RNA–Protein interactions for RNA: ENST00000559989.1

CSPG4P12-202, Transcript of chondroitin sulfate proteoglycan 4 pseudogene 12, humanhuman

TSL 1 (best) BASIC

Gene CSPG4P12, Length 7,790 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P12-202ENST00000559989 G6PCP35575 357 aa12.72□□□□□ -0.37
CSPG4P12-202ENST00000559989 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa12.72□□□□□ -0.37
CSPG4P12-202ENST00000559989 OR1L1Q8NH94 360 aa12.72□□□□□ -0.37
CSPG4P12-202ENST00000559989 RHOFQ9HBH0 211 aa12.72□□□□□ -0.37
CSPG4P12-202ENST00000559989 NAGKQ9UJ70 344 aa12.72□□□□□ -0.37
CSPG4P12-202ENST00000559989 ZBTB32Q9Y2Y4 487 aaPredicted RBP12.72□□□□□ -0.37
CSPG4P12-202ENST00000559989 GPX3P22352 226 aa12.72□□□□□ -0.37
CSPG4P12-202ENST00000559989 SULT1A1P50225 295 aa12.72□□□□□ -0.37
CSPG4P12-202ENST00000559989 SRSF9Q13242 221 aaKnown RBP eCLIP12.72□□□□□ -0.37
CSPG4P12-202ENST00000559989 NEIL2Q969S2 332 aa12.72□□□□□ -0.37
CSPG4P12-202ENST00000559989 OR5V1Q9UGF6 321 aa12.72□□□□□ -0.37
CSPG4P12-202ENST00000559989 EDN1P05305 212 aa12.72□□□□□ -0.37
CSPG4P12-202ENST00000559989 CD37P11049 281 aa12.72□□□□□ -0.37
CSPG4P12-202ENST00000559989 BMP1P13497 986 aa12.72□□□□□ -0.37
CSPG4P12-202ENST00000559989 SMAGPQ0VAQ4 97 aa12.72□□□□□ -0.37
CSPG4P12-202ENST00000559989 MFSD4AQ8N468 514 aa12.72□□□□□ -0.37
CSPG4P12-202ENST00000559989 RGRP47804 291 aa12.72□□□□□ -0.37
CSPG4P12-202ENST00000559989 RUNX3Q13761 415 aa12.72□□□□□ -0.37
CSPG4P12-202ENST00000559989 DEFB132Q7Z7B7 95 aa12.72□□□□□ -0.37
CSPG4P12-202ENST00000559989 SLC39A11Q8N1S5 342 aa12.72□□□□□ -0.37
CSPG4P12-202ENST00000559989 GLIS1Q8NBF1 620 aa12.72□□□□□ -0.37
CSPG4P12-202ENST00000559989 OR2AK2Q8NG84 335 aa12.72□□□□□ -0.37
CSPG4P12-202ENST00000559989 GPR150Q8NGU9 434 aa12.72□□□□□ -0.37
CSPG4P12-202ENST00000559989 ZC3HAV1LQ96H79 300 aaKnown RBP12.72□□□□□ -0.37
CSPG4P12-202ENST00000559989 MS4A10Q96PG2 267 aa12.72□□□□□ -0.37
CSPG4P12-202ENST00000559989 TAAR9Q96RI9 348 aa12.72□□□□□ -0.37
CSPG4P12-202ENST00000559989 NTMT1Q9BV86 223 aa12.72□□□□□ -0.37
CSPG4P12-202ENST00000559989 SLC23A1Q9UHI7 598 aa12.72□□□□□ -0.37
CSPG4P12-202ENST00000559989 PSORS1C1Q9UIG5 152 aa12.72□□□□□ -0.37
CSPG4P12-202ENST00000559989 TTC3P53804 2025 aa12.72□□□□□ -0.37
CSPG4P12-202ENST00000559989 NQO2P16083 231 aa12.72□□□□□ -0.37
CSPG4P12-202ENST00000559989 VGLL2Q8N8G2 317 aa12.72□□□□□ -0.37
CSPG4P12-202ENST00000559989 SLC38A9Q8NBW4 561 aa12.72□□□□□ -0.37
CSPG4P12-202ENST00000559989 OR4F17Q8NGA8 305 aa12.72□□□□□ -0.37
CSPG4P12-202ENST00000559989 GJB5O95377 273 aa12.71□□□□□ -0.37
CSPG4P12-202ENST00000559989 HPP00738 406 aa12.71□□□□□ -0.37
CSPG4P12-202ENST00000559989 QDPRP09417 244 aa12.71□□□□□ -0.37
CSPG4P12-202ENST00000559989 SDC1P18827 310 aa12.71□□□□□ -0.37
CSPG4P12-202ENST00000559989 KCNJ10P78508 379 aa12.71□□□□□ -0.37
CSPG4P12-202ENST00000559989 SSX1Q16384 188 aa12.71□□□□□ -0.37
CSPG4P12-202ENST00000559989 TMEM88Q6PEY1 159 aa12.71□□□□□ -0.37
CSPG4P12-202ENST00000559989 TMEM147Q9BVK8 224 aa12.71□□□□□ -0.37
CSPG4P12-202ENST00000559989 ZMAT3Q9HA38 289 aaKnown RBP12.71□□□□□ -0.37
CSPG4P12-202ENST00000559989 SLCO1B1Q9Y6L6 691 aa12.71□□□□□ -0.37
CSPG4P12-202ENST00000559989 GCAP28676 217 aa12.71□□□□□ -0.37
CSPG4P12-202ENST00000559989 GNG4P50150 75 aa12.71□□□□□ -0.37
CSPG4P12-202ENST00000559989 CLEC12BQ2HXU8 276 aa12.71□□□□□ -0.37
CSPG4P12-202ENST00000559989 C17orf78Q8N4C9 275 aa12.71□□□□□ -0.37
CSPG4P12-202ENST00000559989 OR10D4PQ8NGN7 298 aa12.71□□□□□ -0.37
CSPG4P12-202ENST00000559989 GATA6Q92908 595 aa12.71□□□□□ -0.37
CSPG4P12-202ENST00000559989 ZDHHC16Q969W1 377 aa12.71□□□□□ -0.37
CSPG4P12-202ENST00000559989 TRAV34A0A0B4J273 112 aa12.71□□□□□ -0.37
CSPG4P12-202ENST00000559989 UBE2L5PA0A1B0GUS4 154 aa12.71□□□□□ -0.37
CSPG4P12-202ENST00000559989 TMEM218A2RU14 115 aa12.71□□□□□ -0.37
CSPG4P12-202ENST00000559989 ALPLP05186 524 aa12.71□□□□□ -0.37
CSPG4P12-202ENST00000559989 HOXC5Q00444 222 aa12.71□□□□□ -0.37
CSPG4P12-202ENST00000559989 IL10RAQ13651 578 aa12.71□□□□□ -0.37
CSPG4P12-202ENST00000559989 DEFB133Q30KQ1 61 aa12.71□□□□□ -0.37
CSPG4P12-202ENST00000559989 HSD17B13Q7Z5P4 300 aaPredicted RBP12.71□□□□□ -0.37
CSPG4P12-202ENST00000559989 ZNF429Q86V71 674 aa12.71□□□□□ -0.37
CSPG4P12-202ENST00000559989 DOLPP1Q86YN1 238 aa12.71□□□□□ -0.37
CSPG4P12-202ENST00000559989 IGSF8Q969P0 613 aa12.71□□□□□ -0.37
CSPG4P12-202ENST00000559989 RAB37Q96AX2 223 aa12.71□□□□□ -0.37
CSPG4P12-202ENST00000559989 ACPTQ9BZG2 426 aa12.71□□□□□ -0.37
CSPG4P12-202ENST00000559989 UBQLN3Q9H347 655 aa12.71□□□□□ -0.37
CSPG4P12-202ENST00000559989 PIAS3Q9Y6X2 628 aa12.71□□□□□ -0.37
CSPG4P12-202ENST00000559989 SLIT2O94813 1529 aa12.71□□□□□ -0.37
CSPG4P12-202ENST00000559989 CDC14CA4D256 554 aa12.71□□□□□ -0.37
CSPG4P12-202ENST00000559989 POU3F3P20264 500 aaPredicted RBP12.71□□□□□ -0.37
CSPG4P12-202ENST00000559989 ALOX5APP20292 161 aa12.71□□□□□ -0.37
CSPG4P12-202ENST00000559989 FKBP2P26885 142 aaKnown RBP12.71□□□□□ -0.37
CSPG4P12-202ENST00000559989 LYSMD2Q8IV50 215 aa12.71□□□□□ -0.37
CSPG4P12-202ENST00000559989 SIRT3Q9NTG7 399 aaPredicted RBP12.71□□□□□ -0.37
CSPG4P12-202ENST00000559989 FECHP22830 423 aa12.71□□□□□ -0.38
CSPG4P12-202ENST00000559989 SLC10A2Q12908 348 aaPredicted RBP12.71□□□□□ -0.38
CSPG4P12-202ENST00000559989 DCXRQ7Z4W1 244 aa12.71□□□□□ -0.38
CSPG4P12-202ENST00000559989 OR52E1Q8NGJ3 308 aa12.71□□□□□ -0.38
CSPG4P12-202ENST00000559989 OR13F1Q8NGS4 319 aa12.71□□□□□ -0.38
CSPG4P12-202ENST00000559989 GPX8Q8TED1 209 aa12.71□□□□□ -0.38
CSPG4P12-202ENST00000559989 UTS2O95399 124 aa12.71□□□□□ -0.38
CSPG4P12-202ENST00000559989 HOXA10P31260 410 aaPredicted RBP12.71□□□□□ -0.38
CSPG4P12-202ENST00000559989 SRP9P49458 86 aaKnown RBP12.71□□□□□ -0.38
CSPG4P12-202ENST00000559989 LINC00346Q8IVM7 164 aa12.71□□□□□ -0.38
CSPG4P12-202ENST00000559989 NAT6Q93015 286 aa12.71□□□□□ -0.38
CSPG4P12-202ENST00000559989 SLCO3A1Q9UIG8 710 aa12.71□□□□□ -0.38
CSPG4P12-202ENST00000559989 ARR3P36575 388 aa12.7□□□□□ -0.38
CSPG4P12-202ENST00000559989 RBP2P50120 134 aa12.7□□□□□ -0.38
CSPG4P12-202ENST00000559989 B2MP61769 119 aa12.7□□□□□ -0.38
CSPG4P12-202ENST00000559989 CLEC18AA5D8T8 446 aa12.7□□□□□ -0.38
CSPG4P12-202ENST00000559989 C1orf105O95561 183 aa12.7□□□□□ -0.38
CSPG4P12-202ENST00000559989 POU2F2P09086 479 aa12.7□□□□□ -0.38
CSPG4P12-202ENST00000559989 C6orf201Q7Z4U5 140 aa12.7□□□□□ -0.38
CSPG4P12-202ENST00000559989 CLEC18CQ8NCF0 446 aa12.7□□□□□ -0.38
CSPG4P12-202ENST00000559989 TWSG1Q9GZX9 223 aa12.7□□□□□ -0.38
CSPG4P12-202ENST00000559989 KCNK15Q9H427 330 aa12.7□□□□□ -0.38
CSPG4P12-202ENST00000559989 C12orf49Q9H741 205 aa12.7□□□□□ -0.38
CSPG4P12-202ENST00000559989 LANCL2Q9NS86 450 aa12.7□□□□□ -0.38
CSPG4P12-202ENST00000559989 DIMT1Q9UNQ2 313 aaKnown RBP12.7□□□□□ -0.38
CSPG4P12-202ENST00000559989 DNASE2O00115 360 aaPredicted RBP12.7□□□□□ -0.38
CSPG4P12-202ENST00000559989 BCL3P20749 454 aa12.7□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 82.1 ms