RNA–Protein interactions for RNA: ENST00000558314.5

TPM1-211, Transcript of tropomyosin 1, humanhuman

TSL 1 (best)

Gene TPM1, Length 1,031 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-211ENST00000558314 PRSS23O95084 383 aa13.13□□□□□ -0.31
TPM1-211ENST00000558314 DBHP09172 617 aa13.13□□□□□ -0.31
TPM1-211ENST00000558314 ZFP36P26651 326 aaKnown RBP13.13□□□□□ -0.31
TPM1-211ENST00000558314 HILS1P60008 231 aa13.13□□□□□ -0.31
TPM1-211ENST00000558314 PSME3P61289 254 aa13.13□□□□□ -0.31
TPM1-211ENST00000558314 AQP6Q13520 282 aa13.13□□□□□ -0.31
TPM1-211ENST00000558314 HLXQ14774 488 aaPredicted RBP13.13□□□□□ -0.31
TPM1-211ENST00000558314 KRT72Q14CN4 511 aa13.13□□□□□ -0.31
TPM1-211ENST00000558314 KLHL36Q8N4N3 616 aa13.13□□□□□ -0.31
TPM1-211ENST00000558314 RNF148Q8N7C7 305 aa13.13□□□□□ -0.31
TPM1-211ENST00000558314 SLC7A13Q8TCU3 470 aa13.13□□□□□ -0.31
TPM1-211ENST00000558314 TBCCD1Q9NVR7 557 aa13.13□□□□□ -0.31
TPM1-211ENST00000558314 ZNF446Q9NWS9 450 aa13.13□□□□□ -0.31
TPM1-211ENST00000558314 ADA2Q9NZK5 511 aa13.13□□□□□ -0.31
TPM1-211ENST00000558314 PPIAL4AQ9Y536 164 aa13.13□□□□□ -0.31
TPM1-211ENST00000558314 ARHGAP32A7KAX9 2087 aa13.12□□□□□ -0.31
TPM1-211ENST00000558314 UNC119BA6NIH7 251 aa13.12□□□□□ -0.31
TPM1-211ENST00000558314 RER1O15258 196 aa13.12□□□□□ -0.31
TPM1-211ENST00000558314 FOXH1O75593 365 aa13.12□□□□□ -0.31
TPM1-211ENST00000558314 ZNF205O95201 554 aa13.12□□□□□ -0.31
TPM1-211ENST00000558314 CD55P08174 381 aa13.12□□□□□ -0.31
TPM1-211ENST00000558314 COX5BP10606 129 aa13.12□□□□□ -0.31
TPM1-211ENST00000558314 TNFRSF1AP19438 455 aa13.12□□□□□ -0.31
TPM1-211ENST00000558314 FPR2P25090 351 aa13.12□□□□□ -0.31
TPM1-211ENST00000558314 DBPQ10586 325 aaPredicted RBP13.12□□□□□ -0.31
TPM1-211ENST00000558314 CDK5R2Q13319 367 aa13.12□□□□□ -0.31
TPM1-211ENST00000558314 MEP1BQ16820 701 aa13.12□□□□□ -0.31
TPM1-211ENST00000558314 ARMCX4Q5H9R4 360 aa13.12□□□□□ -0.31
TPM1-211ENST00000558314 GLYATQ6IB77 296 aa13.12□□□□□ -0.31
TPM1-211ENST00000558314 Q6ZR03 302 aa13.12□□□□□ -0.31
TPM1-211ENST00000558314 FAM122BQ7Z309 247 aa13.12□□□□□ -0.31
TPM1-211ENST00000558314 GLB1L2Q8IW92 636 aa13.12□□□□□ -0.31
TPM1-211ENST00000558314 SPICQ8N5J4 248 aa13.12□□□□□ -0.31
TPM1-211ENST00000558314 OR10AD1Q8NGE0 317 aa13.12□□□□□ -0.31
TPM1-211ENST00000558314 OR1F12Q8NHA8 337 aa13.12□□□□□ -0.31
TPM1-211ENST00000558314 ZFAND2BQ8WV99 257 aa13.12□□□□□ -0.31
TPM1-211ENST00000558314 TSSK2Q96PF2 358 aa13.12□□□□□ -0.31
TPM1-211ENST00000558314 RBM4Q9BWF3 364 aaKnown RBP13.12□□□□□ -0.31
TPM1-211ENST00000558314 PLA2G12AQ9BZM1 189 aa13.12□□□□□ -0.31
TPM1-211ENST00000558314 NUAK2Q9H093 628 aa13.12□□□□□ -0.31
TPM1-211ENST00000558314 FAM107BQ9H098 131 aa13.12□□□□□ -0.31
TPM1-211ENST00000558314 KRCC1Q9NPI7 259 aaPredicted RBP13.12□□□□□ -0.31
TPM1-211ENST00000558314 KLHL21Q9UJP4 597 aa13.12□□□□□ -0.31
TPM1-211ENST00000558314 PPP1R3CQ9UQK1 317 aa13.12□□□□□ -0.31
TPM1-211ENST00000558314 TRBV4-1A0A0J9YWV2 114 aa13.11□□□□□ -0.31
TPM1-211ENST00000558314 SURF4O15260 269 aa13.11□□□□□ -0.31
TPM1-211ENST00000558314 PPP1R3DO95685 299 aa13.11□□□□□ -0.31
TPM1-211ENST00000558314 IGHV2-70P01814 119 aa13.11□□□□□ -0.31
TPM1-211ENST00000558314 ADH4P08319 380 aa13.11□□□□□ -0.31
TPM1-211ENST00000558314 SDHAP31040 664 aa13.11□□□□□ -0.31
TPM1-211ENST00000558314 SEC61A1P61619 476 aaKnown RBP13.11□□□□□ -0.31
TPM1-211ENST00000558314 CCDC92Q53HC0 331 aaPredicted RBP13.11□□□□□ -0.31
TPM1-211ENST00000558314 GPR139Q6DWJ6 353 aa13.11□□□□□ -0.31
TPM1-211ENST00000558314 OR2T2Q6IF00 324 aa13.11□□□□□ -0.31
TPM1-211ENST00000558314 CORO6Q6QEF8 472 aa13.11□□□□□ -0.31
TPM1-211ENST00000558314 RBMS3Q6XE24 437 aaKnown RBP13.11□□□□□ -0.31
TPM1-211ENST00000558314 PTCHD4Q6ZW05 846 aa13.11□□□□□ -0.31
TPM1-211ENST00000558314 TSEN54Q7Z6J9 526 aaKnown RBP13.11□□□□□ -0.31
TPM1-211ENST00000558314 JAZF1Q86VZ6 243 aa13.11□□□□□ -0.31
TPM1-211ENST00000558314 BHLHE23Q8NDY6 225 aa13.11□□□□□ -0.31
TPM1-211ENST00000558314 ZNF420Q8TAQ5 688 aaPredicted RBP13.11□□□□□ -0.31
TPM1-211ENST00000558314 SAMD8Q96LT4 415 aa13.11□□□□□ -0.31
TPM1-211ENST00000558314 ERMAPQ96PL5 475 aaPredicted RBP13.11□□□□□ -0.31
TPM1-211ENST00000558314 DUX5Q96PT3 197 aa13.11□□□□□ -0.31
TPM1-211ENST00000558314 OR2V2Q96R30 315 aa13.11□□□□□ -0.31
TPM1-211ENST00000558314 ELAC2Q9BQ52 826 aaKnown RBP13.11□□□□□ -0.31
TPM1-211ENST00000558314 WACQ9BTA9 647 aa13.11□□□□□ -0.31
TPM1-211ENST00000558314 ANKRD19PQ9H560 264 aa13.11□□□□□ -0.31
TPM1-211ENST00000558314 WDR76Q9H967 626 aa13.11□□□□□ -0.31
TPM1-211ENST00000558314 SRA1Q9HD15 236 aaKnown RBP13.11□□□□□ -0.31
TPM1-211ENST00000558314 MMP26Q9NRE1 261 aa13.11□□□□□ -0.31
TPM1-211ENST00000558314 OPN4Q9UHM6 478 aa13.11□□□□□ -0.31
TPM1-211ENST00000558314 SIGLEC7Q9Y286 467 aa13.11□□□□□ -0.31
TPM1-211ENST00000558314 ANK2Q01484 3957 aa13.1□□□□□ -0.31
TPM1-211ENST00000558314 IGHV3OR16-10A0A075B7F0 116 aa13.1□□□□□ -0.31
TPM1-211ENST00000558314 NDUFAB1O14561 156 aa13.1□□□□□ -0.31
TPM1-211ENST00000558314 ICMTO60725 284 aa13.1□□□□□ -0.31
TPM1-211ENST00000558314 PTP4A3O75365 173 aa13.1□□□□□ -0.31
TPM1-211ENST00000558314 KITLGP21583 273 aa13.1□□□□□ -0.31
TPM1-211ENST00000558314 GATA3P23771 443 aa13.1□□□□□ -0.31
TPM1-211ENST00000558314 MDH1P40925 334 aaKnown RBP13.1□□□□□ -0.31
TPM1-211ENST00000558314 CDKN2AP42771 156 aaKnown RBP13.1□□□□□ -0.31
TPM1-211ENST00000558314 RPS6KA3P51812 740 aa13.1□□□□□ -0.31
TPM1-211ENST00000558314 PRSS12P56730 875 aa13.1□□□□□ -0.31
TPM1-211ENST00000558314 BTG1P62324 171 aa13.1□□□□□ -0.31
TPM1-211ENST00000558314 SPIBQ01892 262 aa13.1□□□□□ -0.31
TPM1-211ENST00000558314 ZMYND11Q15326 602 aa13.1□□□□□ -0.31
TPM1-211ENST00000558314 SEC23BQ15437 767 aa13.1□□□□□ -0.31
TPM1-211ENST00000558314 LEG1Q6P5S2 330 aa13.1□□□□□ -0.31
TPM1-211ENST00000558314 FAM86B1Q8N7N1 296 aa13.1□□□□□ -0.31
TPM1-211ENST00000558314 FAM156AQ8NDB6 213 aa13.1□□□□□ -0.31
TPM1-211ENST00000558314 FANK1Q8TC84 345 aa13.1□□□□□ -0.31
TPM1-211ENST00000558314 FAM216AQ8WUB2 273 aa13.1□□□□□ -0.31
TPM1-211ENST00000558314 PTP4A1Q93096 173 aa13.1□□□□□ -0.31
TPM1-211ENST00000558314 HAVCR1Q96D42 359 aa13.1□□□□□ -0.31
TPM1-211ENST00000558314 COG8Q96MW5 612 aa13.1□□□□□ -0.31
TPM1-211ENST00000558314 CCDC134Q9H6E4 229 aa13.1□□□□□ -0.31
TPM1-211ENST00000558314 PATZ1Q9HBE1 687 aaKnown RBP13.1□□□□□ -0.31
TPM1-211ENST00000558314 NRIP3Q9NQ35 241 aa13.1□□□□□ -0.31
TPM1-211ENST00000558314 DDX28Q9NUL7 540 aaKnown RBP13.1□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 54.5 ms