RNA–Protein interactions for RNA: ENST00000556288.5

ATXN3-238, Transcript of ataxin 3, human

TSL 1 (best)

Gene ATXN3, Length 901 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ATXN3-238	ENST00000556288	MBOAT2	Q6ZWT7	520 aa		4.05	□□□□□ -1.76
ATXN3-238	ENST00000556288	ZSCAN2	Q7Z7L9	614 aa	Predicted RBP	4.05	□□□□□ -1.76
ATXN3-238	ENST00000556288	P2RY8	Q86VZ1	359 aa		4.05	□□□□□ -1.76
ATXN3-238	ENST00000556288	ZNF575	Q86XF7	245 aa		4.05	□□□□□ -1.76
ATXN3-238	ENST00000556288	RNF113B	Q8IZP6	322 aa	Known RBP	4.05	□□□□□ -1.76
ATXN3-238	ENST00000556288	OR1K1	Q8NGR3	316 aa		4.05	□□□□□ -1.76
ATXN3-238	ENST00000556288	OR13C2	Q8NGS9	318 aa		4.05	□□□□□ -1.76
ATXN3-238	ENST00000556288	OR6S1	Q8NH40	331 aa		4.05	□□□□□ -1.76
ATXN3-238	ENST00000556288	GNPDA2	Q8TDQ7	276 aa		4.05	□□□□□ -1.76
ATXN3-238	ENST00000556288	ACOT11	Q8WXI4	607 aa	Predicted RBP	4.05	□□□□□ -1.76
ATXN3-238	ENST00000556288	AKAP1	Q92667	903 aa	Known RBP eCLIP	4.05	□□□□□ -1.76
ATXN3-238	ENST00000556288	HTRA1	Q92743	480 aa		4.05	□□□□□ -1.76
ATXN3-238	ENST00000556288	NEUROG1	Q92886	237 aa		4.05	□□□□□ -1.76
ATXN3-238	ENST00000556288	MUL1	Q969V5	352 aa		4.05	□□□□□ -1.76
ATXN3-238	ENST00000556288	TMEM45B	Q96B21	275 aa		4.05	□□□□□ -1.76
ATXN3-238	ENST00000556288	OTULIN	Q96BN8	352 aa		4.05	□□□□□ -1.76
ATXN3-238	ENST00000556288	RSRC1	Q96IZ7	334 aa	Known RBP	4.05	□□□□□ -1.76
ATXN3-238	ENST00000556288	FOXN4	Q96NZ1	517 aa		4.05	□□□□□ -1.76
ATXN3-238	ENST00000556288	ALKBH3	Q96Q83	286 aa	Predicted RBP	4.05	□□□□□ -1.76
ATXN3-238	ENST00000556288	FYTTD1	Q96QD9	318 aa	Known RBP	4.05	□□□□□ -1.76
ATXN3-238	ENST00000556288	RBP7	Q96R05	134 aa		4.05	□□□□□ -1.76
ATXN3-238	ENST00000556288	OR2M2	Q96R28	347 aa		4.05	□□□□□ -1.76
ATXN3-238	ENST00000556288	ZNF347	Q96SE7	839 aa		4.05	□□□□□ -1.76
ATXN3-238	ENST00000556288	PIP5K1A	Q99755	562 aa		4.05	□□□□□ -1.76
ATXN3-238	ENST00000556288	IFT27	Q9BW83	186 aa		4.05	□□□□□ -1.76
ATXN3-238	ENST00000556288	ULBP2	Q9BZM5	246 aa		4.05	□□□□□ -1.76
ATXN3-238	ENST00000556288	SLC19A3	Q9BZV2	496 aa		4.05	□□□□□ -1.76
ATXN3-238	ENST00000556288	TRIM15	Q9C019	465 aa		4.05	□□□□□ -1.76
ATXN3-238	ENST00000556288	POLR2J2	Q9GZM3	115 aa	Known RBP	4.05	□□□□□ -1.76
ATXN3-238	ENST00000556288	NDEL1	Q9GZM8	345 aa		4.05	□□□□□ -1.76
ATXN3-238	ENST00000556288	POLR2J3	Q9H1A7	115 aa	Known RBP	4.05	□□□□□ -1.76
ATXN3-238	ENST00000556288	SLC17A5	Q9NRA2	495 aa		4.05	□□□□□ -1.76
ATXN3-238	ENST00000556288	CISD1	Q9NZ45	108 aa	Known RBP	4.05	□□□□□ -1.76
ATXN3-238	ENST00000556288	NDUFAF4	Q9P032	175 aa		4.05	□□□□□ -1.76
ATXN3-238	ENST00000556288	ACTR3B	Q9P1U1	418 aa		4.05	□□□□□ -1.76
ATXN3-238	ENST00000556288	ZNF346	Q9UL40	294 aa	Known RBP	4.05	□□□□□ -1.76
ATXN3-238	ENST00000556288	PRPF19	Q9UMS4	504 aa	Known RBP	4.05	□□□□□ -1.76
ATXN3-238	ENST00000556288	LAMP3	Q9UQV4	416 aa		4.05	□□□□□ -1.76
ATXN3-238	ENST00000556288	AMDHD2	Q9Y303	409 aa		4.05	□□□□□ -1.76
ATXN3-238	ENST00000556288	RNF115	Q9Y4L5	304 aa		4.05	□□□□□ -1.76
ATXN3-238	ENST00000556288	IER3IP1	Q9Y5U9	82 aa		4.05	□□□□□ -1.76
ATXN3-238	ENST00000556288		U3KQV3	271 aa		4.05	□□□□□ -1.76
ATXN3-238	ENST00000556288	PLCE1	Q9P212	2302 aa		4.05	□□□□□ -1.76
ATXN3-238	ENST00000556288	SPEN	Q96T58	3664 aa	Known RBP	4.05	□□□□□ -1.76
ATXN3-238	ENST00000556288	DCHS2	Q6V1P9	2916 aa		4.05	□□□□□ -1.76
ATXN3-238	ENST00000556288	ASH1L	Q9NR48	2969 aa	Known RBP	4.04	□□□□□ -1.76
ATXN3-238	ENST00000556288	TRBV4-1	A0A0J9YWV2	114 aa		4.04	□□□□□ -1.76
ATXN3-238	ENST00000556288	DEFB108A	A8MXU0	73 aa		4.04	□□□□□ -1.76
ATXN3-238	ENST00000556288		H7C1C5	153 aa		4.04	□□□□□ -1.76
ATXN3-238	ENST00000556288	SOCS2	O14508	198 aa		4.04	□□□□□ -1.76
ATXN3-238	ENST00000556288	SMPD2	O60906	423 aa		4.04	□□□□□ -1.76
ATXN3-238	ENST00000556288	E2F6	O75461	281 aa		4.04	□□□□□ -1.76
ATXN3-238	ENST00000556288	TRMU	O75648	421 aa	Known RBP	4.04	□□□□□ -1.76
ATXN3-238	ENST00000556288	CIB2	O75838	187 aa		4.04	□□□□□ -1.76
ATXN3-238	ENST00000556288	CCNB2	O95067	398 aa		4.04	□□□□□ -1.76
ATXN3-238	ENST00000556288	FARS2	O95363	451 aa	Known RBP	4.04	□□□□□ -1.76
ATXN3-238	ENST00000556288	CST1	P01037	141 aa		4.04	□□□□□ -1.76
ATXN3-238	ENST00000556288	IGHG1	P01857	330 aa		4.04	□□□□□ -1.76
ATXN3-238	ENST00000556288	HLA-H	P01893	362 aa		4.04	□□□□□ -1.76
ATXN3-238	ENST00000556288	CRYAA	P02489	173 aa		4.04	□□□□□ -1.76
ATXN3-238	ENST00000556288	RAF1	P04049	648 aa		4.04	□□□□□ -1.76
ATXN3-238	ENST00000556288	ASAH2B	P0C7U1	165 aa		4.04	□□□□□ -1.76
ATXN3-238	ENST00000556288	B4GALT1	P15291	398 aa		4.04	□□□□□ -1.76
ATXN3-238	ENST00000556288	POU1F1	P28069	291 aa		4.04	□□□□□ -1.76
ATXN3-238	ENST00000556288	CDA	P32320	146 aa		4.04	□□□□□ -1.76
ATXN3-238	ENST00000556288	IFNGR2	P38484	337 aa		4.04	□□□□□ -1.76
ATXN3-238	ENST00000556288	DAP3	P51398	398 aa	Known RBP	4.04	□□□□□ -1.76
ATXN3-238	ENST00000556288	IDH3G	P51553	393 aa	Predicted RBP	4.04	□□□□□ -1.76
ATXN3-238	ENST00000556288	P2RY4	P51582	365 aa		4.04	□□□□□ -1.76
ATXN3-238	ENST00000556288	NR1H2	P55055	460 aa		4.04	□□□□□ -1.76
ATXN3-238	ENST00000556288	RPL27	P61353	136 aa	Known RBP	4.04	□□□□□ -1.76
ATXN3-238	ENST00000556288	LCN6	P62502	163 aa		4.04	□□□□□ -1.76
ATXN3-238	ENST00000556288	CFHR3	Q02985	330 aa		4.04	□□□□□ -1.76
ATXN3-238	ENST00000556288	SRSF4	Q08170	494 aa	Known RBP	4.04	□□□□□ -1.76
ATXN3-238	ENST00000556288	ZP4	Q12836	540 aa		4.04	□□□□□ -1.76
ATXN3-238	ENST00000556288	TRAP1	Q12931	704 aa	Known RBP	4.04	□□□□□ -1.76
ATXN3-238	ENST00000556288	FLOT2	Q14254	428 aa		4.04	□□□□□ -1.76
ATXN3-238	ENST00000556288	SEC23B	Q15437	767 aa		4.04	□□□□□ -1.76
ATXN3-238	ENST00000556288	ACKR1	Q16570	336 aa		4.04	□□□□□ -1.76
ATXN3-238	ENST00000556288	TBRG1	Q3YBR2	411 aa		4.04	□□□□□ -1.76
ATXN3-238	ENST00000556288	C4orf46	Q504U0	113 aa		4.04	□□□□□ -1.76
ATXN3-238	ENST00000556288	NCMAP	Q5T1S8	102 aa		4.04	□□□□□ -1.76
ATXN3-238	ENST00000556288	TMEM53	Q6P2H8	277 aa		4.04	□□□□□ -1.76
ATXN3-238	ENST00000556288	SMARCD3	Q6STE5	483 aa		4.04	□□□□□ -1.76
ATXN3-238	ENST00000556288	DCDC5	Q6ZRR9	648 aa		4.04	□□□□□ -1.76
ATXN3-238	ENST00000556288	LINGO2	Q7L985	606 aa		4.04	□□□□□ -1.76
ATXN3-238	ENST00000556288	SLC46A3	Q7Z3Q1	461 aa		4.04	□□□□□ -1.76
ATXN3-238	ENST00000556288	C20orf196	Q8IYI0	205 aa		4.04	□□□□□ -1.76
ATXN3-238	ENST00000556288	OFCC1	Q8IZS5	231 aa		4.04	□□□□□ -1.76
ATXN3-238	ENST00000556288	FBXL14	Q8N1E6	418 aa		4.04	□□□□□ -1.76
ATXN3-238	ENST00000556288	ARHGAP24	Q8N264	748 aa		4.04	□□□□□ -1.76
ATXN3-238	ENST00000556288	WDR31	Q8NA23	367 aa		4.04	□□□□□ -1.76
ATXN3-238	ENST00000556288	ICA1L	Q8NDH6	482 aa		4.04	□□□□□ -1.76
ATXN3-238	ENST00000556288	KBTBD8	Q8NFY9	601 aa		4.04	□□□□□ -1.76
ATXN3-238	ENST00000556288	OR4K5	Q8NGD3	323 aa		4.04	□□□□□ -1.76
ATXN3-238	ENST00000556288	OR6X1	Q8NH79	312 aa		4.04	□□□□□ -1.76
ATXN3-238	ENST00000556288	SLC7A13	Q8TCU3	470 aa		4.04	□□□□□ -1.76
ATXN3-238	ENST00000556288	DDB2	Q92466	427 aa		4.04	□□□□□ -1.76
ATXN3-238	ENST00000556288	BCL2L2	Q92843	193 aa	Predicted RBP	4.04	□□□□□ -1.76
ATXN3-238	ENST00000556288	MCHR2	Q969V1	340 aa		4.04	□□□□□ -1.76

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