RNA–Protein interactions for RNA: ENST00000555541.1

SNX6-204, Transcript of sorting nexin 6, humanhuman

TSL 5

Gene SNX6, Length 339 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6-204ENST00000555541 CCNG1P51959 295 aa1.09□□□□□ -2.23
SNX6-204ENST00000555541 RCAN2Q14206 197 aa1.09□□□□□ -2.23
SNX6-204ENST00000555541 TCEAL5Q5H9L2 206 aa1.09□□□□□ -2.23
SNX6-204ENST00000555541 TEX30Q5JUR7 227 aa1.09□□□□□ -2.23
SNX6-204ENST00000555541 EFL1Q7Z2Z2 1120 aaKnown RBP1.09□□□□□ -2.23
SNX6-204ENST00000555541 OR4F6Q8NGB9 312 aa1.09□□□□□ -2.23
SNX6-204ENST00000555541 PIBF1Q8WXW3 757 aa1.09□□□□□ -2.23
SNX6-204ENST00000555541 TCEAL3Q969E4 200 aa1.09□□□□□ -2.23
SNX6-204ENST00000555541 ZBED3Q96IU2 234 aaPredicted RBP1.09□□□□□ -2.23
SNX6-204ENST00000555541 C12orf42Q96LP6 360 aa1.09□□□□□ -2.23
SNX6-204ENST00000555541 ZFP3Q96NJ6 502 aa1.09□□□□□ -2.23
SNX6-204ENST00000555541 PKMYT1Q99640 499 aa1.09□□□□□ -2.23
SNX6-204ENST00000555541 TMEM43Q9BTV4 400 aa1.09□□□□□ -2.23
SNX6-204ENST00000555541 GGTLC1Q9BX51 225 aa1.09□□□□□ -2.23
SNX6-204ENST00000555541 TRMT112Q9UI30 125 aaKnown RBP1.09□□□□□ -2.23
SNX6-204ENST00000555541 MRPS7Q9Y2R9 242 aaKnown RBP1.09□□□□□ -2.23
SNX6-204ENST00000555541 CNTNAP1P78357 1384 aa1.08□□□□□ -2.24
SNX6-204ENST00000555541 IGLV1-36A0A0B4J1U3 117 aa1.08□□□□□ -2.24
SNX6-204ENST00000555541 A0A1W2PPE3 182 aa1.08□□□□□ -2.24
SNX6-204ENST00000555541 C4orf51C9J302 202 aa1.08□□□□□ -2.24
SNX6-204ENST00000555541 HAS3O00219 553 aa1.08□□□□□ -2.24
SNX6-204ENST00000555541 MANBAO00462 879 aa1.08□□□□□ -2.24
SNX6-204ENST00000555541 PSTPIP1O43586 416 aa1.08□□□□□ -2.24
SNX6-204ENST00000555541 TIMM8AO60220 97 aaPredicted RBP1.08□□□□□ -2.24
SNX6-204ENST00000555541 SNNO75324 88 aaPredicted RBP1.08□□□□□ -2.24
SNX6-204ENST00000555541 TSPAN12O95859 305 aa1.08□□□□□ -2.24
SNX6-204ENST00000555541 IGHV3-11P01762 117 aa1.08□□□□□ -2.24
SNX6-204ENST00000555541 P2RX1P51575 399 aa1.08□□□□□ -2.24
SNX6-204ENST00000555541 CDKN2DP55273 166 aa1.08□□□□□ -2.24
SNX6-204ENST00000555541 PRMT2P55345 433 aa1.08□□□□□ -2.24
SNX6-204ENST00000555541 USP50Q70EL3 339 aaPredicted RBP1.08□□□□□ -2.24
SNX6-204ENST00000555541 H2BFWTQ7Z2G1 175 aa1.08□□□□□ -2.24
SNX6-204ENST00000555541 ZSCAN30Q86W11 494 aa1.08□□□□□ -2.24
SNX6-204ENST00000555541 EID2Q8N6I1 236 aa1.08□□□□□ -2.24
SNX6-204ENST00000555541 TCEANC2Q96MN5 208 aa1.08□□□□□ -2.24
SNX6-204ENST00000555541 LIN28AQ9H9Z2 209 aaKnown RBP1.08□□□□□ -2.24
SNX6-204ENST00000555541 NACADO15069 1562 aa1.08□□□□□ -2.24
SNX6-204ENST00000555541 DENND4AQ7Z401 1863 aa1.07□□□□□ -2.24
SNX6-204ENST00000555541 IGHV3-49A0A0A0MS15 119 aa1.07□□□□□ -2.24
SNX6-204ENST00000555541 A0A1B0GVL5 298 aa1.07□□□□□ -2.24
SNX6-204ENST00000555541 SNTNA6NMZ2 147 aa1.07□□□□□ -2.24
SNX6-204ENST00000555541 CEACAM18A8MTB9 384 aa1.07□□□□□ -2.24
SNX6-204ENST00000555541 L7N2F9 121 aa1.07□□□□□ -2.24
SNX6-204ENST00000555541 CNMDO75829 334 aa1.07□□□□□ -2.24
SNX6-204ENST00000555541 TMEM50AO95807 157 aa1.07□□□□□ -2.24
SNX6-204ENST00000555541 HEXBP07686 556 aa1.07□□□□□ -2.24
SNX6-204ENST00000555541 PFN1P07737 140 aaKnown RBP1.07□□□□□ -2.24
SNX6-204ENST00000555541 INAFM2P0DMQ5 153 aa1.07□□□□□ -2.24
SNX6-204ENST00000555541 MPV17P39210 176 aa1.07□□□□□ -2.24
SNX6-204ENST00000555541 SSR4P51571 173 aa1.07□□□□□ -2.24
SNX6-204ENST00000555541 RND2P52198 227 aa1.07□□□□□ -2.24
SNX6-204ENST00000555541 GFERP55789 205 aa1.07□□□□□ -2.24
SNX6-204ENST00000555541 SYNJ2BPP57105 145 aa1.07□□□□□ -2.24
SNX6-204ENST00000555541 YWHAGP61981 247 aaKnown RBP eCLIP1.07□□□□□ -2.24
SNX6-204ENST00000555541 SLC25A11Q02978 314 aaKnown RBP1.07□□□□□ -2.24
SNX6-204ENST00000555541 H3F3CQ6NXT2 135 aa1.07□□□□□ -2.24
SNX6-204ENST00000555541 CCDC73Q6ZRK6 1079 aa1.07□□□□□ -2.24
SNX6-204ENST00000555541 FAM9BQ8IZU0 186 aa1.07□□□□□ -2.24
SNX6-204ENST00000555541 OR5T1Q8NG75 326 aa1.07□□□□□ -2.24
SNX6-204ENST00000555541 OR1L4Q8NGR5 311 aa1.07□□□□□ -2.24
SNX6-204ENST00000555541 CHCHD7Q9BUK0 85 aa1.07□□□□□ -2.24
SNX6-204ENST00000555541 C1orf50Q9BV19 199 aa1.07□□□□□ -2.24
SNX6-204ENST00000555541 NPTNQ9Y639 398 aa1.07□□□□□ -2.24
SNX6-204ENST00000555541 PALLDQ8WX93 1383 aa1.07□□□□□ -2.24
SNX6-204ENST00000555541 OR5H1A6NKK0 313 aa1.06□□□□□ -2.24
SNX6-204ENST00000555541 KRBOX1C9JBD0 128 aa1.06□□□□□ -2.24
SNX6-204ENST00000555541 MFNGO00587 321 aa1.06□□□□□ -2.24
SNX6-204ENST00000555541 PPP1R2P9O14990 202 aa1.06□□□□□ -2.24
SNX6-204ENST00000555541 EIF1BO60739 113 aaKnown RBP1.06□□□□□ -2.24
SNX6-204ENST00000555541 PEX11AO75192 247 aa1.06□□□□□ -2.24
SNX6-204ENST00000555541 EEDO75530 441 aaKnown RBP1.06□□□□□ -2.24
SNX6-204ENST00000555541 SURF6O75683 361 aaKnown RBP1.06□□□□□ -2.24
SNX6-204ENST00000555541 SEMA3DO95025 777 aa1.06□□□□□ -2.24
SNX6-204ENST00000555541 ZNF35P13682 527 aa1.06□□□□□ -2.24
SNX6-204ENST00000555541 ATP1B2P14415 290 aaPredicted RBP1.06□□□□□ -2.24
SNX6-204ENST00000555541 NTF3P20783 257 aa1.06□□□□□ -2.24
SNX6-204ENST00000555541 EIF1P41567 113 aaKnown RBP1.06□□□□□ -2.24
SNX6-204ENST00000555541 VSX2P58304 361 aaPredicted RBP1.06□□□□□ -2.24
SNX6-204ENST00000555541 MRPS22P82650 360 aaKnown RBP1.06□□□□□ -2.24
SNX6-204ENST00000555541 QPRTQ15274 297 aa1.06□□□□□ -2.24
SNX6-204ENST00000555541 YIF1BQ5BJH7 314 aa1.06□□□□□ -2.24
SNX6-204ENST00000555541 ANKRD26P1Q6NSI1 321 aa1.06□□□□□ -2.24
SNX6-204ENST00000555541 SGPP2Q8IWX5 399 aa1.06□□□□□ -2.24
SNX6-204ENST00000555541 COX18Q8N8Q8 333 aa1.06□□□□□ -2.24
SNX6-204ENST00000555541 ZFP41Q8N8Y5 198 aa1.06□□□□□ -2.24
SNX6-204ENST00000555541 OR1S2Q8NGQ3 325 aa1.06□□□□□ -2.24
SNX6-204ENST00000555541 OR1L6Q8NGR2 347 aa1.06□□□□□ -2.24
SNX6-204ENST00000555541 SEC22CQ9BRL7 303 aa1.06□□□□□ -2.24
SNX6-204ENST00000555541 EDA2RQ9HAV5 297 aa1.06□□□□□ -2.24
SNX6-204ENST00000555541 NT5MQ9NPB1 228 aa1.06□□□□□ -2.24
SNX6-204ENST00000555541 ETNK2Q9NVF9 386 aa1.06□□□□□ -2.24
SNX6-204ENST00000555541 HPF1Q9NWY4 346 aa1.06□□□□□ -2.24
SNX6-204ENST00000555541 SLC7A8Q9UHI5 535 aa1.06□□□□□ -2.24
SNX6-204ENST00000555541 SH3BGRL2Q9UJC5 107 aa1.06□□□□□ -2.24
SNX6-204ENST00000555541 SNX6Q9UNH7 406 aa1.06□□□□□ -2.24
SNX6-204ENST00000555541 GOLT1BQ9Y3E0 138 aa1.06□□□□□ -2.24
SNX6-204ENST00000555541 BAZ2AQ9UIF9 1905 aaKnown RBP1.05□□□□□ -2.24
SNX6-204ENST00000555541 CDC7O00311 574 aa1.05□□□□□ -2.24
SNX6-204ENST00000555541 MAGEB3O15480 346 aa1.05□□□□□ -2.24
SNX6-204ENST00000555541 GLSO94925 669 aaPredicted RBP1.05□□□□□ -2.24
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms