RNA–Protein interactions for RNA: ENST00000559844.5

SNX1-208, Transcript of sorting nexin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNX1, Length 1,971 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-208ENST00000559844 ORAI1Q96D31 301 aa15.8■□□□□ 0.12
SNX1-208ENST00000559844 PIGQQ9BRB3 760 aa15.8■□□□□ 0.12
SNX1-208ENST00000559844 RBFOX1Q9NWB1 397 aaKnown RBP15.8■□□□□ 0.12
SNX1-208ENST00000559844 IGKV1D-43A0A0B4J1Z2 117 aa15.79■□□□□ 0.12
SNX1-208ENST00000559844 ZNF726A6NNF4 738 aa15.79■□□□□ 0.12
SNX1-208ENST00000559844 LYRM1O43325 122 aa15.79■□□□□ 0.12
SNX1-208ENST00000559844 ZIC3O60481 467 aa15.79■□□□□ 0.12
SNX1-208ENST00000559844 SP1P08047 785 aa15.79■□□□□ 0.12
SNX1-208ENST00000559844 ZNF766Q5HY98 468 aa15.79■□□□□ 0.12
SNX1-208ENST00000559844 HES5Q5TA89 166 aa15.79■□□□□ 0.12
SNX1-208ENST00000559844 AGAP6Q5VW22 663 aa15.79■□□□□ 0.12
SNX1-208ENST00000559844 ZNF57Q68EA5 555 aaPredicted RBP15.79■□□□□ 0.12
SNX1-208ENST00000559844 LRRTM1Q86UE6 522 aa15.79■□□□□ 0.12
SNX1-208ENST00000559844 UBQLNLQ8IYU4 475 aa15.79■□□□□ 0.12
SNX1-208ENST00000559844 ST7LQ8TDW4 575 aa15.79■□□□□ 0.12
SNX1-208ENST00000559844 TMEM106AQ96A25 262 aa15.79■□□□□ 0.12
SNX1-208ENST00000559844 NAA11Q9BSU3 229 aaPredicted RBP15.79■□□□□ 0.12
SNX1-208ENST00000559844 THAP7Q9BT49 309 aaPredicted RBP15.79■□□□□ 0.12
SNX1-208ENST00000559844 GTF2A1LQ9UNN4 478 aa15.79■□□□□ 0.12
SNX1-208ENST00000559844 CAMK2AQ9UQM7 478 aa15.79■□□□□ 0.12
SNX1-208ENST00000559844 TRAV17A0A0B4J275 112 aa15.78■□□□□ 0.12
SNX1-208ENST00000559844 A0A0G2JMM0 328 aa15.78■□□□□ 0.12
SNX1-208ENST00000559844 A0A1W2PPB8 328 aa15.78■□□□□ 0.12
SNX1-208ENST00000559844 A0A1W2PRS3 328 aa15.78■□□□□ 0.12
SNX1-208ENST00000559844 OR2M5A3KFT3 312 aa15.78■□□□□ 0.12
SNX1-208ENST00000559844 KIR3DP1A8MWS1 328 aa15.78■□□□□ 0.12
SNX1-208ENST00000559844 SRD5A2P31213 254 aa15.78■□□□□ 0.12
SNX1-208ENST00000559844 SCAND1P57086 179 aa15.78■□□□□ 0.12
SNX1-208ENST00000559844 CSNK2A1P68400 391 aaPredicted RBP15.78■□□□□ 0.12
SNX1-208ENST00000559844 SLC25A25Q6KCM7 469 aa15.78■□□□□ 0.12
SNX1-208ENST00000559844 RBMXL3Q8N7X1 1067 aaKnown RBP15.78■□□□□ 0.12
SNX1-208ENST00000559844 C11orf40Q8WZ69 217 aa15.78■□□□□ 0.12
SNX1-208ENST00000559844 MCHR2Q969V1 340 aa15.78■□□□□ 0.12
SNX1-208ENST00000559844 ETV7Q9Y603 341 aa15.78■□□□□ 0.12
SNX1-208ENST00000559844 NBEAQ8NFP9 2946 aa15.78■□□□□ 0.12
SNX1-208ENST00000559844 A0A0B4J203 849 aa15.78■□□□□ 0.12
SNX1-208ENST00000559844 ANXA2P2A6NMY6 339 aa15.78■□□□□ 0.12
SNX1-208ENST00000559844 ERVH48-1M5A8F1 160 aa15.78■□□□□ 0.12
SNX1-208ENST00000559844 NME2P1O60361 137 aa15.78■□□□□ 0.12
SNX1-208ENST00000559844 SRSF10O75494 262 aaKnown RBP15.78■□□□□ 0.12
SNX1-208ENST00000559844 VAMP5O95183 116 aa15.78■□□□□ 0.12
SNX1-208ENST00000559844 PNPP00491 289 aa15.78■□□□□ 0.12
SNX1-208ENST00000559844 ANXA2P07355 339 aaKnown RBP15.78■□□□□ 0.12
SNX1-208ENST00000559844 NME2P22392 152 aa15.78■□□□□ 0.12
SNX1-208ENST00000559844 RAC1P63000 192 aa15.78■□□□□ 0.12
SNX1-208ENST00000559844 CAMK2DQ13557 499 aa15.78■□□□□ 0.12
SNX1-208ENST00000559844 GALNTL5Q7Z4T8 443 aa15.78■□□□□ 0.12
SNX1-208ENST00000559844 HIST2H2ABQ8IUE6 130 aaPredicted RBP15.78■□□□□ 0.12
SNX1-208ENST00000559844 OR10AC1Q8NH08 325 aa15.78■□□□□ 0.12
SNX1-208ENST00000559844 SCMH1Q96GD3 660 aa15.78■□□□□ 0.12
SNX1-208ENST00000559844 DEPPQ9NTK1 212 aa15.78■□□□□ 0.12
SNX1-208ENST00000559844 SLC22A13Q9Y226 551 aa15.78■□□□□ 0.12
SNX1-208ENST00000559844 A0A1W2PPL8 197 aa15.77■□□□□ 0.12
SNX1-208ENST00000559844 ZNF814B7Z6K7 855 aa15.77■□□□□ 0.12
SNX1-208ENST00000559844 CTDSPLO15194 276 aa15.77■□□□□ 0.12
SNX1-208ENST00000559844 H2BFMP0C1H6 154 aa15.77■□□□□ 0.12
SNX1-208ENST00000559844 DNASE1L1P49184 302 aa15.77■□□□□ 0.12
SNX1-208ENST00000559844 MMP15P51511 669 aa15.77■□□□□ 0.12
SNX1-208ENST00000559844 H3F3AP84243 136 aa15.77■□□□□ 0.12
SNX1-208ENST00000559844 MFGE8Q08431 387 aaPredicted RBP15.77■□□□□ 0.12
SNX1-208ENST00000559844 ODF4Q2M2E3 257 aa15.77■□□□□ 0.12
SNX1-208ENST00000559844 SLC25A47Q6Q0C1 308 aa15.77■□□□□ 0.12
SNX1-208ENST00000559844 LINC00346Q8IVM7 164 aa15.77■□□□□ 0.12
SNX1-208ENST00000559844 TMEM178AQ8NBL3 297 aa15.77■□□□□ 0.12
SNX1-208ENST00000559844 DUSP18Q8NEJ0 188 aa15.77■□□□□ 0.12
SNX1-208ENST00000559844 RNF133Q8WVZ7 376 aa15.77■□□□□ 0.12
SNX1-208ENST00000559844 ABHD1Q96SE0 405 aa15.77■□□□□ 0.12
SNX1-208ENST00000559844 C1orf198Q9H425 327 aa15.77■□□□□ 0.12
SNX1-208ENST00000559844 LIN7BQ9HAP6 207 aa15.77■□□□□ 0.12
SNX1-208ENST00000559844 CLEC4AQ9UMR7 237 aa15.77■□□□□ 0.12
SNX1-208ENST00000559844 DHDHQ9UQ10 334 aa15.77■□□□□ 0.12
SNX1-208ENST00000559844 KLF13Q9Y2Y9 288 aaPredicted RBP15.77■□□□□ 0.12
SNX1-208ENST00000559844 TLN1Q9Y490 2541 aaKnown RBP15.77■□□□□ 0.11
SNX1-208ENST00000559844 TTLL8A6PVC2 850 aa15.76■□□□□ 0.11
SNX1-208ENST00000559844 CD2P06729 351 aa15.76■□□□□ 0.11
SNX1-208ENST00000559844 FREM3P0C091 2139 aa15.76■□□□□ 0.11
SNX1-208ENST00000559844 CNR1P21554 472 aa15.76■□□□□ 0.11
SNX1-208ENST00000559844 DCTDP32321 178 aa15.76■□□□□ 0.11
SNX1-208ENST00000559844 KIR2DL3P43628 341 aa15.76■□□□□ 0.11
SNX1-208ENST00000559844 ZNF169Q14929 603 aaPredicted RBP15.76■□□□□ 0.11
SNX1-208ENST00000559844 POU4F3Q15319 338 aa15.76■□□□□ 0.11
SNX1-208ENST00000559844 PLET1Q6UQ28 207 aa15.76■□□□□ 0.11
SNX1-208ENST00000559844 ZNF704Q6ZNC4 412 aaPredicted RBP15.76■□□□□ 0.11
SNX1-208ENST00000559844 Q6ZS92 163 aa15.76■□□□□ 0.11
SNX1-208ENST00000559844 SULF2Q8IWU5 870 aa15.76■□□□□ 0.11
SNX1-208ENST00000559844 RAB40AQ8WXH6 277 aa15.76■□□□□ 0.11
SNX1-208ENST00000559844 TRIM63Q969Q1 353 aa15.76■□□□□ 0.11
SNX1-208ENST00000559844 MMP28Q9H239 520 aa15.76■□□□□ 0.11
SNX1-208ENST00000559844 RNF121Q9H920 327 aa15.76■□□□□ 0.11
SNX1-208ENST00000559844 FOXJ3Q9UPW0 622 aa15.76■□□□□ 0.11
SNX1-208ENST00000559844 NCKAP5O14513 1909 aa15.76■□□□□ 0.11
SNX1-208ENST00000559844 A0A1B0GVC2 190 aa15.76■□□□□ 0.11
SNX1-208ENST00000559844 FAM240BA0A1B0GVZ2 78 aa15.76■□□□□ 0.11
SNX1-208ENST00000559844 A6NIN4 97 aa15.76■□□□□ 0.11
SNX1-208ENST00000559844 DNPH1O43598 174 aa15.76■□□□□ 0.11
SNX1-208ENST00000559844 WNT11O96014 354 aa15.76■□□□□ 0.11
SNX1-208ENST00000559844 ISG15P05161 165 aa15.76■□□□□ 0.11
SNX1-208ENST00000559844 ADRA2CP18825 462 aa15.76■□□□□ 0.11
SNX1-208ENST00000559844 ACHEP22303 614 aa15.76■□□□□ 0.11
SNX1-208ENST00000559844 CFPP27918 469 aa15.76■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 52.3 ms