RNA–Protein interactions for RNA: ENST00000555535.1

SRP54-207, Transcript of signal recognition particle 54, humanhuman

TSL 4

Gene SRP54, Length 552 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-207ENST00000555535 GPX6P59796 221 aa0.75□□□□□ -2.29
SRP54-207ENST00000555535 ADARB1P78563 741 aaKnown RBP0.75□□□□□ -2.29
SRP54-207ENST00000555535 MRPS22P82650 360 aaKnown RBP0.75□□□□□ -2.29
SRP54-207ENST00000555535 BST1Q10588 318 aa0.75□□□□□ -2.29
SRP54-207ENST00000555535 DGCR6Q14129 220 aa0.75□□□□□ -2.29
SRP54-207ENST00000555535 DMC1Q14565 340 aa0.75□□□□□ -2.29
SRP54-207ENST00000555535 PDK3Q15120 406 aa0.75□□□□□ -2.29
SRP54-207ENST00000555535 ZNF77Q15935 545 aa0.75□□□□□ -2.29
SRP54-207ENST00000555535 MPV17L2Q567V2 206 aa0.75□□□□□ -2.29
SRP54-207ENST00000555535 THEM4Q5T1C6 240 aa0.75□□□□□ -2.29
SRP54-207ENST00000555535 AP1ARQ63HQ0 302 aa0.75□□□□□ -2.29
SRP54-207ENST00000555535 NBPF5PQ86XG9 351 aaPredicted RBP0.75□□□□□ -2.29
SRP54-207ENST00000555535 TGIF2LXQ8IUE1 241 aa0.75□□□□□ -2.29
SRP54-207ENST00000555535 PDIK1LQ8N165 341 aa0.75□□□□□ -2.29
SRP54-207ENST00000555535 LIX1Q8N485 282 aa0.75□□□□□ -2.29
SRP54-207ENST00000555535 ZNF645Q8N7E2 425 aa0.75□□□□□ -2.29
SRP54-207ENST00000555535 GPR26Q8NDV2 337 aa0.75□□□□□ -2.29
SRP54-207ENST00000555535 BHLHE23Q8NDY6 225 aa0.75□□□□□ -2.29
SRP54-207ENST00000555535 Q8NDZ9 215 aa0.75□□□□□ -2.29
SRP54-207ENST00000555535 OR10R2Q8NGX6 335 aa0.75□□□□□ -2.29
SRP54-207ENST00000555535 OR10J6PQ8NGY7 276 aa0.75□□□□□ -2.29
SRP54-207ENST00000555535 KIFAP3Q92845 792 aa0.75□□□□□ -2.29
SRP54-207ENST00000555535 CCDC126Q96EE4 140 aa0.75□□□□□ -2.29
SRP54-207ENST00000555535 HSD17B10Q99714 261 aaKnown RBP0.75□□□□□ -2.29
SRP54-207ENST00000555535 ATP5SQ99766 215 aa0.75□□□□□ -2.29
SRP54-207ENST00000555535 SLC29A1Q99808 456 aa0.75□□□□□ -2.29
SRP54-207ENST00000555535 KCTD14Q9BQ13 255 aaPredicted RBP0.75□□□□□ -2.29
SRP54-207ENST00000555535 TBL1YQ9BQ87 522 aa0.75□□□□□ -2.29
SRP54-207ENST00000555535 OR52D1Q9H346 318 aa0.75□□□□□ -2.29
SRP54-207ENST00000555535 SAV1Q9H4B6 383 aaPredicted RBP0.75□□□□□ -2.29
SRP54-207ENST00000555535 UBE2ZQ9H832 354 aaPredicted RBP0.75□□□□□ -2.29
SRP54-207ENST00000555535 BEX1Q9HBH7 125 aa0.75□□□□□ -2.29
SRP54-207ENST00000555535 SGK2Q9HBY8 427 aa0.75□□□□□ -2.29
SRP54-207ENST00000555535 FGF20Q9NP95 211 aaPredicted RBP0.75□□□□□ -2.29
SRP54-207ENST00000555535 SUN2Q9UH99 717 aa0.75□□□□□ -2.29
SRP54-207ENST00000555535 IKZF2Q9UKS7 526 aa0.75□□□□□ -2.29
SRP54-207ENST00000555535 HYOU1Q9Y4L1 999 aa0.75□□□□□ -2.29
SRP54-207ENST00000555535 PEX16Q9Y5Y5 336 aa0.75□□□□□ -2.29
SRP54-207ENST00000555535 MIA3Q5JRA6 1907 aa0.75□□□□□ -2.29
SRP54-207ENST00000555535 AK9Q5TCS8 1911 aa0.75□□□□□ -2.29
SRP54-207ENST00000555535 DYSFO75923 2080 aa0.74□□□□□ -2.29
SRP54-207ENST00000555535 TMEM131Q92545 1883 aa0.74□□□□□ -2.29
SRP54-207ENST00000555535 TRAV39A0A0B4J263 110 aa0.74□□□□□ -2.29
SRP54-207ENST00000555535 GLYATL1P3A0A0U1RQE8 302 aa0.74□□□□□ -2.29
SRP54-207ENST00000555535 A0A1W2PPV9 198 aa0.74□□□□□ -2.29
SRP54-207ENST00000555535 FAM47DPA6NHR8 397 aa0.74□□□□□ -2.29
SRP54-207ENST00000555535 H0YJW9 148 aa0.74□□□□□ -2.29
SRP54-207ENST00000555535 H7C417 338 aa0.74□□□□□ -2.29
SRP54-207ENST00000555535 CDC7O00311 574 aa0.74□□□□□ -2.29
SRP54-207ENST00000555535 CHST10O43529 356 aa0.74□□□□□ -2.29
SRP54-207ENST00000555535 EEDO75530 441 aaKnown RBP0.74□□□□□ -2.29
SRP54-207ENST00000555535 REM1O75628 298 aa0.74□□□□□ -2.29
SRP54-207ENST00000555535 YIF1AO95070 293 aa0.74□□□□□ -2.29
SRP54-207ENST00000555535 NDUFB10O96000 172 aa0.74□□□□□ -2.29
SRP54-207ENST00000555535 IGLV3-25P01717 112 aa0.74□□□□□ -2.29
SRP54-207ENST00000555535 SERPINA5P05154 406 aa0.74□□□□□ -2.29
SRP54-207ENST00000555535 ZNF688P0C7X2 276 aa0.74□□□□□ -2.29
SRP54-207ENST00000555535 TNNI1P19237 187 aa0.74□□□□□ -2.29
SRP54-207ENST00000555535 KITLGP21583 273 aa0.74□□□□□ -2.29
SRP54-207ENST00000555535 F2RP25116 425 aa0.74□□□□□ -2.29
SRP54-207ENST00000555535 LOXP28300 417 aaPredicted RBP0.74□□□□□ -2.29
SRP54-207ENST00000555535 YAP1P46937 504 aaKnown RBP0.74□□□□□ -2.29
SRP54-207ENST00000555535 HCAR3P49019 387 aa0.74□□□□□ -2.29
SRP54-207ENST00000555535 CSNK1EP49674 416 aaKnown RBP0.74□□□□□ -2.29
SRP54-207ENST00000555535 CEBPDP49716 269 aaPredicted RBP0.74□□□□□ -2.29
SRP54-207ENST00000555535 RAB7AP51149 207 aa0.74□□□□□ -2.29
SRP54-207ENST00000555535 RPS11P62280 158 aaKnown RBP eCLIP0.74□□□□□ -2.29
SRP54-207ENST00000555535 CDK5Q00535 292 aa0.74□□□□□ -2.29
SRP54-207ENST00000555535 SLC25A11Q02978 314 aaKnown RBP0.74□□□□□ -2.29
SRP54-207ENST00000555535 TNFRSF9Q07011 255 aa0.74□□□□□ -2.29
SRP54-207ENST00000555535 ZNF235Q14590 738 aa0.74□□□□□ -2.29
SRP54-207ENST00000555535 ZMYND11Q15326 602 aa0.74□□□□□ -2.29
SRP54-207ENST00000555535 ANKDD1AQ495B1 522 aa0.74□□□□□ -2.29
SRP54-207ENST00000555535 PPM1LQ5SGD2 360 aa0.74□□□□□ -2.29
SRP54-207ENST00000555535 GPR107Q5VW38 600 aa0.74□□□□□ -2.29
SRP54-207ENST00000555535 ADNP2Q6IQ32 1131 aa0.74□□□□□ -2.29
SRP54-207ENST00000555535 SPINT4Q6UDR6 99 aa0.74□□□□□ -2.29
SRP54-207ENST00000555535 KDELC1Q6UW63 502 aa0.74□□□□□ -2.29
SRP54-207ENST00000555535 MBOAT1Q6ZNC8 495 aa0.74□□□□□ -2.29
SRP54-207ENST00000555535 RGS9BPQ6ZS82 235 aa0.74□□□□□ -2.29
SRP54-207ENST00000555535 H2BFWTQ7Z2G1 175 aa0.74□□□□□ -2.29
SRP54-207ENST00000555535 PEX26Q7Z412 305 aa0.74□□□□□ -2.29
SRP54-207ENST00000555535 NKAIN4Q8IVV8 208 aa0.74□□□□□ -2.29
SRP54-207ENST00000555535 UBE2J2Q8N2K1 259 aa0.74□□□□□ -2.29
SRP54-207ENST00000555535 MS4A15Q8N5U1 240 aa0.74□□□□□ -2.29
SRP54-207ENST00000555535 TMEM105Q8N8V8 129 aa0.74□□□□□ -2.29
SRP54-207ENST00000555535 EIF1ADQ8N9N8 165 aaKnown RBP0.74□□□□□ -2.29
SRP54-207ENST00000555535 SNX31Q8N9S9 440 aa0.74□□□□□ -2.29
SRP54-207ENST00000555535 NOXO1Q8NFA2 376 aa0.74□□□□□ -2.29
SRP54-207ENST00000555535 TTLQ8NG68 377 aa0.74□□□□□ -2.29
SRP54-207ENST00000555535 OR2L3Q8NG85 312 aa0.74□□□□□ -2.29
SRP54-207ENST00000555535 OR10AD1Q8NGE0 317 aa0.74□□□□□ -2.29
SRP54-207ENST00000555535 OR52M1Q8NGK5 317 aa0.74□□□□□ -2.29
SRP54-207ENST00000555535 OR5M1Q8NGP8 315 aa0.74□□□□□ -2.29
SRP54-207ENST00000555535 OR9A2Q8NGT5 310 aa0.74□□□□□ -2.29
SRP54-207ENST00000555535 LKAAEAR1Q8TD35 194 aa0.74□□□□□ -2.29
SRP54-207ENST00000555535 PTX4Q96A99 478 aa0.74□□□□□ -2.29
SRP54-207ENST00000555535 NTAN1Q96AB6 310 aa0.74□□□□□ -2.29
SRP54-207ENST00000555535 SLC25A46Q96AG3 418 aa0.74□□□□□ -2.29
SRP54-207ENST00000555535 WDR34Q96EX3 536 aa0.74□□□□□ -2.29
Retrieved 100 of 20,778 RNA–protein pairs in 56.1 ms