RNA–Protein interactions for RNA: ENST00000559898.5

HDDC3-205, Transcript of HD domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene HDDC3, Length 1,024 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC3-205ENST00000559898 PSKH1P11801 424 aa15□□□□□ -0.01
HDDC3-205ENST00000559898 HIST1H1CP16403 213 aaKnown RBP15□□□□□ -0.01
HDDC3-205ENST00000559898 ATP6V1B2P21281 511 aa15□□□□□ -0.01
HDDC3-205ENST00000559898 RRM2P31350 389 aa15□□□□□ -0.01
HDDC3-205ENST00000559898 CENPAP49450 140 aa15□□□□□ -0.01
HDDC3-205ENST00000559898 FAHD2BQ6P2I3 314 aaPredicted RBP15□□□□□ -0.01
HDDC3-205ENST00000559898 LEG1Q6P5S2 330 aa15□□□□□ -0.01
HDDC3-205ENST00000559898 SMARCD3Q6STE5 483 aa15□□□□□ -0.01
HDDC3-205ENST00000559898 GLB1L2Q8IW92 636 aa15□□□□□ -0.01
HDDC3-205ENST00000559898 DEFB107AQ8IZN7 70 aa15□□□□□ -0.01
HDDC3-205ENST00000559898 OR5AS1Q8N127 324 aa15□□□□□ -0.01
HDDC3-205ENST00000559898 OR6V1Q8N148 313 aa15□□□□□ -0.01
HDDC3-205ENST00000559898 OR4K13Q8NH42 304 aa15□□□□□ -0.01
HDDC3-205ENST00000559898 ZNRF4Q8WWF5 429 aa15□□□□□ -0.01
HDDC3-205ENST00000559898 FAHD2AQ96GK7 314 aa15□□□□□ -0.01
HDDC3-205ENST00000559898 DCLRE1CQ96SD1 692 aaKnown RBP15□□□□□ -0.01
HDDC3-205ENST00000559898 ELOVL3Q9HB03 270 aa15□□□□□ -0.01
HDDC3-205ENST00000559898 PTTG3PQ9NZH4 202 aa15□□□□□ -0.01
HDDC3-205ENST00000559898 TAGLN3Q9UI15 199 aa15□□□□□ -0.01
HDDC3-205ENST00000559898 PURGQ9UJV8 347 aaKnown RBP15□□□□□ -0.01
HDDC3-205ENST00000559898 NDRG4Q9ULP0 352 aaKnown RBP15□□□□□ -0.01
HDDC3-205ENST00000559898 B9D1Q9UPM9 204 aa15□□□□□ -0.01
HDDC3-205ENST00000559898 CLDN25C9JDP6 229 aa14.99□□□□□ -0.01
HDDC3-205ENST00000559898 AHCYL1O43865 530 aa14.99□□□□□ -0.01
HDDC3-205ENST00000559898 VENTXO95231 258 aa14.99□□□□□ -0.01
HDDC3-205ENST00000559898 ADH4P08319 380 aa14.99□□□□□ -0.01
HDDC3-205ENST00000559898 COX5BP10606 129 aa14.99□□□□□ -0.01
HDDC3-205ENST00000559898 ADRA2CP18825 462 aa14.99□□□□□ -0.01
HDDC3-205ENST00000559898 SCRN3Q0VDG4 424 aa14.99□□□□□ -0.01
HDDC3-205ENST00000559898 CDK5R2Q13319 367 aa14.99□□□□□ -0.01
HDDC3-205ENST00000559898 AQP6Q13520 282 aa14.99□□□□□ -0.01
HDDC3-205ENST00000559898 HFEQ30201 348 aa14.99□□□□□ -0.01
HDDC3-205ENST00000559898 RFX4Q33E94 735 aa14.99□□□□□ -0.01
HDDC3-205ENST00000559898 MTX3Q5HYI7 312 aa14.99□□□□□ -0.01
HDDC3-205ENST00000559898 FAM209AQ5JX71 171 aa14.99□□□□□ -0.01
HDDC3-205ENST00000559898 GPR139Q6DWJ6 353 aa14.99□□□□□ -0.01
HDDC3-205ENST00000559898 CYP2R1Q6VVX0 501 aa14.99□□□□□ -0.01
HDDC3-205ENST00000559898 NAA40Q86UY6 237 aa14.99□□□□□ -0.01
HDDC3-205ENST00000559898 LINC00346Q8IVM7 164 aa14.99□□□□□ -0.01
HDDC3-205ENST00000559898 OR51F2Q8NH61 342 aa14.99□□□□□ -0.01
HDDC3-205ENST00000559898 OR1F12Q8NHA8 337 aa14.99□□□□□ -0.01
HDDC3-205ENST00000559898 ELMOD3Q96FG2 381 aa14.99□□□□□ -0.01
HDDC3-205ENST00000559898 NSMCE2Q96MF7 247 aa14.99□□□□□ -0.01
HDDC3-205ENST00000559898 TMPRSS13Q9BYE2 586 aa14.99□□□□□ -0.01
HDDC3-205ENST00000559898 EGLN3Q9H6Z9 239 aa14.99□□□□□ -0.01
HDDC3-205ENST00000559898 TBCCD1Q9NVR7 557 aa14.99□□□□□ -0.01
HDDC3-205ENST00000559898 IGHV3-64DA0A0J9YX35 117 aa14.98□□□□□ -0.01
HDDC3-205ENST00000559898 PLSCR5A0PG75 271 aa14.98□□□□□ -0.01
HDDC3-205ENST00000559898 OR6C68A6NDL8 312 aa14.98□□□□□ -0.01
HDDC3-205ENST00000559898 H0YL77 283 aa14.98□□□□□ -0.01
HDDC3-205ENST00000559898 ZFP36P26651 326 aaKnown RBP14.98□□□□□ -0.01
HDDC3-205ENST00000559898 RPS27P42677 84 aaKnown RBP14.98□□□□□ -0.01
HDDC3-205ENST00000559898 GSSP48637 474 aa14.98□□□□□ -0.01
HDDC3-205ENST00000559898 RPS6KA3P51812 740 aa14.98□□□□□ -0.01
HDDC3-205ENST00000559898 ARHGDIAP52565 204 aa14.98□□□□□ -0.01
HDDC3-205ENST00000559898 SEC61A1P61619 476 aaKnown RBP14.98□□□□□ -0.01
HDDC3-205ENST00000559898 LSM6P62312 80 aaKnown RBP14.98□□□□□ -0.01
HDDC3-205ENST00000559898 HIST1H3AP68431 136 aa14.98□□□□□ -0.01
HDDC3-205ENST00000559898 TNFAIP6P98066 277 aaPredicted RBP14.98□□□□□ -0.01
HDDC3-205ENST00000559898 KRT72Q14CN4 511 aa14.98□□□□□ -0.01
HDDC3-205ENST00000559898 KCNMB1Q16558 191 aa14.98□□□□□ -0.01
HDDC3-205ENST00000559898 MOGQ16653 247 aa14.98□□□□□ -0.01
HDDC3-205ENST00000559898 SLC35F1Q5T1Q4 408 aa14.98□□□□□ -0.01
HDDC3-205ENST00000559898 HIST2H3PS2Q5TEC6 136 aa14.98□□□□□ -0.01
HDDC3-205ENST00000559898 PGBD2Q6P3X8 592 aa14.98□□□□□ -0.01
HDDC3-205ENST00000559898 LYPD4Q6UWN0 246 aa14.98□□□□□ -0.01
HDDC3-205ENST00000559898 CFAP77Q6ZQR2 320 aa14.98□□□□□ -0.01
HDDC3-205ENST00000559898 HIST2H3AQ71DI3 136 aa14.98□□□□□ -0.01
HDDC3-205ENST00000559898 SDR9C7Q8NEX9 313 aa14.98□□□□□ -0.01
HDDC3-205ENST00000559898 OR2Z1Q8NG97 314 aa14.98□□□□□ -0.01
HDDC3-205ENST00000559898 OR9Q2Q8NGE9 314 aa14.98□□□□□ -0.01
HDDC3-205ENST00000559898 ITLN1Q8WWA0 313 aa14.98□□□□□ -0.01
HDDC3-205ENST00000559898 NSRP1Q9H0G5 558 aaKnown RBP14.98□□□□□ -0.01
HDDC3-205ENST00000559898 WDR76Q9H967 626 aa14.98□□□□□ -0.01
HDDC3-205ENST00000559898 VNN3Q9NY84 501 aa14.98□□□□□ -0.01
HDDC3-205ENST00000559898 MAGEL2Q9UJ55 1249 aa14.98□□□□□ -0.01
HDDC3-205ENST00000559898 ARL2BPQ9Y2Y0 163 aa14.98□□□□□ -0.01
HDDC3-205ENST00000559898 ISPDA4D126 451 aa14.97□□□□□ -0.01
HDDC3-205ENST00000559898 OR10H3O60404 316 aa14.97□□□□□ -0.01
HDDC3-205ENST00000559898 MT-ND5P03915 603 aa14.97□□□□□ -0.01
HDDC3-205ENST00000559898 FABP3P05413 133 aa14.97□□□□□ -0.01
HDDC3-205ENST00000559898 CD55P08174 381 aa14.97□□□□□ -0.01
HDDC3-205ENST00000559898 KITLGP21583 273 aa14.97□□□□□ -0.01
HDDC3-205ENST00000559898 TEKQ02763 1124 aa14.97□□□□□ -0.01
HDDC3-205ENST00000559898 SAMD4BQ5PRF9 694 aaKnown RBP14.97□□□□□ -0.01
HDDC3-205ENST00000559898 OR2T2Q6IF00 324 aa14.97□□□□□ -0.01
HDDC3-205ENST00000559898 ACSM5Q6NUN0 579 aa14.97□□□□□ -0.01
HDDC3-205ENST00000559898 ADCK1Q86TW2 530 aa14.97□□□□□ -0.01
HDDC3-205ENST00000559898 ZDHHC21Q8IVQ6 265 aa14.97□□□□□ -0.01
HDDC3-205ENST00000559898 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP14.97□□□□□ -0.01
HDDC3-205ENST00000559898 OR8D4Q8NGM9 314 aa14.97□□□□□ -0.01
HDDC3-205ENST00000559898 SIGLEC11Q96RL6 698 aa14.97□□□□□ -0.01
HDDC3-205ENST00000559898 BTBD10Q9BSF8 475 aa14.97□□□□□ -0.01
HDDC3-205ENST00000559898 IFT27Q9BW83 186 aa14.97□□□□□ -0.01
HDDC3-205ENST00000559898 PLA2G12AQ9BZM1 189 aa14.97□□□□□ -0.01
HDDC3-205ENST00000559898 RPRD1BQ9NQG5 326 aaKnown RBP14.97□□□□□ -0.01
HDDC3-205ENST00000559898 UBAP1Q9NZ09 502 aa14.97□□□□□ -0.01
HDDC3-205ENST00000559898 WNK2Q9Y3S1 2297 aa14.97□□□□□ -0.01
HDDC3-205ENST00000559898 TCRBV5S2A0A599 114 aa14.96□□□□□ -0.01
HDDC3-205ENST00000559898 C5orf63A6NC05 138 aa14.96□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms