RNA–Protein interactions for RNA: ENST00000559822.1

SPG11-219, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 5

Gene SPG11, Length 561 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-219ENST00000559822 UBAP1Q9NZ09 502 aa10.39□□□□□ -0.75
SPG11-219ENST00000559822 ABCD2Q9UBJ2 740 aa10.39□□□□□ -0.75
SPG11-219ENST00000559822 PURGQ9UJV8 347 aaKnown RBP10.39□□□□□ -0.75
SPG11-219ENST00000559822 SIGLEC7Q9Y286 467 aa10.39□□□□□ -0.75
SPG11-219ENST00000559822 POLR1DQ9Y2S0 133 aa10.39□□□□□ -0.75
SPG11-219ENST00000559822 NPTNQ9Y639 398 aa10.39□□□□□ -0.75
SPG11-219ENST00000559822 TANC2Q9HCD6 1990 aa10.39□□□□□ -0.75
SPG11-219ENST00000559822 PPIAL4EA0A075B759 164 aa10.38□□□□□ -0.75
SPG11-219ENST00000559822 PPIAL4CA0A0B4J2A2 164 aa10.38□□□□□ -0.75
SPG11-219ENST00000559822 PPIAL4DF5H284 164 aa10.38□□□□□ -0.75
SPG11-219ENST00000559822 IFNL4K9M1U5 179 aa10.38□□□□□ -0.75
SPG11-219ENST00000559822 SLC16A7O60669 478 aa10.38□□□□□ -0.75
SPG11-219ENST00000559822 SCG5P05408 212 aa10.38□□□□□ -0.75
SPG11-219ENST00000559822 PPIAL4FP0DN26 164 aa10.38□□□□□ -0.75
SPG11-219ENST00000559822 NCK1P16333 377 aa10.38□□□□□ -0.75
SPG11-219ENST00000559822 LIMS1P48059 325 aa10.38□□□□□ -0.75
SPG11-219ENST00000559822 SMIM11AP58511 58 aa10.38□□□□□ -0.75
SPG11-219ENST00000559822 HILS1P60008 231 aa10.38□□□□□ -0.75
SPG11-219ENST00000559822 PSME3P61289 254 aa10.38□□□□□ -0.75
SPG11-219ENST00000559822 TMEM255AQ5JRV8 349 aa10.38□□□□□ -0.75
SPG11-219ENST00000559822 GLYATQ6IB77 296 aa10.38□□□□□ -0.75
SPG11-219ENST00000559822 DPY19L2P2Q6ZN68 376 aa10.38□□□□□ -0.75
SPG11-219ENST00000559822 BPIFB2Q8N4F0 458 aa10.38□□□□□ -0.75
SPG11-219ENST00000559822 OR2Z1Q8NG97 314 aa10.38□□□□□ -0.75
SPG11-219ENST00000559822 OR1F12Q8NHA8 337 aa10.38□□□□□ -0.75
SPG11-219ENST00000559822 PTP4A1Q93096 173 aa10.38□□□□□ -0.75
SPG11-219ENST00000559822 SAMD8Q96LT4 415 aa10.38□□□□□ -0.75
SPG11-219ENST00000559822 C7orf69Q9H7B7 122 aa10.38□□□□□ -0.75
SPG11-219ENST00000559822 TMEM106BQ9NUM4 274 aa10.38□□□□□ -0.75
SPG11-219ENST00000559822 ZNF446Q9NWS9 450 aa10.38□□□□□ -0.75
SPG11-219ENST00000559822 VSX1Q9NZR4 365 aaPredicted RBP10.38□□□□□ -0.75
SPG11-219ENST00000559822 NDUFAF4Q9P032 175 aa10.38□□□□□ -0.75
SPG11-219ENST00000559822 ASH2LQ9UBL3 628 aa10.38□□□□□ -0.75
SPG11-219ENST00000559822 IL19Q9UHD0 177 aa10.38□□□□□ -0.75
SPG11-219ENST00000559822 OR6C6A6NF89 314 aa10.37□□□□□ -0.75
SPG11-219ENST00000559822 UNC119BA6NIH7 251 aa10.37□□□□□ -0.75
SPG11-219ENST00000559822 SOCS2O14508 198 aa10.37□□□□□ -0.75
SPG11-219ENST00000559822 PTP4A3O75365 173 aa10.37□□□□□ -0.75
SPG11-219ENST00000559822 TXNDC12O95881 172 aa10.37□□□□□ -0.75
SPG11-219ENST00000559822 IGHV2-70P01814 119 aa10.37□□□□□ -0.75
SPG11-219ENST00000559822 SBK2P0C263 348 aa10.37□□□□□ -0.75
SPG11-219ENST00000559822 RAC2P15153 192 aa10.37□□□□□ -0.75
SPG11-219ENST00000559822 ZNF26P17031 533 aaPredicted RBP10.37□□□□□ -0.75
SPG11-219ENST00000559822 FPR2P25090 351 aa10.37□□□□□ -0.75
SPG11-219ENST00000559822 CRABP1P29762 137 aa10.37□□□□□ -0.75
SPG11-219ENST00000559822 PRDX6P30041 224 aa10.37□□□□□ -0.75
SPG11-219ENST00000559822 OMPP47874 163 aa10.37□□□□□ -0.75
SPG11-219ENST00000559822 TMEM155Q4W5P6 130 aa10.37□□□□□ -0.75
SPG11-219ENST00000559822 SLC27A4Q6P1M0 643 aa10.37□□□□□ -0.75
SPG11-219ENST00000559822 C1orf229Q6ZS94 237 aaPredicted RBP10.37□□□□□ -0.75
SPG11-219ENST00000559822 GJC3Q8NFK1 279 aa10.37□□□□□ -0.75
SPG11-219ENST00000559822 FAM216AQ8WUB2 273 aa10.37□□□□□ -0.75
SPG11-219ENST00000559822 HAVCR1Q96D42 359 aa10.37□□□□□ -0.75
SPG11-219ENST00000559822 CMBLQ96DG6 245 aa10.37□□□□□ -0.75
SPG11-219ENST00000559822 HDHD2Q9H0R4 259 aa10.37□□□□□ -0.75
SPG11-219ENST00000559822 DCAF13Q9NV06 445 aaKnown RBP10.37□□□□□ -0.75
SPG11-219ENST00000559822 EGFL7Q9UHF1 273 aa10.37□□□□□ -0.75
SPG11-219ENST00000559822 PPP1R3CQ9UQK1 317 aa10.37□□□□□ -0.75
SPG11-219ENST00000559822 COA3Q9Y2R0 106 aaPredicted RBP10.37□□□□□ -0.75
SPG11-219ENST00000559822 IER3IP1Q9Y5U9 82 aa10.37□□□□□ -0.75
SPG11-219ENST00000559822 WNK2Q9Y3S1 2297 aa10.36□□□□□ -0.75
SPG11-219ENST00000559822 IMPA2O14732 288 aa10.36□□□□□ -0.75
SPG11-219ENST00000559822 AVPP01185 164 aa10.36□□□□□ -0.75
SPG11-219ENST00000559822 CPT2P23786 658 aa10.36□□□□□ -0.75
SPG11-219ENST00000559822 MDH2P40926 338 aaKnown RBP10.36□□□□□ -0.75
SPG11-219ENST00000559822 CENPAP49450 140 aa10.36□□□□□ -0.75
SPG11-219ENST00000559822 BTG1P62324 171 aa10.36□□□□□ -0.75
SPG11-219ENST00000559822 LCN2P80188 198 aa10.36□□□□□ -0.75
SPG11-219ENST00000559822 KCNMB1Q16558 191 aa10.36□□□□□ -0.75
SPG11-219ENST00000559822 C1orf94Q6P1W5 598 aa10.36□□□□□ -0.75
SPG11-219ENST00000559822 SMARCD3Q6STE5 483 aa10.36□□□□□ -0.75
SPG11-219ENST00000559822 TSEN54Q7Z6J9 526 aaKnown RBP10.36□□□□□ -0.75
SPG11-219ENST00000559822 MUC20Q8N307 709 aaPredicted RBP10.36□□□□□ -0.75
SPG11-219ENST00000559822 ZNF283Q8N7M2 679 aa10.36□□□□□ -0.75
SPG11-219ENST00000559822 FANK1Q8TC84 345 aa10.36□□□□□ -0.75
SPG11-219ENST00000559822 GCDHQ92947 438 aaPredicted RBP10.36□□□□□ -0.75
SPG11-219ENST00000559822 APOBEC3DQ96AK3 386 aaPredicted RBP10.36□□□□□ -0.75
SPG11-219ENST00000559822 MCUR1Q96AQ8 359 aa10.36□□□□□ -0.75
SPG11-219ENST00000559822 ZMYND19Q96E35 227 aaPredicted RBP10.36□□□□□ -0.75
SPG11-219ENST00000559822 DHRS1Q96LJ7 313 aa10.36□□□□□ -0.75
SPG11-219ENST00000559822 OR2V2Q96R30 315 aa10.36□□□□□ -0.75
SPG11-219ENST00000559822 COQ7Q99807 217 aa10.36□□□□□ -0.75
SPG11-219ENST00000559822 NUAK2Q9H093 628 aa10.36□□□□□ -0.75
SPG11-219ENST00000559822 NSRP1Q9H0G5 558 aaKnown RBP10.36□□□□□ -0.75
SPG11-219ENST00000559822 NTN4Q9HB63 628 aa10.36□□□□□ -0.75
SPG11-219ENST00000559822 ADA2Q9NZK5 511 aa10.36□□□□□ -0.75
SPG11-219ENST00000559822 MAGEL2Q9UJ55 1249 aa10.36□□□□□ -0.75
SPG11-219ENST00000559822 STARD10Q9Y365 291 aa10.36□□□□□ -0.75
SPG11-219ENST00000559822 TRBV4-1A0A0J9YWV2 114 aa10.35□□□□□ -0.75
SPG11-219ENST00000559822 RGS9O75916 674 aaPredicted RBP10.35□□□□□ -0.75
SPG11-219ENST00000559822 RENP00797 406 aa10.35□□□□□ -0.75
SPG11-219ENST00000559822 ADRA2CP18825 462 aa10.35□□□□□ -0.75
SPG11-219ENST00000559822 SLC6A6P31641 620 aa10.35□□□□□ -0.75
SPG11-219ENST00000559822 IFNGR2P38484 337 aa10.35□□□□□ -0.75
SPG11-219ENST00000559822 SRP9P49458 86 aaKnown RBP10.35□□□□□ -0.75
SPG11-219ENST00000559822 COMPP49747 757 aaPredicted RBP10.35□□□□□ -0.75
SPG11-219ENST00000559822 CCDC92Q53HC0 331 aaPredicted RBP10.35□□□□□ -0.75
SPG11-219ENST00000559822 FBXW12Q6X9E4 464 aa10.35□□□□□ -0.75
SPG11-219ENST00000559822 RBMS3Q6XE24 437 aaKnown RBP10.35□□□□□ -0.75
SPG11-219ENST00000559822 ZNF771Q7L3S4 317 aaPredicted RBP10.35□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms