RNA–Protein interactions for RNA: ENST00000558561.1

SPG11-211, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 3

Gene SPG11, Length 555 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-211ENST00000558561 FOXN4Q96NZ1 517 aa3.66□□□□□ -1.82
SPG11-211ENST00000558561 OR2M2Q96R28 347 aa3.66□□□□□ -1.82
SPG11-211ENST00000558561 SIKE1Q9BRV8 207 aa3.66□□□□□ -1.82
SPG11-211ENST00000558561 ZNF426Q9BUY5 554 aa3.66□□□□□ -1.82
SPG11-211ENST00000558561 EFCAB1Q9HAE3 211 aa3.66□□□□□ -1.82
SPG11-211ENST00000558561 SLC17A5Q9NRA2 495 aa3.66□□□□□ -1.82
SPG11-211ENST00000558561 GLRX2Q9NS18 164 aa3.66□□□□□ -1.82
SPG11-211ENST00000558561 GID8Q9NWU2 228 aa3.66□□□□□ -1.82
SPG11-211ENST00000558561 THUMPD1Q9NXG2 353 aaKnown RBP3.66□□□□□ -1.82
SPG11-211ENST00000558561 PAQR5Q9NXK6 330 aaPredicted RBP3.66□□□□□ -1.82
SPG11-211ENST00000558561 ADA2Q9NZK5 511 aa3.66□□□□□ -1.82
SPG11-211ENST00000558561 ZNF224Q9NZL3 707 aa3.66□□□□□ -1.82
SPG11-211ENST00000558561 KLHL9Q9P2J3 617 aa3.66□□□□□ -1.82
SPG11-211ENST00000558561 RPS6KB2Q9UBS0 482 aa3.66□□□□□ -1.82
SPG11-211ENST00000558561 IL20RAQ9UHF4 553 aa3.66□□□□□ -1.82
SPG11-211ENST00000558561 MOKQ9UQ07 419 aa3.66□□□□□ -1.82
SPG11-211ENST00000558561 ANGPT4Q9Y264 503 aa3.66□□□□□ -1.82
SPG11-211ENST00000558561 ZFHX3Q15911 3703 aa3.66□□□□□ -1.82
SPG11-211ENST00000558561 ZANQ9Y493 2812 aa3.65□□□□□ -1.82
SPG11-211ENST00000558561 TRAV27A0A087WT01 109 aa3.65□□□□□ -1.83
SPG11-211ENST00000558561 A0A0A0MQY5 61 aa3.65□□□□□ -1.83
SPG11-211ENST00000558561 TRBV5-7A0A0A0MS05 114 aa3.65□□□□□ -1.83
SPG11-211ENST00000558561 IGHV1-18A0A0C4DH31 117 aa3.65□□□□□ -1.83
SPG11-211ENST00000558561 TRBV4-1A0A0J9YWV2 114 aa3.65□□□□□ -1.83
SPG11-211ENST00000558561 TMEM129A0AVI4 362 aa3.65□□□□□ -1.83
SPG11-211ENST00000558561 TRAPPC13A5PLN9 417 aa3.65□□□□□ -1.83
SPG11-211ENST00000558561 OR5H1A6NKK0 313 aa3.65□□□□□ -1.83
SPG11-211ENST00000558561 ENO4A6NNW6 628 aa3.65□□□□□ -1.83
SPG11-211ENST00000558561 H7C1C5 153 aa3.65□□□□□ -1.83
SPG11-211ENST00000558561 SOCS2O14508 198 aa3.65□□□□□ -1.83
SPG11-211ENST00000558561 DYNC1I1O14576 645 aa3.65□□□□□ -1.83
SPG11-211ENST00000558561 ABCD4O14678 606 aa3.65□□□□□ -1.83
SPG11-211ENST00000558561 CHP2O43745 196 aa3.65□□□□□ -1.83
SPG11-211ENST00000558561 GPRIN2O60269 458 aa3.65□□□□□ -1.83
SPG11-211ENST00000558561 EIF1BO60739 113 aaKnown RBP3.65□□□□□ -1.83
SPG11-211ENST00000558561 CCDC22O60826 627 aa3.65□□□□□ -1.83
SPG11-211ENST00000558561 PTP4A3O75365 173 aa3.65□□□□□ -1.83
SPG11-211ENST00000558561 TRMUO75648 421 aaKnown RBP3.65□□□□□ -1.83
SPG11-211ENST00000558561 PDE5AO76074 875 aa3.65□□□□□ -1.83
SPG11-211ENST00000558561 OR7A10O76100 309 aa3.65□□□□□ -1.83
SPG11-211ENST00000558561 HLA-HP01893 362 aa3.65□□□□□ -1.83
SPG11-211ENST00000558561 SEMG1P04279 462 aa3.65□□□□□ -1.83
SPG11-211ENST00000558561 LCKP06239 509 aa3.65□□□□□ -1.83
SPG11-211ENST00000558561 ASAH2BP0C7U1 165 aa3.65□□□□□ -1.83
SPG11-211ENST00000558561 IFI30P13284 250 aa3.65□□□□□ -1.83
SPG11-211ENST00000558561 ZNF43P17038 809 aa3.65□□□□□ -1.83
SPG11-211ENST00000558561 GGT1P19440 569 aa3.65□□□□□ -1.83
SPG11-211ENST00000558561 ATP6V1B2P21281 511 aa3.65□□□□□ -1.83
SPG11-211ENST00000558561 ANOS1P23352 680 aa3.65□□□□□ -1.83
SPG11-211ENST00000558561 CDAP32320 146 aa3.65□□□□□ -1.83
SPG11-211ENST00000558561 BIDP55957 195 aa3.65□□□□□ -1.83
SPG11-211ENST00000558561 TAS2R41P59536 307 aa3.65□□□□□ -1.83
SPG11-211ENST00000558561 LCN6P62502 163 aa3.65□□□□□ -1.83
SPG11-211ENST00000558561 IRX1P78414 480 aaPredicted RBP3.65□□□□□ -1.83
SPG11-211ENST00000558561 IL1RL1Q01638 556 aa3.65□□□□□ -1.83
SPG11-211ENST00000558561 ROR2Q01974 943 aaKnown RBP3.65□□□□□ -1.83
SPG11-211ENST00000558561 POU3F1Q03052 451 aaPredicted RBP3.65□□□□□ -1.83
SPG11-211ENST00000558561 FMODQ06828 376 aa3.65□□□□□ -1.83
SPG11-211ENST00000558561 RPL18Q07020 188 aaKnown RBP3.65□□□□□ -1.83
SPG11-211ENST00000558561 ZP4Q12836 540 aa3.65□□□□□ -1.83
SPG11-211ENST00000558561 VEZF1Q14119 521 aa3.65□□□□□ -1.83
SPG11-211ENST00000558561 KEAP1Q14145 624 aa3.65□□□□□ -1.83
SPG11-211ENST00000558561 PPA1Q15181 289 aa3.65□□□□□ -1.83
SPG11-211ENST00000558561 DEFB113Q30KQ7 82 aa3.65□□□□□ -1.83
SPG11-211ENST00000558561 ALG10Q5BKT4 473 aa3.65□□□□□ -1.83
SPG11-211ENST00000558561 COQ5Q5HYK3 327 aa3.65□□□□□ -1.83
SPG11-211ENST00000558561 TMEM255AQ5JRV8 349 aa3.65□□□□□ -1.83
SPG11-211ENST00000558561 FAM69AQ5T7M9 428 aa3.65□□□□□ -1.83
SPG11-211ENST00000558561 FAM91A1Q658Y4 838 aa3.65□□□□□ -1.83
SPG11-211ENST00000558561 PODNL1Q6PEZ8 512 aa3.65□□□□□ -1.83
SPG11-211ENST00000558561 ZNF613Q6PF04 617 aa3.65□□□□□ -1.83
SPG11-211ENST00000558561 KLHL24Q6TFL4 600 aa3.65□□□□□ -1.83
SPG11-211ENST00000558561 UGT2A3Q6UWM9 527 aa3.65□□□□□ -1.83
SPG11-211ENST00000558561 PAMR1Q6UXH9 720 aa3.65□□□□□ -1.83
SPG11-211ENST00000558561 SLC35D2Q76EJ3 337 aa3.65□□□□□ -1.83
SPG11-211ENST00000558561 TMEM179BQ7Z7N9 219 aa3.65□□□□□ -1.83
SPG11-211ENST00000558561 MDP1Q86V88 176 aa3.65□□□□□ -1.83
SPG11-211ENST00000558561 LRP11Q86VZ4 500 aa3.65□□□□□ -1.83
SPG11-211ENST00000558561 SKA3Q8IX90 412 aa3.65□□□□□ -1.83
SPG11-211ENST00000558561 NRMQ8IXM6 262 aa3.65□□□□□ -1.83
SPG11-211ENST00000558561 C20orf196Q8IYI0 205 aa3.65□□□□□ -1.83
SPG11-211ENST00000558561 DEFB107AQ8IZN7 70 aa3.65□□□□□ -1.83
SPG11-211ENST00000558561 TMEM123Q8N131 208 aa3.65□□□□□ -1.83
SPG11-211ENST00000558561 SYT14Q8NB59 555 aa3.65□□□□□ -1.83
SPG11-211ENST00000558561 PCYOX1LQ8NBM8 494 aa3.65□□□□□ -1.83
SPG11-211ENST00000558561 STEAP2Q8NFT2 490 aa3.65□□□□□ -1.83
SPG11-211ENST00000558561 OR5J2Q8NH18 312 aa3.65□□□□□ -1.83
SPG11-211ENST00000558561 OR52J3Q8NH60 311 aa3.65□□□□□ -1.83
SPG11-211ENST00000558561 MPLKIPQ8TAP9 179 aa3.65□□□□□ -1.83
SPG11-211ENST00000558561 PIGXQ8TBF5 258 aa3.65□□□□□ -1.83
SPG11-211ENST00000558561 DNAJA4Q8WW22 397 aaPredicted RBP3.65□□□□□ -1.83
SPG11-211ENST00000558561 TMEM239Q8WW34 195 aa3.65□□□□□ -1.83
SPG11-211ENST00000558561 ZNRF4Q8WWF5 429 aa3.65□□□□□ -1.83
SPG11-211ENST00000558561 OIT3Q8WWZ8 545 aa3.65□□□□□ -1.83
SPG11-211ENST00000558561 HSD17B8Q92506 261 aa3.65□□□□□ -1.83
SPG11-211ENST00000558561 HDAC2Q92769 488 aaKnown RBP3.65□□□□□ -1.83
SPG11-211ENST00000558561 SLC25A28Q96A46 364 aa3.65□□□□□ -1.83
SPG11-211ENST00000558561 TMEM45BQ96B21 275 aa3.65□□□□□ -1.83
SPG11-211ENST00000558561 NSL1Q96IY1 281 aa3.65□□□□□ -1.83
SPG11-211ENST00000558561 ALKBH3Q96Q83 286 aaPredicted RBP3.65□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 99.7 ms