RNA–Protein interactions for RNA: ENST00000559850.5

RABGGTA-211, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 3

Gene RABGGTA, Length 534 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-211ENST00000559850 DDOQ99489 341 aa12.69□□□□□ -0.38
RABGGTA-211ENST00000559850 PIMREGQ9BSJ6 248 aa12.69□□□□□ -0.38
RABGGTA-211ENST00000559850 BPESC1Q9GZL8 116 aa12.69□□□□□ -0.38
RABGGTA-211ENST00000559850 RACGAP1Q9H0H5 632 aa12.69□□□□□ -0.38
RABGGTA-211ENST00000559850 MRPL22Q9NWU5 206 aaKnown RBP12.69□□□□□ -0.38
RABGGTA-211ENST00000559850 NDRG4Q9ULP0 352 aaKnown RBP12.69□□□□□ -0.38
RABGGTA-211ENST00000559850 GRIP1Q9Y3R0 1128 aa12.69□□□□□ -0.38
RABGGTA-211ENST00000559850 IGHV4-61A0A0C4DH41 118 aa12.68□□□□□ -0.38
RABGGTA-211ENST00000559850 LOC390937A0A1W2PQ73 354 aa12.68□□□□□ -0.38
RABGGTA-211ENST00000559850 OR6C6A6NF89 314 aa12.68□□□□□ -0.38
RABGGTA-211ENST00000559850 H3BN98 237 aa12.68□□□□□ -0.38
RABGGTA-211ENST00000559850 E2F6O75461 281 aa12.68□□□□□ -0.38
RABGGTA-211ENST00000559850 ABHD16AO95870 558 aa12.68□□□□□ -0.38
RABGGTA-211ENST00000559850 GSTM3P21266 225 aa12.68□□□□□ -0.38
RABGGTA-211ENST00000559850 COL8A2P25067 703 aa12.68□□□□□ -0.38
RABGGTA-211ENST00000559850 LOXL1Q08397 574 aaPredicted RBP12.68□□□□□ -0.38
RABGGTA-211ENST00000559850 HNRNPA0Q13151 305 aaKnown RBP12.68□□□□□ -0.38
RABGGTA-211ENST00000559850 TRIP10Q15642 601 aa12.68□□□□□ -0.38
RABGGTA-211ENST00000559850 TSTQ16762 297 aaKnown RBP12.68□□□□□ -0.38
RABGGTA-211ENST00000559850 TMEM249Q2WGJ8 235 aa12.68□□□□□ -0.38
RABGGTA-211ENST00000559850 ZNF718Q3SXZ3 478 aa12.68□□□□□ -0.38
RABGGTA-211ENST00000559850 ELFN2Q5R3F8 820 aa12.68□□□□□ -0.38
RABGGTA-211ENST00000559850 LNX2Q8N448 690 aa12.68□□□□□ -0.38
RABGGTA-211ENST00000559850 PROKR2Q8NFJ6 384 aa12.68□□□□□ -0.38
RABGGTA-211ENST00000559850 KLF14Q8TD94 323 aaPredicted RBP12.68□□□□□ -0.38
RABGGTA-211ENST00000559850 POP5Q969H6 163 aaKnown RBP12.68□□□□□ -0.38
RABGGTA-211ENST00000559850 YIPF5Q969M3 257 aa12.68□□□□□ -0.38
RABGGTA-211ENST00000559850 POM121Q96HA1 1249 aa12.68□□□□□ -0.38
RABGGTA-211ENST00000559850 WACQ9BTA9 647 aa12.68□□□□□ -0.38
RABGGTA-211ENST00000559850 MS4A5Q9H3V2 200 aa12.68□□□□□ -0.38
RABGGTA-211ENST00000559850 MED20Q9H944 212 aa12.68□□□□□ -0.38
RABGGTA-211ENST00000559850 HINT3Q9NQE9 182 aaKnown RBP12.68□□□□□ -0.38
RABGGTA-211ENST00000559850 YAE1D1Q9NRH1 226 aa12.68□□□□□ -0.38
RABGGTA-211ENST00000559850 STARD10Q9Y365 291 aa12.68□□□□□ -0.38
RABGGTA-211ENST00000559850 NSD1Q96L73 2696 aaPredicted RBP12.67□□□□□ -0.38
RABGGTA-211ENST00000559850 LRP5LA4QPB2 252 aa12.67□□□□□ -0.38
RABGGTA-211ENST00000559850 FAM183AA6NL82 134 aa12.67□□□□□ -0.38
RABGGTA-211ENST00000559850 C17orf100A8MU93 164 aa12.67□□□□□ -0.38
RABGGTA-211ENST00000559850 CDC14BO60729 498 aa12.67□□□□□ -0.38
RABGGTA-211ENST00000559850 COX5BP10606 129 aa12.67□□□□□ -0.38
RABGGTA-211ENST00000559850 USF1P22415 310 aaPredicted RBP12.67□□□□□ -0.38
RABGGTA-211ENST00000559850 POU1F1P28069 291 aa12.67□□□□□ -0.38
RABGGTA-211ENST00000559850 GCH1P30793 250 aa12.67□□□□□ -0.38
RABGGTA-211ENST00000559850 GGT2P36268 569 aa12.67□□□□□ -0.38
RABGGTA-211ENST00000559850 RBMXP38159 391 aaKnown RBP12.67□□□□□ -0.38
RABGGTA-211ENST00000559850 SELENOVP59797 346 aa12.67□□□□□ -0.38
RABGGTA-211ENST00000559850 HIST1H3AP68431 136 aa12.67□□□□□ -0.38
RABGGTA-211ENST00000559850 HIST2H3PS2Q5TEC6 136 aa12.67□□□□□ -0.38
RABGGTA-211ENST00000559850 SLC18B1Q6NT16 456 aa12.67□□□□□ -0.38
RABGGTA-211ENST00000559850 HIST2H3AQ71DI3 136 aa12.67□□□□□ -0.38
RABGGTA-211ENST00000559850 ZNF786Q8N393 782 aa12.67□□□□□ -0.38
RABGGTA-211ENST00000559850 PAPD5Q8NDF8 572 aaKnown RBP12.67□□□□□ -0.38
RABGGTA-211ENST00000559850 OR2T33Q8NG76 320 aa12.67□□□□□ -0.38
RABGGTA-211ENST00000559850 TEX47Q8TBZ9 253 aa12.67□□□□□ -0.38
RABGGTA-211ENST00000559850 SNX33Q8WV41 574 aa12.67□□□□□ -0.38
RABGGTA-211ENST00000559850 HCAR1Q9BXC0 346 aa12.67□□□□□ -0.38
RABGGTA-211ENST00000559850 NTN4Q9HB63 628 aa12.67□□□□□ -0.38
RABGGTA-211ENST00000559850 DNAJB9Q9UBS3 223 aa12.67□□□□□ -0.38
RABGGTA-211ENST00000559850 FBXO9Q9UK97 447 aaPredicted RBP12.67□□□□□ -0.38
RABGGTA-211ENST00000559850 FN1P02751 2386 aaKnown RBP12.67□□□□□ -0.38
RABGGTA-211ENST00000559850 C2CD3Q4AC94 2353 aa12.67□□□□□ -0.38
RABGGTA-211ENST00000559850 TLN2Q9Y4G6 2542 aa12.66□□□□□ -0.38
RABGGTA-211ENST00000559850 CSPG4Q6UVK1 2322 aa12.66□□□□□ -0.38
RABGGTA-211ENST00000559850 ZSCAN5BA6NJL1 495 aa12.66□□□□□ -0.38
RABGGTA-211ENST00000559850 NDUFS8O00217 210 aa12.66□□□□□ -0.38
RABGGTA-211ENST00000559850 SPRY3O43610 288 aa12.66□□□□□ -0.38
RABGGTA-211ENST00000559850 IGHV3-13P01766 116 aa12.66□□□□□ -0.38
RABGGTA-211ENST00000559850 ZNF16P17020 682 aaPredicted RBP12.66□□□□□ -0.38
RABGGTA-211ENST00000559850 RASSF2P50749 326 aa12.66□□□□□ -0.38
RABGGTA-211ENST00000559850 ARHGDIAP52565 204 aa12.66□□□□□ -0.38
RABGGTA-211ENST00000559850 CCL8P80075 99 aa12.66□□□□□ -0.38
RABGGTA-211ENST00000559850 COX10Q12887 443 aa12.66□□□□□ -0.38
RABGGTA-211ENST00000559850 CCNIQ14094 377 aa12.66□□□□□ -0.38
RABGGTA-211ENST00000559850 SPRNQ5BIV9 151 aa12.66□□□□□ -0.38
RABGGTA-211ENST00000559850 ZNF511Q8NB15 262 aa12.66□□□□□ -0.38
RABGGTA-211ENST00000559850 GJC3Q8NFK1 279 aa12.66□□□□□ -0.38
RABGGTA-211ENST00000559850 OTULINQ96BN8 352 aa12.66□□□□□ -0.38
RABGGTA-211ENST00000559850 RBM4Q9BWF3 364 aaKnown RBP12.66□□□□□ -0.38
RABGGTA-211ENST00000559850 CDADC1Q9BWV3 514 aa12.66□□□□□ -0.38
RABGGTA-211ENST00000559850 WDR76Q9H967 626 aa12.66□□□□□ -0.38
RABGGTA-211ENST00000559850 ELOVL3Q9HB03 270 aa12.66□□□□□ -0.38
RABGGTA-211ENST00000559850 MSL2Q9HCI7 577 aa12.66□□□□□ -0.38
RABGGTA-211ENST00000559850 MYOZ1Q9NP98 299 aaPredicted RBP12.66□□□□□ -0.38
RABGGTA-211ENST00000559850 SLCO1C1Q9NYB5 712 aa12.66□□□□□ -0.38
RABGGTA-211ENST00000559850 PTTG3PQ9NZH4 202 aa12.66□□□□□ -0.38
RABGGTA-211ENST00000559850 ARRDC5A6NEK1 342 aa12.65□□□□□ -0.38
RABGGTA-211ENST00000559850 TPD52L2O43399 206 aaKnown RBP12.65□□□□□ -0.38
RABGGTA-211ENST00000559850 CD5LO43866 347 aa12.65□□□□□ -0.38
RABGGTA-211ENST00000559850 ICMTO60725 284 aa12.65□□□□□ -0.38
RABGGTA-211ENST00000559850 ATP5HO75947 161 aa12.65□□□□□ -0.38
RABGGTA-211ENST00000559850 IGHV4-31P0DP07 118 aa12.65□□□□□ -0.38
RABGGTA-211ENST00000559850 ZNF823P16415 610 aa12.65□□□□□ -0.38
RABGGTA-211ENST00000559850 IL2RGP31785 369 aa12.65□□□□□ -0.38
RABGGTA-211ENST00000559850 ZNF81P51508 661 aa12.65□□□□□ -0.38
RABGGTA-211ENST00000559850 MMP15P51511 669 aa12.65□□□□□ -0.38
RABGGTA-211ENST00000559850 PRSS12P56730 875 aa12.65□□□□□ -0.38
RABGGTA-211ENST00000559850 PSG7Q13046 419 aa12.65□□□□□ -0.38
RABGGTA-211ENST00000559850 GK3PQ14409 553 aa12.65□□□□□ -0.38
RABGGTA-211ENST00000559850 GINS1Q14691 196 aa12.65□□□□□ -0.38
RABGGTA-211ENST00000559850 HLXQ14774 488 aaPredicted RBP12.65□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms