RNA–Protein interactions for RNA: ENST00000557538.5

HIF1A-212, Transcript of hypoxia inducible factor 1 subunit alpha, humanhuman

TSL 1 (best) BASIC

Gene HIF1A, Length 3,468 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF1A-212ENST00000557538 DCDP81605 110 aaKnown RBP1.33□□□□□ -2.2
HIF1A-212ENST00000557538 IL5RAQ01344 420 aa1.33□□□□□ -2.2
HIF1A-212ENST00000557538 BNIP2Q12982 314 aa1.33□□□□□ -2.2
HIF1A-212ENST00000557538 ECH1Q13011 328 aa1.33□□□□□ -2.2
HIF1A-212ENST00000557538 KCNJ11Q14654 390 aa1.33□□□□□ -2.2
HIF1A-212ENST00000557538 SNAI3Q3KNW1 292 aa1.33□□□□□ -2.2
HIF1A-212ENST00000557538 SBK1Q52WX2 424 aa1.33□□□□□ -2.2
HIF1A-212ENST00000557538 TIMM23BQ5SRD1 257 aa1.33□□□□□ -2.2
HIF1A-212ENST00000557538 C9orf64Q5T6V5 341 aa1.33□□□□□ -2.2
HIF1A-212ENST00000557538 N4BP2L1Q5TBK1 243 aaPredicted RBP1.33□□□□□ -2.2
HIF1A-212ENST00000557538 ZNF691Q5VV52 312 aa1.33□□□□□ -2.2
HIF1A-212ENST00000557538 PLCXD3Q63HM9 321 aa1.33□□□□□ -2.2
HIF1A-212ENST00000557538 REP15Q6BDI9 236 aa1.33□□□□□ -2.2
HIF1A-212ENST00000557538 RTL6Q6ICC9 239 aa1.33□□□□□ -2.2
HIF1A-212ENST00000557538 RPL13AP3Q6NVV1 102 aa1.33□□□□□ -2.2
HIF1A-212ENST00000557538 H3F3CQ6NXT2 135 aa1.33□□□□□ -2.2
HIF1A-212ENST00000557538 FAHD2BQ6P2I3 314 aaPredicted RBP1.33□□□□□ -2.2
HIF1A-212ENST00000557538 ULK3Q6PHR2 472 aa1.33□□□□□ -2.2
HIF1A-212ENST00000557538 SPNS3Q6ZMD2 512 aa1.33□□□□□ -2.2
HIF1A-212ENST00000557538 ZNF730Q6ZMV8 503 aa1.33□□□□□ -2.2
HIF1A-212ENST00000557538 WDR88Q6ZMY6 472 aa1.33□□□□□ -2.2
HIF1A-212ENST00000557538 C16orf62Q7Z3J2 963 aa1.33□□□□□ -2.2
HIF1A-212ENST00000557538 CEACAM19Q7Z692 300 aa1.33□□□□□ -2.2
HIF1A-212ENST00000557538 MRPL52Q86TS9 123 aaKnown RBP1.33□□□□□ -2.2
HIF1A-212ENST00000557538 TRIM69Q86WT6 500 aa1.33□□□□□ -2.2
HIF1A-212ENST00000557538 CBWD2Q8IUF1 395 aa1.33□□□□□ -2.2
HIF1A-212ENST00000557538 ZNF100Q8IYN0 542 aa1.33□□□□□ -2.2
HIF1A-212ENST00000557538 MICU2Q8IYU8 434 aa1.33□□□□□ -2.2
HIF1A-212ENST00000557538 HS3ST5Q8IZT8 346 aa1.33□□□□□ -2.2
HIF1A-212ENST00000557538 SAMD12Q8N8I0 201 aa1.33□□□□□ -2.2
HIF1A-212ENST00000557538 SREK1IP1Q8N9Q2 155 aaPredicted RBP1.33□□□□□ -2.2
HIF1A-212ENST00000557538 GRPEL2Q8TAA5 225 aa1.33□□□□□ -2.2
HIF1A-212ENST00000557538 TFB1MQ8WVM0 346 aaKnown RBP1.33□□□□□ -2.2
HIF1A-212ENST00000557538 ACOT12Q8WYK0 555 aa1.33□□□□□ -2.2
HIF1A-212ENST00000557538 CDS1Q92903 461 aa1.33□□□□□ -2.2
HIF1A-212ENST00000557538 MRPL24Q96A35 216 aaKnown RBP1.33□□□□□ -2.2
HIF1A-212ENST00000557538 FAHD2AQ96GK7 314 aa1.33□□□□□ -2.2
HIF1A-212ENST00000557538 HOPXQ9BPY8 73 aaPredicted RBP1.33□□□□□ -2.2
HIF1A-212ENST00000557538 CHRNA10Q9GZZ6 450 aa1.33□□□□□ -2.2
HIF1A-212ENST00000557538 PLEKHA3Q9HB20 300 aa1.33□□□□□ -2.2
HIF1A-212ENST00000557538 SMOXQ9NWM0 555 aa1.33□□□□□ -2.2
HIF1A-212ENST00000557538 B3GNT2Q9NY97 397 aa1.33□□□□□ -2.2
HIF1A-212ENST00000557538 RDH8Q9NYR8 311 aa1.33□□□□□ -2.2
HIF1A-212ENST00000557538 TAS2R1Q9NYW7 299 aa1.33□□□□□ -2.2
HIF1A-212ENST00000557538 EHFQ9NZC4 300 aa1.33□□□□□ -2.2
HIF1A-212ENST00000557538 GLTPQ9NZD2 209 aa1.33□□□□□ -2.2
HIF1A-212ENST00000557538 MTCH1Q9NZJ7 389 aa1.33□□□□□ -2.2
HIF1A-212ENST00000557538 MAT2BQ9NZL9 334 aa1.33□□□□□ -2.2
HIF1A-212ENST00000557538 KLRF1Q9NZS2 232 aa1.33□□□□□ -2.2
HIF1A-212ENST00000557538 DHCR7Q9UBM7 475 aaKnown RBP1.33□□□□□ -2.2
HIF1A-212ENST00000557538 ZNF639Q9UID6 485 aa1.33□□□□□ -2.2
HIF1A-212ENST00000557538 PHF11Q9UIL8 331 aa1.33□□□□□ -2.2
HIF1A-212ENST00000557538 SLC6A5Q9Y345 797 aa1.33□□□□□ -2.2
HIF1A-212ENST00000557538 MYH6P13533 1939 aa1.33□□□□□ -2.2
HIF1A-212ENST00000557538 IFT172Q9UG01 1749 aa1.33□□□□□ -2.2
HIF1A-212ENST00000557538 EFCAB6Q5THR3 1501 aa1.33□□□□□ -2.2
HIF1A-212ENST00000557538 OVOS2A0A0G2JMS6 1433 aa1.33□□□□□ -2.2
HIF1A-212ENST00000557538 OVOS2A0A0J9YW53 1432 aa1.33□□□□□ -2.2
HIF1A-212ENST00000557538 OVOS2Q6IE36 1432 aa1.33□□□□□ -2.2
HIF1A-212ENST00000557538 NEO1Q92859 1461 aa1.33□□□□□ -2.2
HIF1A-212ENST00000557538 MAGI3Q5TCQ9 1506 aa1.33□□□□□ -2.2
HIF1A-212ENST00000557538 IGKV3D-15A0A087WSY6 115 aa1.33□□□□□ -2.2
HIF1A-212ENST00000557538 TRGV8A0A0C4DH27 118 aa1.33□□□□□ -2.2
HIF1A-212ENST00000557538 GMNCA6NCL1 334 aa1.33□□□□□ -2.2
HIF1A-212ENST00000557538 H7C417 338 aa1.33□□□□□ -2.2
HIF1A-212ENST00000557538 M0QYV0 167 aa1.33□□□□□ -2.2
HIF1A-212ENST00000557538 SIVA1O15304 175 aa1.33□□□□□ -2.2
HIF1A-212ENST00000557538 SNAI2O43623 268 aa1.33□□□□□ -2.2
HIF1A-212ENST00000557538 DUX1O43812 170 aa1.33□□□□□ -2.2
HIF1A-212ENST00000557538 SLC22A5O76082 557 aa1.33□□□□□ -2.2
HIF1A-212ENST00000557538 HPP00738 406 aa1.33□□□□□ -2.2
HIF1A-212ENST00000557538 IGHV2-5P01817 119 aa1.33□□□□□ -2.2
HIF1A-212ENST00000557538 MT-ND1P03886 318 aa1.33□□□□□ -2.2
HIF1A-212ENST00000557538 S100A8P05109 93 aa1.33□□□□□ -2.2
HIF1A-212ENST00000557538 CYBAP13498 195 aa1.33□□□□□ -2.2
HIF1A-212ENST00000557538 TSPAN8P19075 237 aa1.33□□□□□ -2.2
HIF1A-212ENST00000557538 PCMT1P22061 227 aa1.33□□□□□ -2.2
HIF1A-212ENST00000557538 GABRR1P24046 479 aa1.33□□□□□ -2.2
HIF1A-212ENST00000557538 PMELP40967 661 aa1.33□□□□□ -2.2
HIF1A-212ENST00000557538 EFNA3P52797 238 aa1.33□□□□□ -2.2
HIF1A-212ENST00000557538 CRYBA4P53673 196 aa1.33□□□□□ -2.2
HIF1A-212ENST00000557538 PLA2G16P53816 162 aa1.33□□□□□ -2.2
HIF1A-212ENST00000557538 RPS4XP62701 263 aaKnown RBP1.33□□□□□ -2.2
HIF1A-212ENST00000557538 MRPS6P82932 125 aaKnown RBP1.33□□□□□ -2.2
HIF1A-212ENST00000557538 STX3Q13277 289 aa1.33□□□□□ -2.2
HIF1A-212ENST00000557538 EMC2Q15006 297 aa1.33□□□□□ -2.2
HIF1A-212ENST00000557538 LRRC36Q1X8D7 754 aa1.33□□□□□ -2.2
HIF1A-212ENST00000557538 SLC36A2Q495M3 483 aa1.33□□□□□ -2.2
HIF1A-212ENST00000557538 HIGD2BQ4VC39 106 aa1.33□□□□□ -2.2
HIF1A-212ENST00000557538 C14orf177Q52M58 125 aa1.33□□□□□ -2.2
HIF1A-212ENST00000557538 KLHL12Q53G59 568 aa1.33□□□□□ -2.2
HIF1A-212ENST00000557538 C5orf47Q569G3 176 aa1.33□□□□□ -2.2
HIF1A-212ENST00000557538 ZNF774Q6NX45 483 aa1.33□□□□□ -2.2
HIF1A-212ENST00000557538 UGT2A3Q6UWM9 527 aa1.33□□□□□ -2.2
HIF1A-212ENST00000557538 LRRN1Q6UXK5 716 aa1.33□□□□□ -2.2
HIF1A-212ENST00000557538 LINC00299Q6ZSB3 139 aa1.33□□□□□ -2.2
HIF1A-212ENST00000557538 ANKRD37Q7Z713 158 aa1.33□□□□□ -2.2
HIF1A-212ENST00000557538 GTSCR1Q86UQ5 136 aa1.33□□□□□ -2.2
HIF1A-212ENST00000557538 PLCZ1Q86YW0 608 aa1.33□□□□□ -2.2
HIF1A-212ENST00000557538 UBALD2Q8IYN6 164 aa1.33□□□□□ -2.2
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms