RNA–Protein interactions for RNA: ENST00000555301.1

CHD8-208, Transcript of chromodomain helicase DNA binding protein 8, humanhuman

TSL 2

Gene CHD8, Length 918 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8-208ENST00000555301 CDK5R2Q13319 367 aa12.39□□□□□ -0.43
CHD8-208ENST00000555301 TMEM154Q6P9G4 183 aa12.39□□□□□ -0.43
CHD8-208ENST00000555301 CFAP77Q6ZQR2 320 aa12.39□□□□□ -0.43
CHD8-208ENST00000555301 MYPOPQ86VE0 399 aaPredicted RBP12.39□□□□□ -0.43
CHD8-208ENST00000555301 CDC20BQ86Y33 519 aa12.39□□□□□ -0.43
CHD8-208ENST00000555301 CNIH3Q8TBE1 160 aa12.39□□□□□ -0.43
CHD8-208ENST00000555301 ST7LQ8TDW4 575 aa12.39□□□□□ -0.43
CHD8-208ENST00000555301 FBLIM1Q8WUP2 373 aa12.39□□□□□ -0.43
CHD8-208ENST00000555301 IPCEF1Q8WWN9 437 aaPredicted RBP12.39□□□□□ -0.43
CHD8-208ENST00000555301 MARVELD3Q96A59 401 aa12.39□□□□□ -0.43
CHD8-208ENST00000555301 RNFT2Q96EX2 444 aa12.39□□□□□ -0.43
CHD8-208ENST00000555301 MAP6Q96JE9 813 aa12.39□□□□□ -0.43
CHD8-208ENST00000555301 POM121L2Q96KW2 1035 aa12.39□□□□□ -0.43
CHD8-208ENST00000555301 ATF6BQ99941 703 aa12.39□□□□□ -0.43
CHD8-208ENST00000555301 TMEM204Q9BSN7 226 aa12.39□□□□□ -0.43
CHD8-208ENST00000555301 CDH20Q9HBT6 801 aa12.39□□□□□ -0.43
CHD8-208ENST00000555301 PCDHGB1Q9Y5G3 927 aa12.39□□□□□ -0.43
CHD8-208ENST00000555301 IGHV2OR16-5A0A0B4J2B6 119 aa12.38□□□□□ -0.43
CHD8-208ENST00000555301 C5orf49A4QMS7 147 aa12.38□□□□□ -0.43
CHD8-208ENST00000555301 ZNF878C9JN71 531 aa12.38□□□□□ -0.43
CHD8-208ENST00000555301 CTAG2O75638 210 aa12.38□□□□□ -0.43
CHD8-208ENST00000555301 OR2T7P0C7T2 308 aa12.38□□□□□ -0.43
CHD8-208ENST00000555301 DBTP11182 482 aaKnown RBP12.38□□□□□ -0.43
CHD8-208ENST00000555301 PSKH1P11801 424 aa12.38□□□□□ -0.43
CHD8-208ENST00000555301 ZNF35P13682 527 aa12.38□□□□□ -0.43
CHD8-208ENST00000555301 ALOX5APP20292 161 aa12.38□□□□□ -0.43
CHD8-208ENST00000555301 SLC15A1P46059 708 aa12.38□□□□□ -0.43
CHD8-208ENST00000555301 ACTC1P68032 377 aa12.38□□□□□ -0.43
CHD8-208ENST00000555301 ACTA1P68133 377 aa12.38□□□□□ -0.43
CHD8-208ENST00000555301 GALK2Q01415 458 aa12.38□□□□□ -0.43
CHD8-208ENST00000555301 RAB40BQ12829 278 aa12.38□□□□□ -0.43
CHD8-208ENST00000555301 KLHL22Q53GT1 634 aa12.38□□□□□ -0.43
CHD8-208ENST00000555301 KCTD18Q6PI47 426 aaPredicted RBP12.38□□□□□ -0.43
CHD8-208ENST00000555301 ARL9Q6T311 187 aa12.38□□□□□ -0.43
CHD8-208ENST00000555301 SLC22A25Q6T423 547 aa12.38□□□□□ -0.43
CHD8-208ENST00000555301 UNQ6126/PRO20091Q6UXV3 157 aa12.38□□□□□ -0.43
CHD8-208ENST00000555301 SLC35F2Q8IXU6 374 aa12.38□□□□□ -0.43
CHD8-208ENST00000555301 ZNF295-AS1Q8N0V1 137 aa12.38□□□□□ -0.43
CHD8-208ENST00000555301 OR4F15Q8NGB8 312 aa12.38□□□□□ -0.43
CHD8-208ENST00000555301 OR2T27Q8NH04 317 aa12.38□□□□□ -0.43
CHD8-208ENST00000555301 THEM6Q8WUY1 208 aa12.38□□□□□ -0.43
CHD8-208ENST00000555301 RNF133Q8WVZ7 376 aa12.38□□□□□ -0.43
CHD8-208ENST00000555301 ASB17Q8WXJ9 295 aa12.38□□□□□ -0.43
CHD8-208ENST00000555301 SLAMF6Q96DU3 332 aa12.38□□□□□ -0.43
CHD8-208ENST00000555301 DCLRE1CQ96SD1 692 aaKnown RBP12.38□□□□□ -0.43
CHD8-208ENST00000555301 ABHD6Q9BV23 337 aa12.38□□□□□ -0.43
CHD8-208ENST00000555301 PNRC2Q9NPJ4 139 aaKnown RBP12.38□□□□□ -0.43
CHD8-208ENST00000555301 DDX28Q9NUL7 540 aaKnown RBP12.38□□□□□ -0.43
CHD8-208ENST00000555301 MRPS18AQ9NVS2 196 aaKnown RBP12.38□□□□□ -0.43
CHD8-208ENST00000555301 SPEF1Q9Y4P9 236 aa12.38□□□□□ -0.43
CHD8-208ENST00000555301 USP9YO00507 2555 aaPredicted RBP12.37□□□□□ -0.43
CHD8-208ENST00000555301 LOC100509620A0A075B734 347 aa12.37□□□□□ -0.43
CHD8-208ENST00000555301 IRGMA1A4Y4 181 aa12.37□□□□□ -0.43
CHD8-208ENST00000555301 ZNF670-ZNF695F2Z2N8 137 aa12.37□□□□□ -0.43
CHD8-208ENST00000555301 FADS2O95864 444 aaKnown RBP12.37□□□□□ -0.43
CHD8-208ENST00000555301 CCNOP22674 350 aa12.37□□□□□ -0.43
CHD8-208ENST00000555301 CALCRP30988 508 aa12.37□□□□□ -0.43
CHD8-208ENST00000555301 GRB2P62993 217 aaKnown RBP12.37□□□□□ -0.43
CHD8-208ENST00000555301 CSNK2BP67870 215 aa12.37□□□□□ -0.43
CHD8-208ENST00000555301 TLE4Q04727 773 aa12.37□□□□□ -0.43
CHD8-208ENST00000555301 TAF13Q15543 124 aa12.37□□□□□ -0.43
CHD8-208ENST00000555301 SMN1Q16637 294 aaKnown RBP12.37□□□□□ -0.43
CHD8-208ENST00000555301 ADAM5Q6NVV9 412 aa12.37□□□□□ -0.43
CHD8-208ENST00000555301 ZNF704Q6ZNC4 412 aaPredicted RBP12.37□□□□□ -0.43
CHD8-208ENST00000555301 SPTSSAQ969W0 71 aa12.37□□□□□ -0.43
CHD8-208ENST00000555301 HS3ST6Q96QI5 342 aa12.37□□□□□ -0.43
CHD8-208ENST00000555301 COPS4Q9BT78 406 aa12.37□□□□□ -0.43
CHD8-208ENST00000555301 CLEC4MQ9H2X3 399 aaPredicted RBP12.37□□□□□ -0.43
CHD8-208ENST00000555301 AMBNQ9NP70 447 aa12.37□□□□□ -0.43
CHD8-208ENST00000555301 CENPMQ9NSP4 180 aa12.37□□□□□ -0.43
CHD8-208ENST00000555301 EIF3KQ9UBQ5 218 aaKnown RBP12.37□□□□□ -0.43
CHD8-208ENST00000555301 POU2F3Q9UKI9 436 aa12.37□□□□□ -0.43
CHD8-208ENST00000555301 EXOGQ9Y2C4 368 aaKnown RBP12.37□□□□□ -0.43
CHD8-208ENST00000555301 ANKHD1Q8IWZ3 2542 aaKnown RBP12.36□□□□□ -0.43
CHD8-208ENST00000555301 ATP6V1G2-DDX39BF2Z307 99 aa12.36□□□□□ -0.43
CHD8-208ENST00000555301 APOL3O95236 402 aa12.36□□□□□ -0.43
CHD8-208ENST00000555301 CCL2P13500 99 aa12.36□□□□□ -0.43
CHD8-208ENST00000555301 PCSK6P29122 969 aa12.36□□□□□ -0.43
CHD8-208ENST00000555301 HCCSP53701 268 aa12.36□□□□□ -0.43
CHD8-208ENST00000555301 CXCR4P61073 352 aa12.36□□□□□ -0.43
CHD8-208ENST00000555301 EGR3Q06889 387 aa12.36□□□□□ -0.43
CHD8-208ENST00000555301 SPOCK1Q08629 439 aa12.36□□□□□ -0.43
CHD8-208ENST00000555301 ZNF787Q6DD87 383 aa12.36□□□□□ -0.43
CHD8-208ENST00000555301 HIST2H2BCQ6DN03 193 aa12.36□□□□□ -0.43
CHD8-208ENST00000555301 KRT80Q6KB66 452 aa12.36□□□□□ -0.43
CHD8-208ENST00000555301 DEGS2Q6QHC5 323 aa12.36□□□□□ -0.43
CHD8-208ENST00000555301 TMEM200AQ86VY9 491 aa12.36□□□□□ -0.43
CHD8-208ENST00000555301 HIST2H2ABQ8IUE6 130 aaPredicted RBP12.36□□□□□ -0.43
CHD8-208ENST00000555301 C1orf174Q8IYL3 243 aa12.36□□□□□ -0.43
CHD8-208ENST00000555301 NUP37Q8NFH4 326 aa12.36□□□□□ -0.43
CHD8-208ENST00000555301 OR10H4Q8NGA5 316 aa12.36□□□□□ -0.43
CHD8-208ENST00000555301 OR10S1Q8NGN2 331 aa12.36□□□□□ -0.43
CHD8-208ENST00000555301 SMAP2Q8WU79 429 aaPredicted RBP12.36□□□□□ -0.43
CHD8-208ENST00000555301 LGALS12Q96DT0 336 aa12.36□□□□□ -0.43
CHD8-208ENST00000555301 CNBD2Q96M20 576 aa12.36□□□□□ -0.43
CHD8-208ENST00000555301 MYCBPQ99417 103 aaPredicted RBP12.36□□□□□ -0.43
CHD8-208ENST00000555301 MROQ9BYG7 248 aa12.36□□□□□ -0.43
CHD8-208ENST00000555301 PLCXD1Q9NUJ7 323 aa12.36□□□□□ -0.43
CHD8-208ENST00000555301 COPS3Q9UNS2 423 aa12.36□□□□□ -0.43
CHD8-208ENST00000555301 ATP23Q9Y6H3 246 aa12.36□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms