RNA–Protein interactions for RNA: ENST00000557269.5

SHMT2-227, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 5

Gene SHMT2, Length 576 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-227ENST00000557269 WACQ9BTA9 647 aa11.11□□□□□ -0.63
SHMT2-227ENST00000557269 ABHD6Q9BV23 337 aa11.11□□□□□ -0.63
SHMT2-227ENST00000557269 TTTY10Q9BZA0 68 aa11.11□□□□□ -0.63
SHMT2-227ENST00000557269 YIPF3Q9GZM5 350 aa11.11□□□□□ -0.63
SHMT2-227ENST00000557269 NGBQ9NPG2 151 aa11.11□□□□□ -0.63
SHMT2-227ENST00000557269 PLEK2Q9NYT0 353 aa11.11□□□□□ -0.63
SHMT2-227ENST00000557269 RAB26Q9ULW5 256 aa11.11□□□□□ -0.63
SHMT2-227ENST00000557269 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP11.11□□□□□ -0.63
SHMT2-227ENST00000557269 IGHV2OR16-5A0A0B4J2B6 119 aa11.1□□□□□ -0.63
SHMT2-227ENST00000557269 IQCMA0A1B0GVH7 501 aa11.1□□□□□ -0.63
SHMT2-227ENST00000557269 ATP6V1G2-DDX39BF2Z307 99 aa11.1□□□□□ -0.63
SHMT2-227ENST00000557269 J3QRE1 110 aa11.1□□□□□ -0.63
SHMT2-227ENST00000557269 ABCD4O14678 606 aa11.1□□□□□ -0.63
SHMT2-227ENST00000557269 MAGEB4O15481 346 aaPredicted RBP11.1□□□□□ -0.63
SHMT2-227ENST00000557269 ZNF35P13682 527 aa11.1□□□□□ -0.63
SHMT2-227ENST00000557269 PTAFRP25105 342 aa11.1□□□□□ -0.63
SHMT2-227ENST00000557269 HGFACQ04756 655 aa11.1□□□□□ -0.63
SHMT2-227ENST00000557269 PLP2Q04941 152 aa11.1□□□□□ -0.63
SHMT2-227ENST00000557269 TMED1Q13445 227 aa11.1□□□□□ -0.63
SHMT2-227ENST00000557269 RAB35Q15286 201 aa11.1□□□□□ -0.63
SHMT2-227ENST00000557269 KRTAP27-1Q3LI81 207 aa11.1□□□□□ -0.63
SHMT2-227ENST00000557269 ADAM5Q6NVV9 412 aa11.1□□□□□ -0.63
SHMT2-227ENST00000557269 TMEM108Q6UXF1 575 aa11.1□□□□□ -0.63
SHMT2-227ENST00000557269 SSX6Q7RTT6 188 aa11.1□□□□□ -0.63
SHMT2-227ENST00000557269 KBTBD8Q8NFY9 601 aa11.1□□□□□ -0.63
SHMT2-227ENST00000557269 LILRB1Q8NHL6 650 aaPredicted RBP11.1□□□□□ -0.63
SHMT2-227ENST00000557269 THEM6Q8WUY1 208 aa11.1□□□□□ -0.63
SHMT2-227ENST00000557269 SLAMF6Q96DU3 332 aa11.1□□□□□ -0.63
SHMT2-227ENST00000557269 CNBD2Q96M20 576 aa11.1□□□□□ -0.63
SHMT2-227ENST00000557269 TBX5Q99593 518 aa11.1□□□□□ -0.63
SHMT2-227ENST00000557269 TMEM204Q9BSN7 226 aa11.1□□□□□ -0.63
SHMT2-227ENST00000557269 C1orf198Q9H425 327 aa11.1□□□□□ -0.63
SHMT2-227ENST00000557269 ESRP2Q9H6T0 727 aaKnown RBP11.1□□□□□ -0.63
SHMT2-227ENST00000557269 EXOGQ9Y2C4 368 aaKnown RBP11.1□□□□□ -0.63
SHMT2-227ENST00000557269 MYRFQ9Y2G1 1151 aa11.1□□□□□ -0.63
SHMT2-227ENST00000557269 ANKHD1Q8IWZ3 2542 aaKnown RBP11.1□□□□□ -0.63
SHMT2-227ENST00000557269 A0A1W2PQL4 384 aaPredicted RBP11.09□□□□□ -0.63
SHMT2-227ENST00000557269 C5orf49A4QMS7 147 aa11.09□□□□□ -0.63
SHMT2-227ENST00000557269 SHISA9B4DS77 424 aa11.09□□□□□ -0.63
SHMT2-227ENST00000557269 PSMD9O00233 223 aa11.09□□□□□ -0.63
SHMT2-227ENST00000557269 XPNPEP2O43895 674 aa11.09□□□□□ -0.63
SHMT2-227ENST00000557269 TMCC2O75069 709 aa11.09□□□□□ -0.63
SHMT2-227ENST00000557269 CTAG2O75638 210 aa11.09□□□□□ -0.63
SHMT2-227ENST00000557269 CD3EP07766 207 aa11.09□□□□□ -0.63
SHMT2-227ENST00000557269 CCNOP22674 350 aa11.09□□□□□ -0.63
SHMT2-227ENST00000557269 ANOS1P23352 680 aa11.09□□□□□ -0.63
SHMT2-227ENST00000557269 PAX7P23759 505 aa11.09□□□□□ -0.63
SHMT2-227ENST00000557269 WNT5AP41221 380 aa11.09□□□□□ -0.63
SHMT2-227ENST00000557269 SLC15A1P46059 708 aa11.09□□□□□ -0.63
SHMT2-227ENST00000557269 HTR5AP47898 357 aa11.09□□□□□ -0.63
SHMT2-227ENST00000557269 NAA40Q86UY6 237 aa11.09□□□□□ -0.63
SHMT2-227ENST00000557269 ALDH16A1Q8IZ83 802 aa11.09□□□□□ -0.63
SHMT2-227ENST00000557269 PIAS4Q8N2W9 510 aaPredicted RBP11.09□□□□□ -0.63
SHMT2-227ENST00000557269 ZNF454Q8N9F8 522 aa11.09□□□□□ -0.63
SHMT2-227ENST00000557269 OR10H4Q8NGA5 316 aa11.09□□□□□ -0.63
SHMT2-227ENST00000557269 MARVELD3Q96A59 401 aa11.09□□□□□ -0.63
SHMT2-227ENST00000557269 HDHD2Q9H0R4 259 aa11.09□□□□□ -0.63
SHMT2-227ENST00000557269 SLC24A3Q9HC58 644 aa11.09□□□□□ -0.63
SHMT2-227ENST00000557269 MOV10Q9HCE1 1003 aaKnown RBP11.09□□□□□ -0.63
SHMT2-227ENST00000557269 CENPMQ9NSP4 180 aa11.09□□□□□ -0.63
SHMT2-227ENST00000557269 DDX28Q9NUL7 540 aaKnown RBP11.09□□□□□ -0.63
SHMT2-227ENST00000557269 MRPS18AQ9NVS2 196 aaKnown RBP11.09□□□□□ -0.63
SHMT2-227ENST00000557269 SLCO1C1Q9NYB5 712 aa11.09□□□□□ -0.63
SHMT2-227ENST00000557269 UBAP1Q9NZ09 502 aa11.09□□□□□ -0.63
SHMT2-227ENST00000557269 LAMP5Q9UJQ1 280 aa11.09□□□□□ -0.63
SHMT2-227ENST00000557269 RPL36Q9Y3U8 105 aaKnown RBP11.09□□□□□ -0.63
SHMT2-227ENST00000557269 C5orf63A6NC05 138 aa11.08□□□□□ -0.64
SHMT2-227ENST00000557269 DENRO43583 198 aaKnown RBP11.08□□□□□ -0.64
SHMT2-227ENST00000557269 LYNP07948 512 aa11.08□□□□□ -0.64
SHMT2-227ENST00000557269 COX5BP10606 129 aa11.08□□□□□ -0.64
SHMT2-227ENST00000557269 PRF1P14222 555 aa11.08□□□□□ -0.64
SHMT2-227ENST00000557269 APLNRP35414 380 aa11.08□□□□□ -0.64
SHMT2-227ENST00000557269 ATP6V1E1P36543 226 aa11.08□□□□□ -0.64
SHMT2-227ENST00000557269 OPRL1P41146 370 aa11.08□□□□□ -0.64
SHMT2-227ENST00000557269 GDI2P50395 445 aaKnown RBP11.08□□□□□ -0.64
SHMT2-227ENST00000557269 NR1H2P55055 460 aa11.08□□□□□ -0.64
SHMT2-227ENST00000557269 CXCR4P61073 352 aa11.08□□□□□ -0.64
SHMT2-227ENST00000557269 MVKQ03426 396 aa11.08□□□□□ -0.64
SHMT2-227ENST00000557269 ZNF85Q03923 595 aa11.08□□□□□ -0.64
SHMT2-227ENST00000557269 POU4F2Q12837 409 aa11.08□□□□□ -0.64
SHMT2-227ENST00000557269 C6orf141Q5SZD1 244 aa11.08□□□□□ -0.64
SHMT2-227ENST00000557269 SLC22A25Q6T423 547 aa11.08□□□□□ -0.64
SHMT2-227ENST00000557269 LRRN1Q6UXK5 716 aa11.08□□□□□ -0.64
SHMT2-227ENST00000557269 BPIFB6Q8NFQ5 453 aa11.08□□□□□ -0.64
SHMT2-227ENST00000557269 OR52I1Q8NGK6 324 aa11.08□□□□□ -0.64
SHMT2-227ENST00000557269 RNF133Q8WVZ7 376 aa11.08□□□□□ -0.64
SHMT2-227ENST00000557269 SGCDQ92629 289 aa11.08□□□□□ -0.64
SHMT2-227ENST00000557269 GGHQ92820 318 aa11.08□□□□□ -0.64
SHMT2-227ENST00000557269 RADILQ96JH8 1075 aa11.08□□□□□ -0.64
SHMT2-227ENST00000557269 COQ7Q99807 217 aa11.08□□□□□ -0.64
SHMT2-227ENST00000557269 ATF6BQ99941 703 aa11.08□□□□□ -0.64
SHMT2-227ENST00000557269 ZNF649Q9BS31 505 aa11.08□□□□□ -0.64
SHMT2-227ENST00000557269 OR51B6Q9H340 312 aa11.08□□□□□ -0.64
SHMT2-227ENST00000557269 FBXL3Q9UKT7 428 aa11.08□□□□□ -0.64
SHMT2-227ENST00000557269 RNF115Q9Y4L5 304 aa11.08□□□□□ -0.64
SHMT2-227ENST00000557269 SNTNA6NMZ2 147 aa11.07□□□□□ -0.64
SHMT2-227ENST00000557269 E7EQL1 145 aa11.07□□□□□ -0.64
SHMT2-227ENST00000557269 ZNF670-ZNF695F2Z2N8 137 aa11.07□□□□□ -0.64
SHMT2-227ENST00000557269 F5H5K5 113 aa11.07□□□□□ -0.64
SHMT2-227ENST00000557269 NGFP01138 241 aa11.07□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms