RNA–Protein interactions for RNA: ENST00000559711.5

USP3-213, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 5 BASIC

Gene USP3, Length 1,693 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-213ENST00000559711 HTRA1Q92743 480 aa11.2□□□□□ -0.62
USP3-213ENST00000559711 TMEM106AQ96A25 262 aa11.2□□□□□ -0.62
USP3-213ENST00000559711 ORAI1Q96D31 301 aa11.2□□□□□ -0.62
USP3-213ENST00000559711 GFI1Q99684 422 aa11.2□□□□□ -0.62
USP3-213ENST00000559711 DEFB127Q9H1M4 99 aa11.2□□□□□ -0.62
USP3-213ENST00000559711 ABRACLQ9P1F3 81 aa11.2□□□□□ -0.62
USP3-213ENST00000559711 ADAM30Q9UKF2 790 aa11.2□□□□□ -0.62
USP3-213ENST00000559711 MCTS1Q9ULC4 181 aaKnown RBP11.2□□□□□ -0.62
USP3-213ENST00000559711 AK6Q9Y3D8 172 aaKnown RBP11.2□□□□□ -0.62
USP3-213ENST00000559711 LIPGQ9Y5X9 500 aa11.2□□□□□ -0.62
USP3-213ENST00000559711 CELSR3Q9NYQ7 3312 aa11.19□□□□□ -0.62
USP3-213ENST00000559711 ZNF724A8MTY0 619 aa11.19□□□□□ -0.62
USP3-213ENST00000559711 RER1O15258 196 aa11.19□□□□□ -0.62
USP3-213ENST00000559711 TBX1O43435 398 aa11.19□□□□□ -0.62
USP3-213ENST00000559711 IGHG3P01860 377 aa11.19□□□□□ -0.62
USP3-213ENST00000559711 ATF1P18846 271 aa11.19□□□□□ -0.62
USP3-213ENST00000559711 NPR2P20594 1047 aa11.19□□□□□ -0.62
USP3-213ENST00000559711 ACHEP22303 614 aa11.19□□□□□ -0.62
USP3-213ENST00000559711 PTBP1P26599 531 aaKnown RBP eCLIP11.19□□□□□ -0.62
USP3-213ENST00000559711 ODF4Q2M2E3 257 aa11.19□□□□□ -0.62
USP3-213ENST00000559711 TMEM244Q5VVB8 128 aa11.19□□□□□ -0.62
USP3-213ENST00000559711 KLHL24Q6TFL4 600 aa11.19□□□□□ -0.62
USP3-213ENST00000559711 LRRTM1Q86UE6 522 aa11.19□□□□□ -0.62
USP3-213ENST00000559711 LYSMD2Q8IV50 215 aa11.19□□□□□ -0.62
USP3-213ENST00000559711 GPR137CQ8N3F9 429 aa11.19□□□□□ -0.62
USP3-213ENST00000559711 GJC3Q8NFK1 279 aa11.19□□□□□ -0.62
USP3-213ENST00000559711 ASB5Q8WWX0 329 aa11.19□□□□□ -0.62
USP3-213ENST00000559711 ZNF837Q96EG3 531 aaPredicted RBP11.19□□□□□ -0.62
USP3-213ENST00000559711 WDYHV1Q96HA8 205 aa11.19□□□□□ -0.62
USP3-213ENST00000559711 SRRQ9GZT4 340 aa11.19□□□□□ -0.62
USP3-213ENST00000559711 SLITRK2Q9H156 845 aa11.19□□□□□ -0.62
USP3-213ENST00000559711 LDAHQ9H6V9 325 aa11.19□□□□□ -0.62
USP3-213ENST00000559711 TCF7L1Q9HCS4 588 aa11.19□□□□□ -0.62
USP3-213ENST00000559711 DDX28Q9NUL7 540 aaKnown RBP11.19□□□□□ -0.62
USP3-213ENST00000559711 EMC3Q9P0I2 261 aa11.19□□□□□ -0.62
USP3-213ENST00000559711 GTF2A1LQ9UNN4 478 aa11.19□□□□□ -0.62
USP3-213ENST00000559711 KLK10O43240 276 aa11.18□□□□□ -0.62
USP3-213ENST00000559711 GFRA3O60609 400 aa11.18□□□□□ -0.62
USP3-213ENST00000559711 SLC2A2P11168 524 aaPredicted RBP11.18□□□□□ -0.62
USP3-213ENST00000559711 PSMA6P60900 246 aaKnown RBP11.18□□□□□ -0.62
USP3-213ENST00000559711 BCL2L15Q5TBC7 163 aa11.18□□□□□ -0.62
USP3-213ENST00000559711 STEAP3Q658P3 488 aa11.18□□□□□ -0.62
USP3-213ENST00000559711 CNIH2Q6PI25 160 aa11.18□□□□□ -0.62
USP3-213ENST00000559711 FAM131AQ6UXB0 335 aa11.18□□□□□ -0.62
USP3-213ENST00000559711 IGFL3Q6UXB1 125 aa11.18□□□□□ -0.62
USP3-213ENST00000559711 DCDC5Q6ZRR9 648 aa11.18□□□□□ -0.62
USP3-213ENST00000559711 ELMOD2Q8IZ81 293 aa11.18□□□□□ -0.62
USP3-213ENST00000559711 GDPD1Q8N9F7 314 aa11.18□□□□□ -0.62
USP3-213ENST00000559711 FNDC9Q8TBE3 224 aa11.18□□□□□ -0.62
USP3-213ENST00000559711 LINC00470Q9BZP3 86 aa11.18□□□□□ -0.62
USP3-213ENST00000559711 SLC25A18Q9H1K4 315 aa11.18□□□□□ -0.62
USP3-213ENST00000559711 PPP1R3EQ9H7J1 279 aa11.18□□□□□ -0.62
USP3-213ENST00000559711 MOB1AQ9H8S9 216 aa11.18□□□□□ -0.62
USP3-213ENST00000559711 BCO1Q9HAY6 547 aa11.18□□□□□ -0.62
USP3-213ENST00000559711 CRLF2Q9HC73 371 aa11.18□□□□□ -0.62
USP3-213ENST00000559711 ABCB10Q9NRK6 738 aa11.18□□□□□ -0.62
USP3-213ENST00000559711 CYSLTR2Q9NS75 346 aa11.18□□□□□ -0.62
USP3-213ENST00000559711 PARPBPQ9NWS1 579 aa11.18□□□□□ -0.62
USP3-213ENST00000559711 SPRR3Q9UBC9 169 aa11.18□□□□□ -0.62
USP3-213ENST00000559711 HHLA2Q9UM44 414 aa11.18□□□□□ -0.62
USP3-213ENST00000559711 SSUH2Q9Y2M2 353 aa11.18□□□□□ -0.62
USP3-213ENST00000559711 V9GY05 133 aa11.18□□□□□ -0.62
USP3-213ENST00000559711 CACNA1CQ13936 2221 aa11.18□□□□□ -0.62
USP3-213ENST00000559711 TRAV8-7A0A075B6U6 113 aa11.17□□□□□ -0.62
USP3-213ENST00000559711 IFITM5A6NNB3 132 aa11.17□□□□□ -0.62
USP3-213ENST00000559711 AIPO00170 330 aa11.17□□□□□ -0.62
USP3-213ENST00000559711 PAHP00439 452 aa11.17□□□□□ -0.62
USP3-213ENST00000559711 UBCP0CG48 685 aaKnown RBP11.17□□□□□ -0.62
USP3-213ENST00000559711 ADRA2CP18825 462 aa11.17□□□□□ -0.62
USP3-213ENST00000559711 ELK1P19419 428 aa11.17□□□□□ -0.62
USP3-213ENST00000559711 PSMD7P51665 324 aa11.17□□□□□ -0.62
USP3-213ENST00000559711 GRB2P62993 217 aaKnown RBP11.17□□□□□ -0.62
USP3-213ENST00000559711 RIN1Q13671 783 aa11.17□□□□□ -0.62
USP3-213ENST00000559711 OXA1LQ15070 435 aa11.17□□□□□ -0.62
USP3-213ENST00000559711 RNPS1Q15287 305 aaKnown RBP11.17□□□□□ -0.62
USP3-213ENST00000559711 LINGO2Q7L985 606 aa11.17□□□□□ -0.62
USP3-213ENST00000559711 LRRC28Q86X40 367 aaPredicted RBP11.17□□□□□ -0.62
USP3-213ENST00000559711 CENPSQ8N2Z9 138 aa11.17□□□□□ -0.62
USP3-213ENST00000559711 TRMT10AQ8TBZ6 339 aaKnown RBP11.17□□□□□ -0.62
USP3-213ENST00000559711 TSEN15Q8WW01 171 aaKnown RBP11.17□□□□□ -0.62
USP3-213ENST00000559711 PBOV1Q9GZY1 135 aa11.17□□□□□ -0.62
USP3-213ENST00000559711 GPR35Q9HC97 309 aa11.17□□□□□ -0.62
USP3-213ENST00000559711 TMEM38BQ9NVV0 291 aa11.17□□□□□ -0.62
USP3-213ENST00000559711 NUFIP1Q9UHK0 495 aaKnown RBP11.17□□□□□ -0.62
USP3-213ENST00000559711 WASF3Q9UPY6 502 aa11.17□□□□□ -0.62
USP3-213ENST00000559711 DHDHQ9UQ10 334 aa11.17□□□□□ -0.62
USP3-213ENST00000559711 NOSIPQ9Y314 301 aaKnown RBP11.17□□□□□ -0.62
USP3-213ENST00000559711 AKAP13Q12802 2813 aa11.17□□□□□ -0.62
USP3-213ENST00000559711 LOC107986453A0A1B0GWG9 222 aa11.17□□□□□ -0.62
USP3-213ENST00000559711 OR6C65A6NJZ3 312 aa11.17□□□□□ -0.62
USP3-213ENST00000559711 TTLL8A6PVC2 850 aa11.17□□□□□ -0.62
USP3-213ENST00000559711 MRPL33O75394 65 aaKnown RBP11.17□□□□□ -0.62
USP3-213ENST00000559711 TTRP02766 147 aa11.17□□□□□ -0.62
USP3-213ENST00000559711 CST2P09228 141 aa11.17□□□□□ -0.62
USP3-213ENST00000559711 ZNF24P17028 368 aa11.17□□□□□ -0.62
USP3-213ENST00000559711 SDHBP21912 280 aa11.17□□□□□ -0.62
USP3-213ENST00000559711 HSD11B1P28845 292 aa11.17□□□□□ -0.62
USP3-213ENST00000559711 PMP22Q01453 160 aa11.17□□□□□ -0.62
USP3-213ENST00000559711 FOXC1Q12948 553 aa11.17□□□□□ -0.62
USP3-213ENST00000559711 TAF13Q15543 124 aa11.17□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms