RNA–Protein interactions for RNA: ENST00000557352.1

VRK1-207, Transcript of vaccinia related kinase 1, humanhuman

TSL 5

Gene VRK1, Length 599 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1-207ENST00000557352 EFCAB11Q9BUY7 163 aa2.48□□□□□ -2.01
VRK1-207ENST00000557352 SHCBP1LQ9BZQ2 653 aa2.48□□□□□ -2.01
VRK1-207ENST00000557352 OR2AG1Q9H205 316 aa2.48□□□□□ -2.01
VRK1-207ENST00000557352 KIR3DX1Q9H7L2 352 aa2.48□□□□□ -2.01
VRK1-207ENST00000557352 UCK1Q9HA47 277 aa2.48□□□□□ -2.01
VRK1-207ENST00000557352 NRN1Q9NPD7 142 aa2.48□□□□□ -2.01
VRK1-207ENST00000557352 UTP6Q9NYH9 597 aaKnown RBP2.48□□□□□ -2.01
VRK1-207ENST00000557352 CD274Q9NZQ7 290 aa2.48□□□□□ -2.01
VRK1-207ENST00000557352 STOX2Q9P2F5 926 aaPredicted RBP2.48□□□□□ -2.01
VRK1-207ENST00000557352 ANKMY1Q9P2S6 941 aa2.48□□□□□ -2.01
VRK1-207ENST00000557352 GALPQ9UBC7 116 aa2.48□□□□□ -2.01
VRK1-207ENST00000557352 OPTCQ9UBM4 332 aa2.48□□□□□ -2.01
VRK1-207ENST00000557352 IL19Q9UHD0 177 aa2.48□□□□□ -2.01
VRK1-207ENST00000557352 CD84Q9UIB8 345 aa2.48□□□□□ -2.01
VRK1-207ENST00000557352 ZNF225Q9UK10 706 aa2.48□□□□□ -2.01
VRK1-207ENST00000557352 SNX6Q9UNH7 406 aa2.48□□□□□ -2.01
VRK1-207ENST00000557352 ZNF175Q9Y473 711 aa2.48□□□□□ -2.01
VRK1-207ENST00000557352 GMEB1Q9Y692 573 aa2.48□□□□□ -2.01
VRK1-207ENST00000557352 PTPRBP23467 1997 aa2.48□□□□□ -2.01
VRK1-207ENST00000557352 EML6Q6ZMW3 1958 aa2.48□□□□□ -2.01
VRK1-207ENST00000557352 KIAA1549Q9HCM3 1950 aa2.48□□□□□ -2.01
VRK1-207ENST00000557352 FREM3P0C091 2139 aa2.48□□□□□ -2.01
VRK1-207ENST00000557352 RIF1Q5UIP0 2472 aaKnown RBP2.48□□□□□ -2.01
VRK1-207ENST00000557352 AHCTF1Q8WYP5 2266 aa2.48□□□□□ -2.01
VRK1-207ENST00000557352 C15orf38-AP3S2A0A0A6YYH1 394 aa2.47□□□□□ -2.01
VRK1-207ENST00000557352 IGHV1OR15-9A0A0B4J2B8 117 aa2.47□□□□□ -2.01
VRK1-207ENST00000557352 SPTY2D1-AS1A0A0U1RR47 76 aa2.47□□□□□ -2.01
VRK1-207ENST00000557352 ERICH4A6NGS2 130 aa2.47□□□□□ -2.01
VRK1-207ENST00000557352 OR2AG2A6NM03 316 aa2.47□□□□□ -2.01
VRK1-207ENST00000557352 LSM1O15116 133 aaKnown RBP2.47□□□□□ -2.01
VRK1-207ENST00000557352 UBDO15205 165 aa2.47□□□□□ -2.01
VRK1-207ENST00000557352 TBX19O60806 448 aa2.47□□□□□ -2.01
VRK1-207ENST00000557352 MTX2O75431 263 aa2.47□□□□□ -2.01
VRK1-207ENST00000557352 POP7O75817 140 aaKnown RBP2.47□□□□□ -2.01
VRK1-207ENST00000557352 PDE5AO76074 875 aa2.47□□□□□ -2.01
VRK1-207ENST00000557352 SEMA3DO95025 777 aa2.47□□□□□ -2.01
VRK1-207ENST00000557352 PCCBP05166 539 aa2.47□□□□□ -2.01
VRK1-207ENST00000557352 IGHV4-34P06331 123 aa2.47□□□□□ -2.01
VRK1-207ENST00000557352 KRT16P08779 473 aa2.47□□□□□ -2.01
VRK1-207ENST00000557352 SLC35G4P0C7Q5 338 aa2.47□□□□□ -2.01
VRK1-207ENST00000557352 PRPS2P11908 318 aa2.47□□□□□ -2.01
VRK1-207ENST00000557352 TDGF1P13385 188 aa2.47□□□□□ -2.01
VRK1-207ENST00000557352 IL9P15248 144 aa2.47□□□□□ -2.01
VRK1-207ENST00000557352 IGHV1-2P23083 117 aa2.47□□□□□ -2.01
VRK1-207ENST00000557352 CXCR2P25025 360 aa2.47□□□□□ -2.01
VRK1-207ENST00000557352 HMOX2P30519 316 aa2.47□□□□□ -2.01
VRK1-207ENST00000557352 AKT2P31751 481 aa2.47□□□□□ -2.01
VRK1-207ENST00000557352 CCL11P51671 97 aa2.47□□□□□ -2.01
VRK1-207ENST00000557352 ZNF85Q03923 595 aa2.47□□□□□ -2.01
VRK1-207ENST00000557352 EMX2Q04743 252 aa2.47□□□□□ -2.01
VRK1-207ENST00000557352 SIGLEC14Q08ET2 396 aa2.47□□□□□ -2.01
VRK1-207ENST00000557352 LRRC74AQ0VAA2 488 aa2.47□□□□□ -2.01
VRK1-207ENST00000557352 STX5Q13190 355 aa2.47□□□□□ -2.01
VRK1-207ENST00000557352 GRB7Q14451 532 aa2.47□□□□□ -2.01
VRK1-207ENST00000557352 PRR4Q16378 134 aa2.47□□□□□ -2.01
VRK1-207ENST00000557352 TRMT5Q32P41 509 aaKnown RBP2.47□□□□□ -2.01
VRK1-207ENST00000557352 SPIN4Q56A73 249 aa2.47□□□□□ -2.01
VRK1-207ENST00000557352 PRMT9Q6P2P2 845 aa2.47□□□□□ -2.01
VRK1-207ENST00000557352 AGTRAPQ6RW13 159 aa2.47□□□□□ -2.01
VRK1-207ENST00000557352 DPY19L2P2Q6ZN68 376 aa2.47□□□□□ -2.01
VRK1-207ENST00000557352 ARPINQ7Z6K5 226 aa2.47□□□□□ -2.01
VRK1-207ENST00000557352 SYVN1Q86TM6 617 aa2.47□□□□□ -2.01
VRK1-207ENST00000557352 YRDCQ86U90 279 aaKnown RBP2.47□□□□□ -2.01
VRK1-207ENST00000557352 C17orf82Q86X59 251 aaPredicted RBP2.47□□□□□ -2.01
VRK1-207ENST00000557352 C10orf67Q8IYJ2 551 aa2.47□□□□□ -2.01
VRK1-207ENST00000557352 PGAM4Q8N0Y7 254 aa2.47□□□□□ -2.01
VRK1-207ENST00000557352 CADM2Q8N3J6 435 aa2.47□□□□□ -2.01
VRK1-207ENST00000557352 DEFB123Q8N688 67 aa2.47□□□□□ -2.01
VRK1-207ENST00000557352 NATD1Q8N6N6 113 aa2.47□□□□□ -2.01
VRK1-207ENST00000557352 TEX9Q8N6V9 391 aa2.47□□□□□ -2.01
VRK1-207ENST00000557352 ZNF433Q8N7K0 673 aaPredicted RBP2.47□□□□□ -2.01
VRK1-207ENST00000557352 CCNYL1Q8N7R7 359 aa2.47□□□□□ -2.01
VRK1-207ENST00000557352 TSTD1Q8NFU3 115 aa2.47□□□□□ -2.01
VRK1-207ENST00000557352 TTLQ8NG68 377 aa2.47□□□□□ -2.01
VRK1-207ENST00000557352 OR4F6Q8NGB9 312 aa2.47□□□□□ -2.01
VRK1-207ENST00000557352 OR2L8Q8NGY9 312 aa2.47□□□□□ -2.01
VRK1-207ENST00000557352 OR52J3Q8NH60 311 aa2.47□□□□□ -2.01
VRK1-207ENST00000557352 RFESDQ8TAC1 157 aa2.47□□□□□ -2.01
VRK1-207ENST00000557352 STARD8Q92502 1023 aa2.47□□□□□ -2.01
VRK1-207ENST00000557352 PHYHIPQ92561 330 aa2.47□□□□□ -2.01
VRK1-207ENST00000557352 TFGQ92734 400 aaPredicted RBP2.47□□□□□ -2.01
VRK1-207ENST00000557352 IL22RA2Q969J5 263 aa2.47□□□□□ -2.01
VRK1-207ENST00000557352 TMEM45BQ96B21 275 aa2.47□□□□□ -2.01
VRK1-207ENST00000557352 TESCQ96BS2 214 aa2.47□□□□□ -2.01
VRK1-207ENST00000557352 ROPN1LQ96C74 230 aa2.47□□□□□ -2.01
VRK1-207ENST00000557352 CXorf40BQ96DE9 158 aa2.47□□□□□ -2.01
VRK1-207ENST00000557352 CMTM7Q96FZ5 175 aa2.47□□□□□ -2.01
VRK1-207ENST00000557352 NSMCE2Q96MF7 247 aa2.47□□□□□ -2.01
VRK1-207ENST00000557352 RILPQ96NA2 401 aa2.47□□□□□ -2.01
VRK1-207ENST00000557352 OR2M4Q96R27 311 aa2.47□□□□□ -2.01
VRK1-207ENST00000557352 CTRCQ99895 268 aa2.47□□□□□ -2.01
VRK1-207ENST00000557352 RTBDNQ9BSG5 229 aaPredicted RBP2.47□□□□□ -2.01
VRK1-207ENST00000557352 HCAR1Q9BXC0 346 aa2.47□□□□□ -2.01
VRK1-207ENST00000557352 CHRNA10Q9GZZ6 450 aa2.47□□□□□ -2.01
VRK1-207ENST00000557352 ATG10Q9H0Y0 220 aa2.47□□□□□ -2.01
VRK1-207ENST00000557352 OPN3Q9H1Y3 402 aaPredicted RBP2.47□□□□□ -2.01
VRK1-207ENST00000557352 RHBGQ9H310 441 aa2.47□□□□□ -2.01
VRK1-207ENST00000557352 MRPL40Q9NQ50 206 aaKnown RBP2.47□□□□□ -2.01
VRK1-207ENST00000557352 ZNF331Q9NQX6 463 aaPredicted RBP2.47□□□□□ -2.01
VRK1-207ENST00000557352 AIG1Q9NVV5 245 aa2.47□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms