RNA–Protein interactions for RNA: ENST00000560463.5

TRAF3-209, Transcript of TNF receptor associated factor 3, humanhuman

TSL 3

Gene TRAF3, Length 701 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3-209ENST00000560463 LOC100506127A0A0U1RQW1 187 aa7.56□□□□□ -1.2
TRAF3-209ENST00000560463 PNMA8CA0A1B0GUJ8 204 aa7.56□□□□□ -1.2
TRAF3-209ENST00000560463 ACOD1A6NK06 481 aa7.56□□□□□ -1.2
TRAF3-209ENST00000560463 TMEM212A6NML5 194 aa7.56□□□□□ -1.2
TRAF3-209ENST00000560463 TTLL8A6PVC2 850 aa7.56□□□□□ -1.2
TRAF3-209ENST00000560463 E9PI62 339 aa7.56□□□□□ -1.2
TRAF3-209ENST00000560463 PSMD9O00233 223 aa7.56□□□□□ -1.2
TRAF3-209ENST00000560463 MAGEB4O15481 346 aaPredicted RBP7.56□□□□□ -1.2
TRAF3-209ENST00000560463 ZNHIT1O43257 154 aa7.56□□□□□ -1.2
TRAF3-209ENST00000560463 SLC19A2O60779 497 aa7.56□□□□□ -1.2
TRAF3-209ENST00000560463 GATBO75879 557 aaKnown RBP7.56□□□□□ -1.2
TRAF3-209ENST00000560463 RGS9O75916 674 aaPredicted RBP7.56□□□□□ -1.2
TRAF3-209ENST00000560463 RPP14O95059 124 aaKnown RBP7.56□□□□□ -1.2
TRAF3-209ENST00000560463 TMIGD3P0DMS9 266 aaPredicted RBP7.56□□□□□ -1.2
TRAF3-209ENST00000560463 CD8BP10966 210 aa7.56□□□□□ -1.2
TRAF3-209ENST00000560463 HOXB1P14653 301 aaPredicted RBP7.56□□□□□ -1.2
TRAF3-209ENST00000560463 B4GALT1P15291 398 aa7.56□□□□□ -1.2
TRAF3-209ENST00000560463 CTSSP25774 331 aa7.56□□□□□ -1.2
TRAF3-209ENST00000560463 HSD11B1P28845 292 aa7.56□□□□□ -1.2
TRAF3-209ENST00000560463 CEACAM8P31997 349 aaPredicted RBP7.56□□□□□ -1.2
TRAF3-209ENST00000560463 UGT2B10P36537 528 aa7.56□□□□□ -1.2
TRAF3-209ENST00000560463 PSMB10P40306 273 aa7.56□□□□□ -1.2
TRAF3-209ENST00000560463 KIR2DL2P43627 348 aaPredicted RBP7.56□□□□□ -1.2
TRAF3-209ENST00000560463 GDI2P50395 445 aaKnown RBP7.56□□□□□ -1.2
TRAF3-209ENST00000560463 MMP16P51512 607 aa7.56□□□□□ -1.2
TRAF3-209ENST00000560463 VBP1P61758 197 aa7.56□□□□□ -1.2
TRAF3-209ENST00000560463 RPS25P62851 125 aaKnown RBP7.56□□□□□ -1.2
TRAF3-209ENST00000560463 ARF1P84077 181 aaKnown RBP7.56□□□□□ -1.2
TRAF3-209ENST00000560463 RAB35Q15286 201 aa7.56□□□□□ -1.2
TRAF3-209ENST00000560463 TAF13Q15543 124 aa7.56□□□□□ -1.2
TRAF3-209ENST00000560463 SLC36A2Q495M3 483 aa7.56□□□□□ -1.2
TRAF3-209ENST00000560463 YIF1BQ5BJH7 314 aa7.56□□□□□ -1.2
TRAF3-209ENST00000560463 ELFN2Q5R3F8 820 aa7.56□□□□□ -1.2
TRAF3-209ENST00000560463 OR7E24Q6IFN5 339 aa7.56□□□□□ -1.2
TRAF3-209ENST00000560463 ANKRD16Q6P6B7 361 aa7.56□□□□□ -1.2
TRAF3-209ENST00000560463 CORO6Q6QEF8 472 aa7.56□□□□□ -1.2
TRAF3-209ENST00000560463 ARL9Q6T311 187 aa7.56□□□□□ -1.2
TRAF3-209ENST00000560463 TFAP2EQ6VUC0 442 aa7.56□□□□□ -1.2
TRAF3-209ENST00000560463 ZNF813Q6ZN06 617 aa7.56□□□□□ -1.2
TRAF3-209ENST00000560463 CFAP77Q6ZQR2 320 aa7.56□□□□□ -1.2
TRAF3-209ENST00000560463 Q6ZT83 130 aa7.56□□□□□ -1.2
TRAF3-209ENST00000560463 BEND4Q6ZU67 534 aa7.56□□□□□ -1.2
TRAF3-209ENST00000560463 SLC16A14Q7RTX9 510 aa7.56□□□□□ -1.2
TRAF3-209ENST00000560463 ZC3HAV1Q7Z2W4 902 aaKnown RBP7.56□□□□□ -1.2
TRAF3-209ENST00000560463 CATSPERDQ86XM0 798 aa7.56□□□□□ -1.2
TRAF3-209ENST00000560463 CCDC36Q8IYA8 594 aa7.56□□□□□ -1.2
TRAF3-209ENST00000560463 GCNT2Q8N0V5 402 aa7.56□□□□□ -1.2
TRAF3-209ENST00000560463 LRRC18Q8N456 261 aa7.56□□□□□ -1.2
TRAF3-209ENST00000560463 ZFP41Q8N8Y5 198 aa7.56□□□□□ -1.2
TRAF3-209ENST00000560463 CNEP1R1Q8N9A8 125 aa7.56□□□□□ -1.2
TRAF3-209ENST00000560463 KBTBD8Q8NFY9 601 aa7.56□□□□□ -1.2
TRAF3-209ENST00000560463 OR2G2Q8NGZ5 317 aa7.56□□□□□ -1.2
TRAF3-209ENST00000560463 OR5AK2Q8NH90 309 aa7.56□□□□□ -1.2
TRAF3-209ENST00000560463 PHYHIPQ92561 330 aa7.56□□□□□ -1.2
TRAF3-209ENST00000560463 GHSRQ92847 366 aa7.56□□□□□ -1.2
TRAF3-209ENST00000560463 RPL3LQ92901 407 aaKnown RBP7.56□□□□□ -1.2
TRAF3-209ENST00000560463 FBXO17Q96EF6 278 aa7.56□□□□□ -1.2
TRAF3-209ENST00000560463 BOD1Q96IK1 185 aa7.56□□□□□ -1.2
TRAF3-209ENST00000560463 PGLYRP3Q96LB9 341 aa7.56□□□□□ -1.2
TRAF3-209ENST00000560463 ATF6BQ99941 703 aa7.56□□□□□ -1.2
TRAF3-209ENST00000560463 CHCHD6Q9BRQ6 235 aa7.56□□□□□ -1.2
TRAF3-209ENST00000560463 TMED9Q9BVK6 235 aa7.56□□□□□ -1.2
TRAF3-209ENST00000560463 HDHD2Q9H0R4 259 aa7.56□□□□□ -1.2
TRAF3-209ENST00000560463 MOB1AQ9H8S9 216 aa7.56□□□□□ -1.2
TRAF3-209ENST00000560463 EXOSC4Q9NPD3 245 aaKnown RBP7.56□□□□□ -1.2
TRAF3-209ENST00000560463 CENPMQ9NSP4 180 aa7.56□□□□□ -1.2
TRAF3-209ENST00000560463 DDX28Q9NUL7 540 aaKnown RBP7.56□□□□□ -1.2
TRAF3-209ENST00000560463 TXNL4BQ9NX01 149 aaKnown RBP7.56□□□□□ -1.2
TRAF3-209ENST00000560463 ATPIF1Q9UII2 106 aa7.56□□□□□ -1.2
TRAF3-209ENST00000560463 ZNF281Q9Y2X9 895 aa7.56□□□□□ -1.2
TRAF3-209ENST00000560463 GRIP1Q9Y3R0 1128 aa7.56□□□□□ -1.2
TRAF3-209ENST00000560463 TIMM10BQ9Y5J6 103 aa7.56□□□□□ -1.2
TRAF3-209ENST00000560463 FAM215AQ9Y5M1 114 aa7.56□□□□□ -1.2
TRAF3-209ENST00000560463 SIRT4Q9Y6E7 314 aaPredicted RBP7.56□□□□□ -1.2
TRAF3-209ENST00000560463 R4GMQ9 66 aa7.56□□□□□ -1.2
TRAF3-209ENST00000560463 PRR14LQ5THK1 2151 aa7.56□□□□□ -1.2
TRAF3-209ENST00000560463 TMEM269A0A1B0GVZ9 245 aa7.55□□□□□ -1.2
TRAF3-209ENST00000560463 GABRPO00591 440 aa7.55□□□□□ -1.2
TRAF3-209ENST00000560463 RER1O15258 196 aa7.55□□□□□ -1.2
TRAF3-209ENST00000560463 SGCEO43556 437 aa7.55□□□□□ -1.2
TRAF3-209ENST00000560463 SRSF10O75494 262 aaKnown RBP7.55□□□□□ -1.2
TRAF3-209ENST00000560463 GPX5O75715 221 aa7.55□□□□□ -1.2
TRAF3-209ENST00000560463 SC5DO75845 299 aa7.55□□□□□ -1.2
TRAF3-209ENST00000560463 TNFSF13O75888 250 aa7.55□□□□□ -1.2
TRAF3-209ENST00000560463 ATE1O95260 518 aa7.55□□□□□ -1.2
TRAF3-209ENST00000560463 IL18BPO95998 194 aa7.55□□□□□ -1.2
TRAF3-209ENST00000560463 IGHV3-9P01782 118 aa7.55□□□□□ -1.2
TRAF3-209ENST00000560463 ISG15P05161 165 aa7.55□□□□□ -1.2
TRAF3-209ENST00000560463 NR4A1P22736 598 aa7.55□□□□□ -1.2
TRAF3-209ENST00000560463 OTX1P32242 354 aaPredicted RBP7.55□□□□□ -1.2
TRAF3-209ENST00000560463 ARR3P36575 388 aa7.55□□□□□ -1.2
TRAF3-209ENST00000560463 NANOS3P60323 173 aaKnown RBP7.55□□□□□ -1.2
TRAF3-209ENST00000560463 PSMA6P60900 246 aaKnown RBP7.55□□□□□ -1.2
TRAF3-209ENST00000560463 LSM3P62310 102 aaKnown RBP7.55□□□□□ -1.2
TRAF3-209ENST00000560463 FABP5Q01469 135 aa7.55□□□□□ -1.2
TRAF3-209ENST00000560463 SLC3A1Q07837 685 aa7.55□□□□□ -1.2
TRAF3-209ENST00000560463 NFATC3Q12968 1075 aa7.55□□□□□ -1.2
TRAF3-209ENST00000560463 CCDC92Q53HC0 331 aaPredicted RBP7.55□□□□□ -1.2
TRAF3-209ENST00000560463 OTPQ5XKR4 325 aa7.55□□□□□ -1.2
TRAF3-209ENST00000560463 SEM1Q6ZVN7 128 aa7.55□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms