RNA–Protein interactions for RNA: ENST00000557529.1

SHMT2-233, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 1,369 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-233ENST00000557529 ISG15P05161 165 aa11.01□□□□□ -0.65
SHMT2-233ENST00000557529 YES1P07947 543 aa11.01□□□□□ -0.65
SHMT2-233ENST00000557529 CST2P09228 141 aa11.01□□□□□ -0.65
SHMT2-233ENST00000557529 UBCP0CG48 685 aaKnown RBP11.01□□□□□ -0.65
SHMT2-233ENST00000557529 ACHEP22303 614 aa11.01□□□□□ -0.65
SHMT2-233ENST00000557529 HSD11B1P28845 292 aa11.01□□□□□ -0.65
SHMT2-233ENST00000557529 PSMA6P60900 246 aaKnown RBP11.01□□□□□ -0.65
SHMT2-233ENST00000557529 HIST1H3AP68431 136 aa11.01□□□□□ -0.65
SHMT2-233ENST00000557529 ENDOGQ14249 297 aaKnown RBP11.01□□□□□ -0.65
SHMT2-233ENST00000557529 HIST2H3PS2Q5TEC6 136 aa11.01□□□□□ -0.65
SHMT2-233ENST00000557529 TMEM244Q5VVB8 128 aa11.01□□□□□ -0.65
SHMT2-233ENST00000557529 SFXN4Q6P4A7 337 aa11.01□□□□□ -0.65
SHMT2-233ENST00000557529 HIST2H3AQ71DI3 136 aa11.01□□□□□ -0.65
SHMT2-233ENST00000557529 SPACA3Q8IXA5 215 aa11.01□□□□□ -0.65
SHMT2-233ENST00000557529 TSEN15Q8WW01 171 aaKnown RBP11.01□□□□□ -0.65
SHMT2-233ENST00000557529 WACQ9BTA9 647 aa11.01□□□□□ -0.65
SHMT2-233ENST00000557529 PRDM14Q9GZV8 571 aa11.01□□□□□ -0.65
SHMT2-233ENST00000557529 GPR35Q9HC97 309 aa11.01□□□□□ -0.65
SHMT2-233ENST00000557529 TCF7L1Q9HCS4 588 aa11.01□□□□□ -0.65
SHMT2-233ENST00000557529 ABCB9Q9NP78 766 aa11.01□□□□□ -0.65
SHMT2-233ENST00000557529 ADAM30Q9UKF2 790 aa11.01□□□□□ -0.65
SHMT2-233ENST00000557529 WDFY3Q8IZQ1 3526 aa11□□□□□ -0.65
SHMT2-233ENST00000557529 A0A0G2JK05 382 aa11□□□□□ -0.65
SHMT2-233ENST00000557529 SLC22A20A6NK97 555 aa11□□□□□ -0.65
SHMT2-233ENST00000557529 RER1O15258 196 aa11□□□□□ -0.65
SHMT2-233ENST00000557529 RRP8O43159 456 aaKnown RBP11□□□□□ -0.65
SHMT2-233ENST00000557529 SLC19A2O60779 497 aa11□□□□□ -0.65
SHMT2-233ENST00000557529 APOC1P02654 83 aa11□□□□□ -0.65
SHMT2-233ENST00000557529 CD2P06729 351 aa11□□□□□ -0.65
SHMT2-233ENST00000557529 CTSSP25774 331 aa11□□□□□ -0.65
SHMT2-233ENST00000557529 EIF2S3P41091 472 aaKnown RBP11□□□□□ -0.65
SHMT2-233ENST00000557529 SOX2P48431 317 aa11□□□□□ -0.65
SHMT2-233ENST00000557529 C3AR1Q16581 482 aa11□□□□□ -0.65
SHMT2-233ENST00000557529 CEACAM16Q2WEN9 425 aa11□□□□□ -0.65
SHMT2-233ENST00000557529 NRN1LQ496H8 165 aa11□□□□□ -0.65
SHMT2-233ENST00000557529 IDNKQ5T6J7 187 aa11□□□□□ -0.65
SHMT2-233ENST00000557529 Q6ZS92 163 aa11□□□□□ -0.65
SHMT2-233ENST00000557529 NR2C2APQ86WQ0 139 aa11□□□□□ -0.65
SHMT2-233ENST00000557529 LAX1Q8IWV1 398 aa11□□□□□ -0.65
SHMT2-233ENST00000557529 TUSC5Q8IXB3 177 aa11□□□□□ -0.65
SHMT2-233ENST00000557529 ELMOD2Q8IZ81 293 aa11□□□□□ -0.65
SHMT2-233ENST00000557529 RDH10Q8IZV5 341 aa11□□□□□ -0.65
SHMT2-233ENST00000557529 PARP16Q8N5Y8 322 aa11□□□□□ -0.65
SHMT2-233ENST00000557529 SARAFQ96BY9 339 aa11□□□□□ -0.65
SHMT2-233ENST00000557529 ALKBH3Q96Q83 286 aaPredicted RBP11□□□□□ -0.65
SHMT2-233ENST00000557529 FOXB1Q99853 325 aa11□□□□□ -0.65
SHMT2-233ENST00000557529 ZCCHC4Q9H5U6 513 aa11□□□□□ -0.65
SHMT2-233ENST00000557529 PNRC2Q9NPJ4 139 aaKnown RBP11□□□□□ -0.65
SHMT2-233ENST00000557529 G6PC2Q9NQR9 355 aa11□□□□□ -0.65
SHMT2-233ENST00000557529 DDX28Q9NUL7 540 aaKnown RBP11□□□□□ -0.65
SHMT2-233ENST00000557529 FAM206AQ9NX38 181 aa11□□□□□ -0.65
SHMT2-233ENST00000557529 COMMD3Q9UBI1 195 aa11□□□□□ -0.65
SHMT2-233ENST00000557529 HHLA2Q9UM44 414 aa11□□□□□ -0.65
SHMT2-233ENST00000557529 DHDHQ9UQ10 334 aa11□□□□□ -0.65
SHMT2-233ENST00000557529 A0A087WV48 116 aa10.99□□□□□ -0.65
SHMT2-233ENST00000557529 RPL36A-HNRNPH2H7BZ11 118 aa10.99□□□□□ -0.65
SHMT2-233ENST00000557529 APEX1P27695 318 aaKnown RBP10.99□□□□□ -0.65
SHMT2-233ENST00000557529 PSMD7P51665 324 aa10.99□□□□□ -0.65
SHMT2-233ENST00000557529 OR10A3P58181 314 aa10.99□□□□□ -0.65
SHMT2-233ENST00000557529 PCBD1P61457 104 aa10.99□□□□□ -0.65
SHMT2-233ENST00000557529 SCRN3Q0VDG4 424 aa10.99□□□□□ -0.65
SHMT2-233ENST00000557529 ECH1Q13011 328 aa10.99□□□□□ -0.65
SHMT2-233ENST00000557529 ODF4Q2M2E3 257 aa10.99□□□□□ -0.65
SHMT2-233ENST00000557529 CEP78Q5JTW2 689 aa10.99□□□□□ -0.65
SHMT2-233ENST00000557529 RPUSD3Q6P087 351 aaKnown RBP10.99□□□□□ -0.65
SHMT2-233ENST00000557529 SYT9Q86SS6 491 aa10.99□□□□□ -0.65
SHMT2-233ENST00000557529 SIAH3Q8IW03 269 aa10.99□□□□□ -0.65
SHMT2-233ENST00000557529 HTRA1Q92743 480 aa10.99□□□□□ -0.65
SHMT2-233ENST00000557529 TMEM106AQ96A25 262 aa10.99□□□□□ -0.65
SHMT2-233ENST00000557529 APH1AQ96BI3 265 aa10.99□□□□□ -0.65
SHMT2-233ENST00000557529 ZNF837Q96EG3 531 aaPredicted RBP10.99□□□□□ -0.65
SHMT2-233ENST00000557529 KCNJ15Q99712 375 aa10.99□□□□□ -0.65
SHMT2-233ENST00000557529 PBOV1Q9GZY1 135 aa10.99□□□□□ -0.65
SHMT2-233ENST00000557529 MIXL1Q9H2W2 232 aa10.99□□□□□ -0.65
SHMT2-233ENST00000557529 CALHM2Q9HA72 323 aa10.99□□□□□ -0.65
SHMT2-233ENST00000557529 GLRX2Q9NS18 164 aa10.99□□□□□ -0.65
SHMT2-233ENST00000557529 ABRACLQ9P1F3 81 aa10.99□□□□□ -0.65
SHMT2-233ENST00000557529 NUFIP1Q9UHK0 495 aaKnown RBP10.99□□□□□ -0.65
SHMT2-233ENST00000557529 DAPK2Q9UIK4 370 aa10.99□□□□□ -0.65
SHMT2-233ENST00000557529 LOC107986453A0A1B0GWG9 222 aa10.98□□□□□ -0.65
SHMT2-233ENST00000557529 ZNF587BE7ETH6 402 aa10.98□□□□□ -0.65
SHMT2-233ENST00000557529 FARS2O95363 451 aaKnown RBP10.98□□□□□ -0.65
SHMT2-233ENST00000557529 EPXP11678 715 aa10.98□□□□□ -0.65
SHMT2-233ENST00000557529 RAB35Q15286 201 aa10.98□□□□□ -0.65
SHMT2-233ENST00000557529 ELFN2Q5R3F8 820 aa10.98□□□□□ -0.65
SHMT2-233ENST00000557529 TSPO2Q5TGU0 170 aa10.98□□□□□ -0.65
SHMT2-233ENST00000557529 METAP1DQ6UB28 335 aaPredicted RBP10.98□□□□□ -0.65
SHMT2-233ENST00000557529 STAC2Q6ZMT1 411 aa10.98□□□□□ -0.65
SHMT2-233ENST00000557529 LINGO2Q7L985 606 aa10.98□□□□□ -0.65
SHMT2-233ENST00000557529 ABHD12BQ7Z5M8 362 aaPredicted RBP10.98□□□□□ -0.65
SHMT2-233ENST00000557529 BTLAQ7Z6A9 289 aa10.98□□□□□ -0.65
SHMT2-233ENST00000557529 ZNF100Q8IYN0 542 aa10.98□□□□□ -0.65
SHMT2-233ENST00000557529 LRRC18Q8N456 261 aa10.98□□□□□ -0.65
SHMT2-233ENST00000557529 SLC22A24Q8N4F4 322 aa10.98□□□□□ -0.65
SHMT2-233ENST00000557529 ZNF283Q8N7M2 679 aa10.98□□□□□ -0.65
SHMT2-233ENST00000557529 OR51A4Q8NGJ6 313 aa10.98□□□□□ -0.65
SHMT2-233ENST00000557529 OR10AC1Q8NH08 325 aa10.98□□□□□ -0.65
SHMT2-233ENST00000557529 DIRAS2Q96HU8 199 aa10.98□□□□□ -0.65
SHMT2-233ENST00000557529 MRI1Q9BV20 369 aa10.98□□□□□ -0.65
SHMT2-233ENST00000557529 HDHD2Q9H0R4 259 aa10.98□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms