RNA–Protein interactions for RNA: ENST00000556973.1

LINC00239-201, long intergenic non-protein coding RNA 239, humanhuman

TSL 3 BASIC

Gene LINC00239, Length 639 nt, Biotype lincRNA, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00239-201ENST00000556973 RHNO1Q9BSD3 238 aa9.18□□□□□ -0.94
LINC00239-201ENST00000556973 HDHD2Q9H0R4 259 aa9.18□□□□□ -0.94
LINC00239-201ENST00000556973 OR51B6Q9H340 312 aa9.18□□□□□ -0.94
LINC00239-201ENST00000556973 DYNLRB1Q9NP97 96 aa9.18□□□□□ -0.94
LINC00239-201ENST00000556973 DLL4Q9NR61 685 aa9.18□□□□□ -0.94
LINC00239-201ENST00000556973 MRPL22Q9NWU5 206 aaKnown RBP9.18□□□□□ -0.94
LINC00239-201ENST00000556973 SLCO1C1Q9NYB5 712 aa9.18□□□□□ -0.94
LINC00239-201ENST00000556973 CYB5R1Q9UHQ9 305 aa9.18□□□□□ -0.94
LINC00239-201ENST00000556973 FZR1Q9UM11 496 aa9.18□□□□□ -0.94
LINC00239-201ENST00000556973 ARFGEF3Q5TH69 2177 aa9.17□□□□□ -0.94
LINC00239-201ENST00000556973 IGLV3-9A0A075B6K5 115 aa9.17□□□□□ -0.94
LINC00239-201ENST00000556973 OR6C6A6NF89 314 aa9.17□□□□□ -0.94
LINC00239-201ENST00000556973 PRR23D1E9PI22 279 aaPredicted RBP9.17□□□□□ -0.94
LINC00239-201ENST00000556973 H3BSA7 217 aa9.17□□□□□ -0.94
LINC00239-201ENST00000556973 M0R233 179 aa9.17□□□□□ -0.94
LINC00239-201ENST00000556973 SURF4O15260 269 aa9.17□□□□□ -0.94
LINC00239-201ENST00000556973 ABHD16AO95870 558 aa9.17□□□□□ -0.94
LINC00239-201ENST00000556973 NGFP01138 241 aa9.17□□□□□ -0.94
LINC00239-201ENST00000556973 IGHV3-13P01766 116 aa9.17□□□□□ -0.94
LINC00239-201ENST00000556973 ADRA2AP08913 450 aa9.17□□□□□ -0.94
LINC00239-201ENST00000556973 PRR23D2P0DMB1 279 aaPredicted RBP9.17□□□□□ -0.94
LINC00239-201ENST00000556973 CLUP10909 449 aa9.17□□□□□ -0.94
LINC00239-201ENST00000556973 GCH1P30793 250 aa9.17□□□□□ -0.94
LINC00239-201ENST00000556973 KLF3P57682 345 aaPredicted RBP9.17□□□□□ -0.94
LINC00239-201ENST00000556973 PPP1CBP62140 327 aa9.17□□□□□ -0.94
LINC00239-201ENST00000556973 DBPQ10586 325 aaPredicted RBP9.17□□□□□ -0.94
LINC00239-201ENST00000556973 ECH1Q13011 328 aa9.17□□□□□ -0.94
LINC00239-201ENST00000556973 TNK1Q13470 666 aa9.17□□□□□ -0.94
LINC00239-201ENST00000556973 PTGES3Q15185 160 aaKnown RBP9.17□□□□□ -0.94
LINC00239-201ENST00000556973 TEX30Q5JUR7 227 aa9.17□□□□□ -0.94
LINC00239-201ENST00000556973 CLEC2AQ6UVW9 174 aa9.17□□□□□ -0.94
LINC00239-201ENST00000556973 LRP11Q86VZ4 500 aa9.17□□□□□ -0.94
LINC00239-201ENST00000556973 ICA1LQ8NDH6 482 aa9.17□□□□□ -0.94
LINC00239-201ENST00000556973 OR51L1Q8NGJ5 315 aa9.17□□□□□ -0.94
LINC00239-201ENST00000556973 OR9Q1Q8NGQ5 310 aa9.17□□□□□ -0.94
LINC00239-201ENST00000556973 ABHD4Q8TB40 342 aa9.17□□□□□ -0.94
LINC00239-201ENST00000556973 PYDC1Q8WXC3 89 aa9.17□□□□□ -0.94
LINC00239-201ENST00000556973 OTULINQ96BN8 352 aa9.17□□□□□ -0.94
LINC00239-201ENST00000556973 MARS2Q96GW9 593 aaKnown RBP9.17□□□□□ -0.94
LINC00239-201ENST00000556973 COG8Q96MW5 612 aa9.17□□□□□ -0.94
LINC00239-201ENST00000556973 SORCS2Q96PQ0 1159 aa9.17□□□□□ -0.94
LINC00239-201ENST00000556973 PITX2Q99697 317 aa9.17□□□□□ -0.94
LINC00239-201ENST00000556973 COQ7Q99807 217 aa9.17□□□□□ -0.94
LINC00239-201ENST00000556973 OSBPL10Q9BXB5 764 aa9.17□□□□□ -0.94
LINC00239-201ENST00000556973 GABARAPL1Q9H0R8 117 aa9.17□□□□□ -0.94
LINC00239-201ENST00000556973 SEMA6AQ9H2E6 1030 aa9.17□□□□□ -0.94
LINC00239-201ENST00000556973 SLC25A19Q9HC21 320 aa9.17□□□□□ -0.94
LINC00239-201ENST00000556973 MYOZ1Q9NP98 299 aaPredicted RBP9.17□□□□□ -0.94
LINC00239-201ENST00000556973 KRT84Q9NSB2 600 aa9.17□□□□□ -0.94
LINC00239-201ENST00000556973 GRIP1Q9Y3R0 1128 aa9.17□□□□□ -0.94
LINC00239-201ENST00000556973 ZNF469Q96JG9 3925 aaPredicted RBP9.16□□□□□ -0.94
LINC00239-201ENST00000556973 A0A1W2PPW3 197 aa9.16□□□□□ -0.94
LINC00239-201ENST00000556973 TRIM64A6NGJ6 449 aa9.16□□□□□ -0.94
LINC00239-201ENST00000556973 TVP23AA6NH52 213 aa9.16□□□□□ -0.94
LINC00239-201ENST00000556973 TRIM64BA6NI03 449 aa9.16□□□□□ -0.94
LINC00239-201ENST00000556973 FAM183AA6NL82 134 aa9.16□□□□□ -0.94
LINC00239-201ENST00000556973 H7C1Q1 480 aa9.16□□□□□ -0.94
LINC00239-201ENST00000556973 J3QW42 95 aa9.16□□□□□ -0.94
LINC00239-201ENST00000556973 ZNF593O00488 134 aaPredicted RBP9.16□□□□□ -0.94
LINC00239-201ENST00000556973 GLCEO94923 617 aa9.16□□□□□ -0.94
LINC00239-201ENST00000556973 CLPTM1O96005 669 aa9.16□□□□□ -0.94
LINC00239-201ENST00000556973 GYPBP06028 91 aa9.16□□□□□ -0.94
LINC00239-201ENST00000556973 INHBBP09529 407 aa9.16□□□□□ -0.94
LINC00239-201ENST00000556973 CSF3P09919 207 aa9.16□□□□□ -0.94
LINC00239-201ENST00000556973 LIPAP38571 399 aa9.16□□□□□ -0.94
LINC00239-201ENST00000556973 RGS6P49758 472 aa9.16□□□□□ -0.94
LINC00239-201ENST00000556973 ERVS71-1P61550 626 aa9.16□□□□□ -0.94
LINC00239-201ENST00000556973 PCK2Q16822 640 aa9.16□□□□□ -0.94
LINC00239-201ENST00000556973 LINC01590Q5TEZ4 76 aa9.16□□□□□ -0.94
LINC00239-201ENST00000556973 MBNL2Q5VZF2 373 aaKnown RBP9.16□□□□□ -0.94
LINC00239-201ENST00000556973 TMEM236Q5W0B7 351 aa9.16□□□□□ -0.94
LINC00239-201ENST00000556973 KDM4DQ6B0I6 523 aa9.16□□□□□ -0.94
LINC00239-201ENST00000556973 CFAP77Q6ZQR2 320 aa9.16□□□□□ -0.94
LINC00239-201ENST00000556973 LINC00346Q8IVM7 164 aa9.16□□□□□ -0.94
LINC00239-201ENST00000556973 ZCCHC24Q8N2G6 241 aaKnown RBP9.16□□□□□ -0.94
LINC00239-201ENST00000556973 CIARTQ8N365 385 aaPredicted RBP9.16□□□□□ -0.94
LINC00239-201ENST00000556973 ZNF511Q8NB15 262 aa9.16□□□□□ -0.94
LINC00239-201ENST00000556973 OR5L1Q8NGL2 311 aa9.16□□□□□ -0.94
LINC00239-201ENST00000556973 SLC25A40Q8TBP6 338 aa9.16□□□□□ -0.94
LINC00239-201ENST00000556973 KLF14Q8TD94 323 aaPredicted RBP9.16□□□□□ -0.94
LINC00239-201ENST00000556973 PLEKHA8Q96JA3 519 aa9.16□□□□□ -0.94
LINC00239-201ENST00000556973 HCAR1Q9BXC0 346 aa9.16□□□□□ -0.94
LINC00239-201ENST00000556973 OR2J1Q9GZK6 312 aa9.16□□□□□ -0.94
LINC00239-201ENST00000556973 WDR76Q9H967 626 aa9.16□□□□□ -0.94
LINC00239-201ENST00000556973 TAAR3PQ9P1P4 343 aa9.16□□□□□ -0.94
LINC00239-201ENST00000556973 MYEF2Q9P2K5 600 aaKnown RBP9.16□□□□□ -0.94
LINC00239-201ENST00000556973 ENOPH1Q9UHY7 261 aa9.16□□□□□ -0.94
LINC00239-201ENST00000556973 OAZ3Q9UMX2 235 aa9.16□□□□□ -0.94
LINC00239-201ENST00000556973 CHD3Q12873 2000 aaKnown RBP9.15□□□□□ -0.94
LINC00239-201ENST00000556973 PLCE1Q9P212 2302 aa9.15□□□□□ -0.94
LINC00239-201ENST00000556973 LOC390937A0A1W2PQ73 354 aa9.15□□□□□ -0.94
LINC00239-201ENST00000556973 C17orf100A8MU93 164 aa9.15□□□□□ -0.94
LINC00239-201ENST00000556973 H3BNX3 289 aa9.15□□□□□ -0.94
LINC00239-201ENST00000556973 NDUFS8O00217 210 aa9.15□□□□□ -0.94
LINC00239-201ENST00000556973 LY6HO94772 140 aa9.15□□□□□ -0.94
LINC00239-201ENST00000556973 MT-ND5P03915 603 aa9.15□□□□□ -0.94
LINC00239-201ENST00000556973 DBHP09172 617 aa9.15□□□□□ -0.94
LINC00239-201ENST00000556973 GSTT1P30711 240 aa9.15□□□□□ -0.94
LINC00239-201ENST00000556973 ALDH3B1P43353 468 aa9.15□□□□□ -0.94
LINC00239-201ENST00000556973 ENTPD1P49961 510 aa9.15□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms