RNA–Protein interactions for RNA: ENST00000557356.5

PSEN1-222, Transcript of presenilin 1, humanhuman

TSL 4

Gene PSEN1, Length 571 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-222ENST00000557356 SP140LQ9H930 580 aa6.75□□□□□ -1.33
PSEN1-222ENST00000557356 EMC7Q9NPA0 242 aa6.75□□□□□ -1.33
PSEN1-222ENST00000557356 HINT3Q9NQE9 182 aaKnown RBP6.75□□□□□ -1.33
PSEN1-222ENST00000557356 CMC2Q9NRP2 79 aa6.75□□□□□ -1.33
PSEN1-222ENST00000557356 TAAR3PQ9P1P4 343 aa6.75□□□□□ -1.33
PSEN1-222ENST00000557356 ZDHHC8Q9ULC8 765 aa6.75□□□□□ -1.33
PSEN1-222ENST00000557356 GRIP1Q9Y3R0 1128 aa6.75□□□□□ -1.33
PSEN1-222ENST00000557356 CADP27708 2225 aa6.74□□□□□ -1.33
PSEN1-222ENST00000557356 PRR14LQ5THK1 2151 aa6.74□□□□□ -1.33
PSEN1-222ENST00000557356 TRIM64A6NGJ6 449 aa6.74□□□□□ -1.33
PSEN1-222ENST00000557356 TRIM64BA6NI03 449 aa6.74□□□□□ -1.33
PSEN1-222ENST00000557356 C17orf100A8MU93 164 aa6.74□□□□□ -1.33
PSEN1-222ENST00000557356 PRR23D1E9PI22 279 aaPredicted RBP6.74□□□□□ -1.33
PSEN1-222ENST00000557356 G3V2T6 193 aa6.74□□□□□ -1.33
PSEN1-222ENST00000557356 DCTN6O00399 190 aa6.74□□□□□ -1.33
PSEN1-222ENST00000557356 RER1O15258 196 aa6.74□□□□□ -1.33
PSEN1-222ENST00000557356 SURF4O15260 269 aa6.74□□□□□ -1.33
PSEN1-222ENST00000557356 TLX2O43763 284 aaPredicted RBP6.74□□□□□ -1.33
PSEN1-222ENST00000557356 TIPRLO75663 272 aa6.74□□□□□ -1.33
PSEN1-222ENST00000557356 MPZL1O95297 269 aa6.74□□□□□ -1.33
PSEN1-222ENST00000557356 SOX14O95416 240 aa6.74□□□□□ -1.33
PSEN1-222ENST00000557356 SCG5P05408 212 aa6.74□□□□□ -1.33
PSEN1-222ENST00000557356 HEXAP06865 529 aa6.74□□□□□ -1.33
PSEN1-222ENST00000557356 PRR23D2P0DMB1 279 aaPredicted RBP6.74□□□□□ -1.33
PSEN1-222ENST00000557356 GAAP10253 952 aa6.74□□□□□ -1.33
PSEN1-222ENST00000557356 RAC2P15153 192 aa6.74□□□□□ -1.33
PSEN1-222ENST00000557356 SELEP16581 610 aa6.74□□□□□ -1.33
PSEN1-222ENST00000557356 USF1P22415 310 aaPredicted RBP6.74□□□□□ -1.33
PSEN1-222ENST00000557356 TNFSF4P23510 183 aa6.74□□□□□ -1.33
PSEN1-222ENST00000557356 GIFP27352 417 aa6.74□□□□□ -1.33
PSEN1-222ENST00000557356 POU1F1P28069 291 aa6.74□□□□□ -1.33
PSEN1-222ENST00000557356 ESRRGP62508 458 aa6.74□□□□□ -1.33
PSEN1-222ENST00000557356 PPP2R2BQ00005 443 aa6.74□□□□□ -1.33
PSEN1-222ENST00000557356 CDK5Q00535 292 aa6.74□□□□□ -1.33
PSEN1-222ENST00000557356 SLC3A1Q07837 685 aa6.74□□□□□ -1.33
PSEN1-222ENST00000557356 PPP1R8Q12972 351 aaKnown RBP6.74□□□□□ -1.33
PSEN1-222ENST00000557356 MALLQ13021 153 aa6.74□□□□□ -1.33
PSEN1-222ENST00000557356 GINS1Q14691 196 aa6.74□□□□□ -1.33
PSEN1-222ENST00000557356 TAF13Q15543 124 aa6.74□□□□□ -1.33
PSEN1-222ENST00000557356 ATP6AP1Q15904 470 aa6.74□□□□□ -1.33
PSEN1-222ENST00000557356 ZNF362Q5T0B9 420 aaPredicted RBP6.74□□□□□ -1.33
PSEN1-222ENST00000557356 ASRGL1Q7L266 308 aa6.74□□□□□ -1.33
PSEN1-222ENST00000557356 PARP8Q8N3A8 854 aa6.74□□□□□ -1.33
PSEN1-222ENST00000557356 SLC37A3Q8NCC5 494 aa6.74□□□□□ -1.33
PSEN1-222ENST00000557356 ABHD4Q8TB40 342 aa6.74□□□□□ -1.33
PSEN1-222ENST00000557356 KLF14Q8TD94 323 aaPredicted RBP6.74□□□□□ -1.33
PSEN1-222ENST00000557356 C10orf105Q8TEF2 133 aa6.74□□□□□ -1.33
PSEN1-222ENST00000557356 PTP4A1Q93096 173 aa6.74□□□□□ -1.33
PSEN1-222ENST00000557356 UTP4Q969X6 686 aaKnown RBP6.74□□□□□ -1.33
PSEN1-222ENST00000557356 HAVCR1Q96D42 359 aa6.74□□□□□ -1.33
PSEN1-222ENST00000557356 MARS2Q96GW9 593 aaKnown RBP6.74□□□□□ -1.33
PSEN1-222ENST00000557356 CENPNQ96H22 339 aaPredicted RBP6.74□□□□□ -1.33
PSEN1-222ENST00000557356 TSSK2Q96PF2 358 aa6.74□□□□□ -1.33
PSEN1-222ENST00000557356 SORCS2Q96PQ0 1159 aa6.74□□□□□ -1.33
PSEN1-222ENST00000557356 DDOQ99489 341 aa6.74□□□□□ -1.33
PSEN1-222ENST00000557356 NIPSNAP1Q9BPW8 284 aa6.74□□□□□ -1.33
PSEN1-222ENST00000557356 RBM4Q9BWF3 364 aaKnown RBP6.74□□□□□ -1.33
PSEN1-222ENST00000557356 HCAR1Q9BXC0 346 aa6.74□□□□□ -1.33
PSEN1-222ENST00000557356 PAPOLBQ9NRJ5 636 aaKnown RBP6.74□□□□□ -1.33
PSEN1-222ENST00000557356 DECR2Q9NUI1 292 aa6.74□□□□□ -1.33
PSEN1-222ENST00000557356 VNN3Q9NY84 501 aa6.74□□□□□ -1.33
PSEN1-222ENST00000557356 CYB5R1Q9UHQ9 305 aa6.74□□□□□ -1.33
PSEN1-222ENST00000557356 NOP16Q9Y3C1 178 aaKnown RBP6.74□□□□□ -1.33
PSEN1-222ENST00000557356 AKAP6Q13023 2319 aa6.74□□□□□ -1.33
PSEN1-222ENST00000557356 FBN2P35556 2912 aa6.74□□□□□ -1.33
PSEN1-222ENST00000557356 CCDC168Q8NDH2 2452 aa6.74□□□□□ -1.33
PSEN1-222ENST00000557356 MYO9AB2RTY4 2548 aa6.74□□□□□ -1.33
PSEN1-222ENST00000557356 TEX15Q9BXT5 2789 aa6.73□□□□□ -1.33
PSEN1-222ENST00000557356 ARID1AO14497 2285 aa6.73□□□□□ -1.33
PSEN1-222ENST00000557356 RNF223E7ERA6 249 aa6.73□□□□□ -1.33
PSEN1-222ENST00000557356 ZNF593O00488 134 aaPredicted RBP6.73□□□□□ -1.33
PSEN1-222ENST00000557356 SMAD7O15105 426 aaKnown RBP6.73□□□□□ -1.33
PSEN1-222ENST00000557356 PRODHO43272 600 aa6.73□□□□□ -1.33
PSEN1-222ENST00000557356 TPD52L2O43399 206 aaKnown RBP6.73□□□□□ -1.33
PSEN1-222ENST00000557356 TFP02787 698 aa6.73□□□□□ -1.33
PSEN1-222ENST00000557356 ADH4P08319 380 aa6.73□□□□□ -1.33
PSEN1-222ENST00000557356 ZNF23P17027 643 aa6.73□□□□□ -1.33
PSEN1-222ENST00000557356 SPI1P17947 270 aa6.73□□□□□ -1.33
PSEN1-222ENST00000557356 PRKACGP22612 351 aa6.73□□□□□ -1.33
PSEN1-222ENST00000557356 WNT5AP41221 380 aa6.73□□□□□ -1.33
PSEN1-222ENST00000557356 NR4A2P43354 598 aa6.73□□□□□ -1.33
PSEN1-222ENST00000557356 ENTPD1P49961 510 aa6.73□□□□□ -1.33
PSEN1-222ENST00000557356 ZNF81P51508 661 aa6.73□□□□□ -1.33
PSEN1-222ENST00000557356 CRISP1P54107 249 aa6.73□□□□□ -1.33
PSEN1-222ENST00000557356 CRMP1Q14194 572 aa6.73□□□□□ -1.33
PSEN1-222ENST00000557356 CARTPTQ16568 116 aa6.73□□□□□ -1.33
PSEN1-222ENST00000557356 CCDC92Q53HC0 331 aaPredicted RBP6.73□□□□□ -1.33
PSEN1-222ENST00000557356 SLC35D3Q5M8T2 416 aa6.73□□□□□ -1.33
PSEN1-222ENST00000557356 SLC18B1Q6NT16 456 aa6.73□□□□□ -1.33
PSEN1-222ENST00000557356 FAHD1Q6P587 224 aa6.73□□□□□ -1.33
PSEN1-222ENST00000557356 ZNF101Q8IZC7 436 aa6.73□□□□□ -1.33
PSEN1-222ENST00000557356 PAQR4Q8N4S7 273 aaPredicted RBP6.73□□□□□ -1.33
PSEN1-222ENST00000557356 ZNF525Q8N782 197 aa6.73□□□□□ -1.33
PSEN1-222ENST00000557356 CYB561A3Q8NBI2 242 aa6.73□□□□□ -1.33
PSEN1-222ENST00000557356 OR8D4Q8NGM9 314 aa6.73□□□□□ -1.33
PSEN1-222ENST00000557356 SLC25A40Q8TBP6 338 aa6.73□□□□□ -1.33
PSEN1-222ENST00000557356 HPS1Q92902 700 aa6.73□□□□□ -1.33
PSEN1-222ENST00000557356 ITFG2Q969R8 447 aa6.73□□□□□ -1.33
PSEN1-222ENST00000557356 SLCO4A1Q96BD0 722 aa6.73□□□□□ -1.33
PSEN1-222ENST00000557356 OTULINQ96BN8 352 aa6.73□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms