RNA–Protein interactions for RNA: ENST00000557945.5

CASC4-204, Transcript of cancer susceptibility 4, humanhuman

TSL 1 (best)

Gene CASC4, Length 1,386 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-204ENST00000557945 SPATC1Q76KD6 591 aa18.44■□□□□ 0.54
CASC4-204ENST00000557945 THAP5Q7Z6K1 395 aa18.44■□□□□ 0.54
CASC4-204ENST00000557945 ZNF454Q8N9F8 522 aa18.44■□□□□ 0.54
CASC4-204ENST00000557945 OR1J2Q8NGS2 313 aa18.44■□□□□ 0.54
CASC4-204ENST00000557945 OR1F12Q8NHA8 337 aa18.44■□□□□ 0.54
CASC4-204ENST00000557945 THEM6Q8WUY1 208 aa18.44■□□□□ 0.54
CASC4-204ENST00000557945 ZNF184Q99676 751 aaPredicted RBP18.44■□□□□ 0.54
CASC4-204ENST00000557945 HDHD2Q9H0R4 259 aa18.44■□□□□ 0.54
CASC4-204ENST00000557945 CDH20Q9HBT6 801 aa18.44■□□□□ 0.54
CASC4-204ENST00000557945 AMBNQ9NP70 447 aa18.44■□□□□ 0.54
CASC4-204ENST00000557945 CENPMQ9NSP4 180 aa18.44■□□□□ 0.54
CASC4-204ENST00000557945 LAMP5Q9UJQ1 280 aa18.44■□□□□ 0.54
CASC4-204ENST00000557945 IGHV2OR16-5A0A0B4J2B6 119 aa18.43■□□□□ 0.54
CASC4-204ENST00000557945 C5orf49A4QMS7 147 aa18.43■□□□□ 0.54
CASC4-204ENST00000557945 ATP6V1G2-DDX39BF2Z307 99 aa18.43■□□□□ 0.54
CASC4-204ENST00000557945 SYNGR3O43761 229 aa18.43■□□□□ 0.54
CASC4-204ENST00000557945 CTAG2O75638 210 aa18.43■□□□□ 0.54
CASC4-204ENST00000557945 SBK2P0C263 348 aa18.43■□□□□ 0.54
CASC4-204ENST00000557945 CALCRP30988 508 aa18.43■□□□□ 0.54
CASC4-204ENST00000557945 ZNF91Q05481 1191 aa18.43■□□□□ 0.54
CASC4-204ENST00000557945 POU4F2Q12837 409 aa18.43■□□□□ 0.54
CASC4-204ENST00000557945 CDK5R2Q13319 367 aa18.43■□□□□ 0.54
CASC4-204ENST00000557945 SMN1Q16637 294 aaKnown RBP18.43■□□□□ 0.54
CASC4-204ENST00000557945 TMEM200AQ86VY9 491 aa18.43■□□□□ 0.54
CASC4-204ENST00000557945 CDC20BQ86Y33 519 aa18.43■□□□□ 0.54
CASC4-204ENST00000557945 SLC35F2Q8IXU6 374 aa18.43■□□□□ 0.54
CASC4-204ENST00000557945 OTOSQ8NHW6 89 aa18.43■□□□□ 0.54
CASC4-204ENST00000557945 ABHD6Q9BV23 337 aa18.43■□□□□ 0.54
CASC4-204ENST00000557945 POU2F3Q9UKI9 436 aa18.43■□□□□ 0.54
CASC4-204ENST00000557945 CADP27708 2225 aa18.43■□□□□ 0.54
CASC4-204ENST00000557945 LOC100509620A0A075B734 347 aa18.42■□□□□ 0.54
CASC4-204ENST00000557945 OR6C6A6NF89 314 aa18.42■□□□□ 0.54
CASC4-204ENST00000557945 PLAUP00749 431 aa18.42■□□□□ 0.54
CASC4-204ENST00000557945 LYNP07948 512 aa18.42■□□□□ 0.54
CASC4-204ENST00000557945 COX5BP10606 129 aa18.42■□□□□ 0.54
CASC4-204ENST00000557945 DBTP11182 482 aaKnown RBP18.42■□□□□ 0.54
CASC4-204ENST00000557945 TAF13Q15543 124 aa18.42■□□□□ 0.54
CASC4-204ENST00000557945 ZNF704Q6ZNC4 412 aaPredicted RBP18.42■□□□□ 0.54
CASC4-204ENST00000557945 KBTBD8Q8NFY9 601 aa18.42■□□□□ 0.54
CASC4-204ENST00000557945 OR4F15Q8NGB8 312 aa18.42■□□□□ 0.54
CASC4-204ENST00000557945 ST7LQ8TDW4 575 aa18.42■□□□□ 0.54
CASC4-204ENST00000557945 SLC7A6Q92536 515 aa18.42■□□□□ 0.54
CASC4-204ENST00000557945 SLAMF6Q96DU3 332 aa18.42■□□□□ 0.54
CASC4-204ENST00000557945 C14orf79Q96F83 325 aa18.42■□□□□ 0.54
CASC4-204ENST00000557945 POM121L2Q96KW2 1035 aa18.42■□□□□ 0.54
CASC4-204ENST00000557945 COQ7Q99807 217 aa18.42■□□□□ 0.54
CASC4-204ENST00000557945 ATF6BQ99941 703 aa18.42■□□□□ 0.54
CASC4-204ENST00000557945 PNRC2Q9NPJ4 139 aaKnown RBP18.42■□□□□ 0.54
CASC4-204ENST00000557945 RAB26Q9ULW5 256 aa18.42■□□□□ 0.54
CASC4-204ENST00000557945 KLHDC2Q9Y2U9 406 aa18.42■□□□□ 0.54
CASC4-204ENST00000557945 RPL36Q9Y3U8 105 aaKnown RBP18.42■□□□□ 0.54
CASC4-204ENST00000557945 ATP23Q9Y6H3 246 aa18.42■□□□□ 0.54
CASC4-204ENST00000557945 ABCA4P78363 2273 aa18.42■□□□□ 0.54
CASC4-204ENST00000557945 SSTR2P30874 369 aa18.42■□□□□ 0.54
CASC4-204ENST00000557945 GALK2Q01415 458 aa18.42■□□□□ 0.54
CASC4-204ENST00000557945 ECH1Q13011 328 aa18.42■□□□□ 0.54
CASC4-204ENST00000557945 PAQR4Q8N4S7 273 aaPredicted RBP18.42■□□□□ 0.54
CASC4-204ENST00000557945 OR10H4Q8NGA5 316 aa18.42■□□□□ 0.54
CASC4-204ENST00000557945 OR10S1Q8NGN2 331 aa18.42■□□□□ 0.54
CASC4-204ENST00000557945 AMELYQ99218 206 aa18.42■□□□□ 0.54
CASC4-204ENST00000557945 TBX5Q99593 518 aa18.42■□□□□ 0.54
CASC4-204ENST00000557945 TMEM204Q9BSN7 226 aa18.42■□□□□ 0.54
CASC4-204ENST00000557945 COPS4Q9BT78 406 aa18.42■□□□□ 0.54
CASC4-204ENST00000557945 ANKRD60Q9BZ19 345 aa18.42■□□□□ 0.54
CASC4-204ENST00000557945 CLEC4MQ9H2X3 399 aaPredicted RBP18.42■□□□□ 0.54
CASC4-204ENST00000557945 HEATR1Q9H583 2144 aaKnown RBP18.42■□□□□ 0.54
CASC4-204ENST00000557945 TMEM14AQ9Y6G1 99 aa18.42■□□□□ 0.54
CASC4-204ENST00000557945 HECTD1Q9ULT8 2610 aa18.41■□□□□ 0.54
CASC4-204ENST00000557945 FAM221AA4D161 298 aa18.41■□□□□ 0.54
CASC4-204ENST00000557945 ZNF670-ZNF695F2Z2N8 137 aa18.41■□□□□ 0.54
CASC4-204ENST00000557945 DBHP09172 617 aa18.41■□□□□ 0.54
CASC4-204ENST00000557945 ZNF35P13682 527 aa18.41■□□□□ 0.54
CASC4-204ENST00000557945 ALOX5APP20292 161 aa18.41■□□□□ 0.54
CASC4-204ENST00000557945 MYF6P23409 242 aa18.41■□□□□ 0.54
CASC4-204ENST00000557945 CNBD2Q96M20 576 aa18.41■□□□□ 0.54
CASC4-204ENST00000557945 MNTQ99583 582 aa18.41■□□□□ 0.54
CASC4-204ENST00000557945 TTTY10Q9BZA0 68 aa18.41■□□□□ 0.54
CASC4-204ENST00000557945 Q9H521 79 aa18.41■□□□□ 0.54
CASC4-204ENST00000557945 ATPIF1Q9UII2 106 aa18.41■□□□□ 0.54
CASC4-204ENST00000557945 COPS3Q9UNS2 423 aa18.41■□□□□ 0.54
CASC4-204ENST00000557945 BAHCC1Q9P281 2608 aa18.4■□□□□ 0.54
CASC4-204ENST00000557945 SHISA9B4DS77 424 aa18.4■□□□□ 0.54
CASC4-204ENST00000557945 ZNF878C9JN71 531 aa18.4■□□□□ 0.54
CASC4-204ENST00000557945 KRT80Q6KB66 452 aa18.4■□□□□ 0.54
CASC4-204ENST00000557945 FBLIM1Q8WUP2 373 aa18.4■□□□□ 0.54
CASC4-204ENST00000557945 RNF133Q8WVZ7 376 aa18.4■□□□□ 0.54
CASC4-204ENST00000557945 NEUROG1Q92886 237 aa18.4■□□□□ 0.54
CASC4-204ENST00000557945 LGALS12Q96DT0 336 aa18.4■□□□□ 0.54
CASC4-204ENST00000557945 OR51B6Q9H340 312 aa18.4■□□□□ 0.54
CASC4-204ENST00000557945 EIF3KQ9UBQ5 218 aaKnown RBP18.4■□□□□ 0.54
CASC4-204ENST00000557945 GRIP1Q9Y3R0 1128 aa18.4■□□□□ 0.54
CASC4-204ENST00000557945 SPEF1Q9Y4P9 236 aa18.4■□□□□ 0.54
CASC4-204ENST00000557945 RTTNQ86VV8 2226 aa18.39■□□□□ 0.53
CASC4-204ENST00000557945 F5H5K5 113 aa18.39■□□□□ 0.53
CASC4-204ENST00000557945 H2BFMP0C1H6 154 aa18.39■□□□□ 0.53
CASC4-204ENST00000557945 OR2T7P0C7T2 308 aa18.39■□□□□ 0.53
CASC4-204ENST00000557945 SLC15A1P46059 708 aa18.39■□□□□ 0.53
CASC4-204ENST00000557945 CXCR4P61073 352 aa18.39■□□□□ 0.53
CASC4-204ENST00000557945 HGFACQ04756 655 aa18.39■□□□□ 0.53
CASC4-204ENST00000557945 HIST2H2ABQ8IUE6 130 aaPredicted RBP18.39■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms