RNA–Protein interactions for RNA: ENST00000556433.5

ACTN1-220, Transcript of actinin alpha 1, humanhuman

TSL 3

Gene ACTN1, Length 1,259 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-220ENST00000556433 NDUFAF4Q9P032 175 aa19.11■□□□□ 0.65
ACTN1-220ENST00000556433 EGFL7Q9UHF1 273 aa19.11■□□□□ 0.65
ACTN1-220ENST00000556433 IL20RAQ9UHF4 553 aa19.11■□□□□ 0.65
ACTN1-220ENST00000556433 IER3IP1Q9Y5U9 82 aa19.11■□□□□ 0.65
ACTN1-220ENST00000556433 IMPA2O14732 288 aa19.1■□□□□ 0.65
ACTN1-220ENST00000556433 RHCEP18577 417 aa19.1■□□□□ 0.65
ACTN1-220ENST00000556433 KITLGP21583 273 aa19.1■□□□□ 0.65
ACTN1-220ENST00000556433 GATA3P23771 443 aa19.1■□□□□ 0.65
ACTN1-220ENST00000556433 OMPP47874 163 aa19.1■□□□□ 0.65
ACTN1-220ENST00000556433 LIMS1P48059 325 aa19.1■□□□□ 0.65
ACTN1-220ENST00000556433 LSM6P62312 80 aaKnown RBP19.1■□□□□ 0.65
ACTN1-220ENST00000556433 GLYATQ6IB77 296 aa19.1■□□□□ 0.65
ACTN1-220ENST00000556433 NANPQ8TBE9 248 aa19.1■□□□□ 0.65
ACTN1-220ENST00000556433 HAVCR1Q96D42 359 aa19.1■□□□□ 0.65
ACTN1-220ENST00000556433 RSRC1Q96IZ7 334 aaKnown RBP19.1■□□□□ 0.65
ACTN1-220ENST00000556433 SAMD8Q96LT4 415 aa19.1■□□□□ 0.65
ACTN1-220ENST00000556433 TMEM106BQ9NUM4 274 aa19.1■□□□□ 0.65
ACTN1-220ENST00000556433 VSX1Q9NZR4 365 aaPredicted RBP19.1■□□□□ 0.65
ACTN1-220ENST00000556433 ABCD2Q9UBJ2 740 aa19.1■□□□□ 0.65
ACTN1-220ENST00000556433 ASH2LQ9UBL3 628 aa19.1■□□□□ 0.65
ACTN1-220ENST00000556433 AURKCQ9UQB9 309 aa19.1■□□□□ 0.65
ACTN1-220ENST00000556433 ARHGAP32A7KAX9 2087 aa19.09■□□□□ 0.65
ACTN1-220ENST00000556433 TRBV4-1A0A0J9YWV2 114 aa19.09■□□□□ 0.65
ACTN1-220ENST00000556433 SOCS2O14508 198 aa19.09■□□□□ 0.65
ACTN1-220ENST00000556433 HILS1P60008 231 aa19.09■□□□□ 0.65
ACTN1-220ENST00000556433 DPY19L2P2Q6ZN68 376 aa19.09■□□□□ 0.65
ACTN1-220ENST00000556433 Q6ZR03 302 aa19.09■□□□□ 0.65
ACTN1-220ENST00000556433 USP43Q70EL4 1123 aa19.09■□□□□ 0.65
ACTN1-220ENST00000556433 OR1F12Q8NHA8 337 aa19.09■□□□□ 0.65
ACTN1-220ENST00000556433 PTP4A1Q93096 173 aa19.09■□□□□ 0.65
ACTN1-220ENST00000556433 CMTM5Q96DZ9 223 aa19.09■□□□□ 0.65
ACTN1-220ENST00000556433 COG8Q96MW5 612 aa19.09■□□□□ 0.65
ACTN1-220ENST00000556433 GPX7Q96SL4 187 aaPredicted RBP19.09■□□□□ 0.65
ACTN1-220ENST00000556433 NUAK2Q9H093 628 aa19.09■□□□□ 0.65
ACTN1-220ENST00000556433 UNC119BA6NIH7 251 aa19.08■□□□□ 0.64
ACTN1-220ENST00000556433 TRIM77I1YAP6 450 aa19.08■□□□□ 0.64
ACTN1-220ENST00000556433 GMNNO75496 209 aa19.08■□□□□ 0.64
ACTN1-220ENST00000556433 FOXH1O75593 365 aa19.08■□□□□ 0.64
ACTN1-220ENST00000556433 DIRAS1O95057 198 aa19.08■□□□□ 0.64
ACTN1-220ENST00000556433 IGHV2-70P01814 119 aa19.08■□□□□ 0.64
ACTN1-220ENST00000556433 TNFRSF1AP19438 455 aa19.08■□□□□ 0.64
ACTN1-220ENST00000556433 RBMXP38159 391 aaKnown RBP19.08■□□□□ 0.64
ACTN1-220ENST00000556433 ACTG1P63261 375 aa19.08■□□□□ 0.64
ACTN1-220ENST00000556433 KRT72Q14CN4 511 aa19.08■□□□□ 0.64
ACTN1-220ENST00000556433 SEC23BQ15437 767 aa19.08■□□□□ 0.64
ACTN1-220ENST00000556433 CCDC92Q53HC0 331 aaPredicted RBP19.08■□□□□ 0.64
ACTN1-220ENST00000556433 PTCHD4Q6ZW05 846 aa19.08■□□□□ 0.64
ACTN1-220ENST00000556433 ADCK1Q86TW2 530 aa19.08■□□□□ 0.64
ACTN1-220ENST00000556433 OR52J3Q8NH60 311 aa19.08■□□□□ 0.64
ACTN1-220ENST00000556433 C7orf34Q96L11 122 aa19.08■□□□□ 0.64
ACTN1-220ENST00000556433 JMJD8Q96S16 334 aa19.08■□□□□ 0.64
ACTN1-220ENST00000556433 ELAC2Q9BQ52 826 aaKnown RBP19.08■□□□□ 0.64
ACTN1-220ENST00000556433 KRCC1Q9NPI7 259 aaPredicted RBP19.08■□□□□ 0.64
ACTN1-220ENST00000556433 DCAF13Q9NV06 445 aaKnown RBP19.08■□□□□ 0.64
ACTN1-220ENST00000556433 ADA2Q9NZK5 511 aa19.08■□□□□ 0.64
ACTN1-220ENST00000556433 SAMD4AQ9UPU9 718 aaKnown RBP19.08■□□□□ 0.64
ACTN1-220ENST00000556433 OR6C6A6NF89 314 aa19.07■□□□□ 0.64
ACTN1-220ENST00000556433 RER1O15258 196 aa19.07■□□□□ 0.64
ACTN1-220ENST00000556433 ZFP36P26651 326 aaKnown RBP19.07■□□□□ 0.64
ACTN1-220ENST00000556433 CDKN2AP42771 156 aaKnown RBP19.07■□□□□ 0.64
ACTN1-220ENST00000556433 CENPAP49450 140 aa19.07■□□□□ 0.64
ACTN1-220ENST00000556433 RPS6KA3P51812 740 aa19.07■□□□□ 0.64
ACTN1-220ENST00000556433 FXYD6P3P58550 94 aa19.07■□□□□ 0.64
ACTN1-220ENST00000556433 ITLN1Q8WWA0 313 aa19.07■□□□□ 0.64
ACTN1-220ENST00000556433 SUCNR1Q9BXA5 334 aa19.07■□□□□ 0.64
ACTN1-220ENST00000556433 SPAG4Q9NPE6 437 aa19.07■□□□□ 0.64
ACTN1-220ENST00000556433 MED4Q9NPJ6 270 aa19.07■□□□□ 0.64
ACTN1-220ENST00000556433 IL19Q9UHD0 177 aa19.07■□□□□ 0.64
ACTN1-220ENST00000556433 OPN4Q9UHM6 478 aa19.07■□□□□ 0.64
ACTN1-220ENST00000556433 POLR1DQ9Y2S0 133 aa19.07■□□□□ 0.64
ACTN1-220ENST00000556433 SURF4O15260 269 aa19.06■□□□□ 0.64
ACTN1-220ENST00000556433 TXNDC12O95881 172 aa19.06■□□□□ 0.64
ACTN1-220ENST00000556433 DBHP09172 617 aa19.06■□□□□ 0.64
ACTN1-220ENST00000556433 RAC2P15153 192 aa19.06■□□□□ 0.64
ACTN1-220ENST00000556433 CFPP27918 469 aa19.06■□□□□ 0.64
ACTN1-220ENST00000556433 ERFP50548 548 aa19.06■□□□□ 0.64
ACTN1-220ENST00000556433 KCNMB1Q16558 191 aa19.06■□□□□ 0.64
ACTN1-220ENST00000556433 ZSCAN2Q7Z7L9 614 aaPredicted RBP19.06■□□□□ 0.64
ACTN1-220ENST00000556433 BPIFB2Q8N4F0 458 aa19.06■□□□□ 0.64
ACTN1-220ENST00000556433 SPICQ8N5J4 248 aa19.06■□□□□ 0.64
ACTN1-220ENST00000556433 RNF148Q8N7C7 305 aa19.06■□□□□ 0.64
ACTN1-220ENST00000556433 ZNF283Q8N7M2 679 aa19.06■□□□□ 0.64
ACTN1-220ENST00000556433 FAM86B1Q8N7N1 296 aa19.06■□□□□ 0.64
ACTN1-220ENST00000556433 FAM216AQ8WUB2 273 aa19.06■□□□□ 0.64
ACTN1-220ENST00000556433 TSSK2Q96PF2 358 aa19.06■□□□□ 0.64
ACTN1-220ENST00000556433 GPA33Q99795 319 aa19.06■□□□□ 0.64
ACTN1-220ENST00000556433 SLC6A7Q99884 636 aa19.06■□□□□ 0.64
ACTN1-220ENST00000556433 MYLK2Q9H1R3 596 aa19.06■□□□□ 0.64
ACTN1-220ENST00000556433 PPP1R3CQ9UQK1 317 aa19.06■□□□□ 0.64
ACTN1-220ENST00000556433 DYSFO75923 2080 aa19.05■□□□□ 0.64
ACTN1-220ENST00000556433 GPANK1O95872 356 aa19.05■□□□□ 0.64
ACTN1-220ENST00000556433 RGS6P49758 472 aa19.05■□□□□ 0.64
ACTN1-220ENST00000556433 TMEM155Q4W5P6 130 aa19.05■□□□□ 0.64
ACTN1-220ENST00000556433 SMARCD3Q6STE5 483 aa19.05■□□□□ 0.64
ACTN1-220ENST00000556433 LRRC28Q86X40 367 aaPredicted RBP19.05■□□□□ 0.64
ACTN1-220ENST00000556433 OR5AS1Q8N127 324 aa19.05■□□□□ 0.64
ACTN1-220ENST00000556433 KLHL36Q8N4N3 616 aa19.05■□□□□ 0.64
ACTN1-220ENST00000556433 ATG16L2Q8NAA4 619 aa19.05■□□□□ 0.64
ACTN1-220ENST00000556433 OR5L1Q8NGL2 311 aa19.05■□□□□ 0.64
ACTN1-220ENST00000556433 GCDHQ92947 438 aaPredicted RBP19.05■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms