RNA–Protein interactions for RNA: ENST00000557431.5

SLIRP-210, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 2 BASIC

Gene SLIRP, Length 725 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-210ENST00000557431 CYBRD1Q53TN4 286 aa11.79□□□□□ -0.52
SLIRP-210ENST00000557431 RUSC1-AS1Q66K80 236 aa11.79□□□□□ -0.52
SLIRP-210ENST00000557431 OR2T2Q6IF00 324 aa11.79□□□□□ -0.52
SLIRP-210ENST00000557431 VASH1Q7L8A9 365 aaPredicted RBP11.79□□□□□ -0.52
SLIRP-210ENST00000557431 KIR3DL3Q8N743 410 aa11.79□□□□□ -0.52
SLIRP-210ENST00000557431 POU5F2Q8N7G0 328 aa11.79□□□□□ -0.52
SLIRP-210ENST00000557431 ATG16L2Q8NAA4 619 aa11.79□□□□□ -0.52
SLIRP-210ENST00000557431 STON2Q8WXE9 905 aa11.79□□□□□ -0.52
SLIRP-210ENST00000557431 TMIGD2Q96BF3 282 aa11.79□□□□□ -0.52
SLIRP-210ENST00000557431 Q96M85 177 aa11.79□□□□□ -0.52
SLIRP-210ENST00000557431 SSBP3Q9BWW4 388 aaPredicted RBP11.79□□□□□ -0.52
SLIRP-210ENST00000557431 RABEP2Q9H5N1 569 aa11.79□□□□□ -0.52
SLIRP-210ENST00000557431 MARCH7Q9H992 704 aa11.79□□□□□ -0.52
SLIRP-210ENST00000557431 GCM1Q9NP62 436 aa11.79□□□□□ -0.52
SLIRP-210ENST00000557431 BAG5Q9UL15 447 aa11.79□□□□□ -0.52
SLIRP-210ENST00000557431 NDRG4Q9ULP0 352 aaKnown RBP11.79□□□□□ -0.52
SLIRP-210ENST00000557431 IGHV2-70DA0A0C4DH43 119 aa11.78□□□□□ -0.52
SLIRP-210ENST00000557431 PLATP00750 562 aa11.78□□□□□ -0.52
SLIRP-210ENST00000557431 NR2C1P13056 603 aa11.78□□□□□ -0.52
SLIRP-210ENST00000557431 CTLA4P16410 223 aa11.78□□□□□ -0.52
SLIRP-210ENST00000557431 ZNF26P17031 533 aaPredicted RBP11.78□□□□□ -0.52
SLIRP-210ENST00000557431 SLC9A3P48764 834 aa11.78□□□□□ -0.52
SLIRP-210ENST00000557431 PCBD1P61457 104 aa11.78□□□□□ -0.52
SLIRP-210ENST00000557431 GNB2P62879 340 aa11.78□□□□□ -0.52
SLIRP-210ENST00000557431 MESTQ5EB52 335 aa11.78□□□□□ -0.52
SLIRP-210ENST00000557431 TBPL2Q6SJ96 375 aa11.78□□□□□ -0.52
SLIRP-210ENST00000557431 LYPD2Q6UXB3 125 aa11.78□□□□□ -0.52
SLIRP-210ENST00000557431 VTCN1Q7Z7D3 282 aa11.78□□□□□ -0.52
SLIRP-210ENST00000557431 ZSCAN2Q7Z7L9 614 aaPredicted RBP11.78□□□□□ -0.52
SLIRP-210ENST00000557431 KLBQ86Z14 1044 aa11.78□□□□□ -0.52
SLIRP-210ENST00000557431 NPEPL1Q8NDH3 523 aa11.78□□□□□ -0.52
SLIRP-210ENST00000557431 BHLHE23Q8NDY6 225 aa11.78□□□□□ -0.52
SLIRP-210ENST00000557431 RASD2Q96D21 266 aa11.78□□□□□ -0.52
SLIRP-210ENST00000557431 PRRC1Q96M27 445 aa11.78□□□□□ -0.52
SLIRP-210ENST00000557431 ECSITQ9BQ95 431 aa11.78□□□□□ -0.52
SLIRP-210ENST00000557431 TMEM246Q9BRR3 403 aa11.78□□□□□ -0.52
SLIRP-210ENST00000557431 WDR76Q9H967 626 aa11.78□□□□□ -0.52
SLIRP-210ENST00000557431 ZMAT3Q9HA38 289 aaKnown RBP11.78□□□□□ -0.52
SLIRP-210ENST00000557431 TMEM165Q9HC07 324 aa11.78□□□□□ -0.52
SLIRP-210ENST00000557431 MAN2C1Q9NTJ4 1040 aa11.78□□□□□ -0.52
SLIRP-210ENST00000557431 TBCCD1Q9NVR7 557 aa11.78□□□□□ -0.52
SLIRP-210ENST00000557431 PDP1Q9P0J1 537 aaPredicted RBP11.78□□□□□ -0.52
SLIRP-210ENST00000557431 IL19Q9UHD0 177 aa11.78□□□□□ -0.52
SLIRP-210ENST00000557431 A0A0G2JND7 137 aa11.77□□□□□ -0.53
SLIRP-210ENST00000557431 GMNCA6NCL1 334 aa11.77□□□□□ -0.53
SLIRP-210ENST00000557431 FAM181BA6NEQ2 426 aa11.77□□□□□ -0.53
SLIRP-210ENST00000557431 C12orf71A8MTZ7 269 aa11.77□□□□□ -0.53
SLIRP-210ENST00000557431 EFCAB9A8MZ26 197 aa11.77□□□□□ -0.53
SLIRP-210ENST00000557431 F5H5P2 479 aa11.77□□□□□ -0.53
SLIRP-210ENST00000557431 CDC42EP2O14613 210 aa11.77□□□□□ -0.53
SLIRP-210ENST00000557431 MLNRO43193 412 aa11.77□□□□□ -0.53
SLIRP-210ENST00000557431 IGF2P01344 180 aa11.77□□□□□ -0.53
SLIRP-210ENST00000557431 PMELP40967 661 aa11.77□□□□□ -0.53
SLIRP-210ENST00000557431 GUCA1AP43080 201 aaPredicted RBP11.77□□□□□ -0.53
SLIRP-210ENST00000557431 CCDC92Q53HC0 331 aaPredicted RBP11.77□□□□□ -0.53
SLIRP-210ENST00000557431 C16orf87Q6PH81 154 aa11.77□□□□□ -0.53
SLIRP-210ENST00000557431 ZER1Q7Z7L7 766 aa11.77□□□□□ -0.53
SLIRP-210ENST00000557431 MOGAT3Q86VF5 341 aa11.77□□□□□ -0.53
SLIRP-210ENST00000557431 C10orf82Q8WW14 230 aa11.77□□□□□ -0.53
SLIRP-210ENST00000557431 UPRTQ96BW1 309 aa11.77□□□□□ -0.53
SLIRP-210ENST00000557431 HAVCR1Q96D42 359 aa11.77□□□□□ -0.53
SLIRP-210ENST00000557431 MEGF10Q96KG7 1140 aa11.77□□□□□ -0.53
SLIRP-210ENST00000557431 ZNF583Q96ND8 569 aa11.77□□□□□ -0.53
SLIRP-210ENST00000557431 CDADC1Q9BWV3 514 aa11.77□□□□□ -0.53
SLIRP-210ENST00000557431 LRCH1Q9Y2L9 728 aa11.77□□□□□ -0.53
SLIRP-210ENST00000557431 FFAR1O14842 300 aa11.76□□□□□ -0.53
SLIRP-210ENST00000557431 RER1O15258 196 aa11.76□□□□□ -0.53
SLIRP-210ENST00000557431 HLA-DPB1P04440 258 aa11.76□□□□□ -0.53
SLIRP-210ENST00000557431 VIMP08670 466 aaKnown RBP11.76□□□□□ -0.53
SLIRP-210ENST00000557431 RPL4P36578 427 aaKnown RBP11.76□□□□□ -0.53
SLIRP-210ENST00000557431 MTNR1AP48039 350 aa11.76□□□□□ -0.53
SLIRP-210ENST00000557431 KRTAP10-3P60369 221 aa11.76□□□□□ -0.53
SLIRP-210ENST00000557431 RELBQ01201 579 aa11.76□□□□□ -0.53
SLIRP-210ENST00000557431 GUCY1A3Q02108 690 aa11.76□□□□□ -0.53
SLIRP-210ENST00000557431 SCRN3Q0VDG4 424 aa11.76□□□□□ -0.53
SLIRP-210ENST00000557431 ST3GAL3Q11203 375 aa11.76□□□□□ -0.53
SLIRP-210ENST00000557431 CYLC2Q14093 348 aaPredicted RBP11.76□□□□□ -0.53
SLIRP-210ENST00000557431 MEP1BQ16820 701 aa11.76□□□□□ -0.53
SLIRP-210ENST00000557431 HSP90B2PQ58FF3 399 aa11.76□□□□□ -0.53
SLIRP-210ENST00000557431 SLC27A4Q6P1M0 643 aa11.76□□□□□ -0.53
SLIRP-210ENST00000557431 ARL9Q6T311 187 aa11.76□□□□□ -0.53
SLIRP-210ENST00000557431 FIP1L1Q6UN15 594 aaKnown RBP11.76□□□□□ -0.53
SLIRP-210ENST00000557431 BTNL3Q6UXE8 466 aa11.76□□□□□ -0.53
SLIRP-210ENST00000557431 OAFQ86UD1 273 aa11.76□□□□□ -0.53
SLIRP-210ENST00000557431 C1orf174Q8IYL3 243 aa11.76□□□□□ -0.53
SLIRP-210ENST00000557431 MUC20Q8N307 709 aaPredicted RBP11.76□□□□□ -0.53
SLIRP-210ENST00000557431 OR10S1Q8NGN2 331 aa11.76□□□□□ -0.53
SLIRP-210ENST00000557431 WFDC12Q8WWY7 111 aa11.76□□□□□ -0.53
SLIRP-210ENST00000557431 RAB40AQ8WXH6 277 aa11.76□□□□□ -0.53
SLIRP-210ENST00000557431 DACT3Q96B18 629 aaPredicted RBP11.76□□□□□ -0.53
SLIRP-210ENST00000557431 ZNF570Q96NI8 536 aa11.76□□□□□ -0.53
SLIRP-210ENST00000557431 NUDT16L1Q9BRJ7 211 aaKnown RBP11.76□□□□□ -0.53
SLIRP-210ENST00000557431 SIKE1Q9BRV8 207 aa11.76□□□□□ -0.53
SLIRP-210ENST00000557431 POLR2J2Q9GZM3 115 aaKnown RBP11.76□□□□□ -0.53
SLIRP-210ENST00000557431 SLITRK2Q9H156 845 aa11.76□□□□□ -0.53
SLIRP-210ENST00000557431 POLR2J3Q9H1A7 115 aaKnown RBP11.76□□□□□ -0.53
SLIRP-210ENST00000557431 MED4Q9NPJ6 270 aa11.76□□□□□ -0.53
SLIRP-210ENST00000557431 ASH2LQ9UBL3 628 aa11.76□□□□□ -0.53
SLIRP-210ENST00000557431 IL20RAQ9UHF4 553 aa11.76□□□□□ -0.53
SLIRP-210ENST00000557431 COA3Q9Y2R0 106 aaPredicted RBP11.76□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms