026 IL19Q9UHD0 177 aa13.68□□□□□ -0.22
SNX1-213ENST00000561026 ATPIF1Q9UII2 106 aa13.68□□□□□ -0.22
SNX1-213ENST00000561026 SAMD4AQ9UPU9 718 aaKnown RBP13.68□□□□□ -0.22
SNX1-213ENST00000561026 AURKCQ9UQB9 309 aa13.68□□□□□ -0.22
SNX1-213ENST00000561026 TANC2Q9HCD6 1990 aa13.67□□□□□ -0.22
SNX1-213ENST00000561026 J3QW42 95 aa13.67□□□□□ -0.22
SNX1-213ENST00000561026 SURF4O15260 269 aa13.67□□□□□ -0.22
SNX1-213ENST00000561026 DIRAS1O95057 198 aa13.67□□□□□ -0.22
SNX1-213ENST00000561026 FSHBP01225 129 aa13.67□□□□□ -0.22
SNX1-213ENST00000561026 DBHP09172 617 aa13.67□□□□□ -0.22
SNX1-213ENST00000561026 COMPP49747 757 aaPredicted RBP13.67□□□□□ -0.22
SNX1-213ENST00000561026 RGS6P49758 472 aa13.67□□□□□ -0.22
SNX1-213ENST00000561026 ERFP50548 548 aa13.67□□□□□ -0.22
SNX1-213ENST00000561026 ACTG1P63261 375 aa13.67□□□□□ -0.22
SNX1-213ENST00000561026 KRT72Q14CN4 511 aa13.67□□□□□ -0.22
SNX1-213ENST00000561026 TMEM155Q4W5P6 130 aa13.67□□□□□ -0.22
SNX1-213ENST00000561026 SMARCD3Q6STE5 483 aa13.67□□□□□ -0.22
SNX1-213ENST00000561026 KLHL36Q8N4N3 616 aa13.67□□□□□ -0.22
SNX1-213ENST00000561026 OR52J3Q8NH60 311 aa13.67□□□□□ -0.22
SNX1-213ENST00000561026 ITLN1Q8WWA0 313 aa13.67□□□□□ -0.22
SNX1-213ENST00000561026 SIGLEC11Q96RL6 698 aa13.67□□□□□ -0.22
SNX1-213ENST00000561026 SLC6A7Q99884 636 aa13.67□□□□□ -0.22
SNX1-213ENST00000561026 RBM4Q9BWF3 364 aaKnown RBP13.67□□□□□ -0.22
SNX1-213ENST00000561026 SUCNR1Q9BXA5 334 aa13.67□□□□□ -0.22
SNX1-213ENST00000561026 ADA2Q9NZK5 511 aa13.67□□□□□ -0.22
SNX1-213ENST00000561026 PPP1R3CQ9UQK1 317 aa13.67□□□□□ -0.22
SNX1-213ENST00000561026 DYSFO75923 2080 aa13.66□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms