RNA–Protein interactions for RNA: ENST00000555052.1

ARHGEF40-205, Transcript of Rho guanine nucleotide exchange factor 40, humanhuman

TSL 3

Gene ARHGEF40, Length 935 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF40-205ENST00000555052 ZNF730Q6ZMV8 503 aa13.2□□□□□ -0.3
ARHGEF40-205ENST00000555052 DOK3Q7L591 496 aa13.2□□□□□ -0.3
ARHGEF40-205ENST00000555052 SLC15A3Q8IY34 581 aa13.2□□□□□ -0.3
ARHGEF40-205ENST00000555052 OR2Z1Q8NG97 314 aa13.2□□□□□ -0.3
ARHGEF40-205ENST00000555052 RCN3Q96D15 328 aa13.2□□□□□ -0.3
ARHGEF40-205ENST00000555052 HAVCR1Q96D42 359 aa13.2□□□□□ -0.3
ARHGEF40-205ENST00000555052 DCLRE1CQ96SD1 692 aaKnown RBP13.2□□□□□ -0.3
ARHGEF40-205ENST00000555052 IL19Q9UHD0 177 aa13.2□□□□□ -0.3
ARHGEF40-205ENST00000555052 EGFL7Q9UHF1 273 aa13.2□□□□□ -0.3
ARHGEF40-205ENST00000555052 CAPN7Q9Y6W3 813 aa13.2□□□□□ -0.3
ARHGEF40-205ENST00000555052 SLC22A2O15244 555 aa13.19□□□□□ -0.3
ARHGEF40-205ENST00000555052 SF3A3Q12874 501 aaKnown RBP eCLIP13.19□□□□□ -0.31e-6■■■■□ 21.5
ARHGEF40-205ENST00000555052 ZNF154Q13106 437 aa13.19□□□□□ -0.3
ARHGEF40-205ENST00000555052 AQP6Q13520 282 aa13.19□□□□□ -0.3
ARHGEF40-205ENST00000555052 ZBED5Q49AG3 693 aa13.19□□□□□ -0.3
ARHGEF40-205ENST00000555052 CBLL1Q75N03 491 aa13.19□□□□□ -0.3
ARHGEF40-205ENST00000555052 TSEN54Q7Z6J9 526 aaKnown RBP13.19□□□□□ -0.3
ARHGEF40-205ENST00000555052 ARPINQ7Z6K5 226 aa13.19□□□□□ -0.3
ARHGEF40-205ENST00000555052 KLHL36Q8N4N3 616 aa13.19□□□□□ -0.3
ARHGEF40-205ENST00000555052 SIGLECL1Q8N7X8 197 aa13.19□□□□□ -0.3
ARHGEF40-205ENST00000555052 ITLN1Q8WWA0 313 aa13.19□□□□□ -0.3
ARHGEF40-205ENST00000555052 SLC7A6Q92536 515 aa13.19□□□□□ -0.3
ARHGEF40-205ENST00000555052 CMBLQ96DG6 245 aa13.19□□□□□ -0.3
ARHGEF40-205ENST00000555052 ZNF570Q96NI8 536 aa13.19□□□□□ -0.3
ARHGEF40-205ENST00000555052 DDX28Q9NUL7 540 aaKnown RBP13.19□□□□□ -0.3
ARHGEF40-205ENST00000555052 GRHPRQ9UBQ7 328 aa13.19□□□□□ -0.3
ARHGEF40-205ENST00000555052 ZNF69Q9UC07 566 aa13.19□□□□□ -0.3
ARHGEF40-205ENST00000555052 AP3M1Q9Y2T2 418 aa13.19□□□□□ -0.3
ARHGEF40-205ENST00000555052 PPIAL4AQ9Y536 164 aa13.19□□□□□ -0.3
ARHGEF40-205ENST00000555052 INSIG2Q9Y5U4 225 aa13.19□□□□□ -0.3
ARHGEF40-205ENST00000555052 J3QW42 95 aa13.18□□□□□ -0.3
ARHGEF40-205ENST00000555052 CXCR6O00574 342 aa13.18□□□□□ -0.3
ARHGEF40-205ENST00000555052 XKRYO14609 159 aa13.18□□□□□ -0.3
ARHGEF40-205ENST00000555052 ZNF682O95780 498 aa13.18□□□□□ -0.3
ARHGEF40-205ENST00000555052 HKR1P10072 659 aa13.18□□□□□ -0.3
ARHGEF40-205ENST00000555052 RPL4P36578 427 aaKnown RBP13.18□□□□□ -0.3
ARHGEF40-205ENST00000555052 LIPEQ05469 1076 aa13.18□□□□□ -0.3
ARHGEF40-205ENST00000555052 IFI44LQ53G44 452 aa13.18□□□□□ -0.3
ARHGEF40-205ENST00000555052 CCDC92Q53HC0 331 aaPredicted RBP13.18□□□□□ -0.3
ARHGEF40-205ENST00000555052 ARMCX4Q5H9R4 360 aa13.18□□□□□ -0.3
ARHGEF40-205ENST00000555052 OTPQ5XKR4 325 aa13.18□□□□□ -0.3
ARHGEF40-205ENST00000555052 POU5F2Q8N7G0 328 aa13.18□□□□□ -0.3
ARHGEF40-205ENST00000555052 SLC7A13Q8TCU3 470 aa13.18□□□□□ -0.3
ARHGEF40-205ENST00000555052 RASD2Q96D21 266 aa13.18□□□□□ -0.3
ARHGEF40-205ENST00000555052 HSH2DQ96JZ2 352 aa13.18□□□□□ -0.3
ARHGEF40-205ENST00000555052 C1orf147Q96MC9 270 aaPredicted RBP13.18□□□□□ -0.3
ARHGEF40-205ENST00000555052 OR2V2Q96R30 315 aa13.18□□□□□ -0.3
ARHGEF40-205ENST00000555052 GPX7Q96SL4 187 aaPredicted RBP13.18□□□□□ -0.3
ARHGEF40-205ENST00000555052 ANKRD19PQ9H560 264 aa13.18□□□□□ -0.3
ARHGEF40-205ENST00000555052 PLEK2Q9NYT0 353 aa13.18□□□□□ -0.3
ARHGEF40-205ENST00000555052 VSX1Q9NZR4 365 aaPredicted RBP13.18□□□□□ -0.3
ARHGEF40-205ENST00000555052 ARMCX1Q9P291 453 aa13.18□□□□□ -0.3
ARHGEF40-205ENST00000555052 ASH2LQ9UBL3 628 aa13.18□□□□□ -0.3
ARHGEF40-205ENST00000555052 ATPIF1Q9UII2 106 aa13.18□□□□□ -0.3
ARHGEF40-205ENST00000555052 NUP50Q9UKX7 468 aa13.18□□□□□ -0.3
ARHGEF40-205ENST00000555052 PPP1R3CQ9UQK1 317 aa13.18□□□□□ -0.3
ARHGEF40-205ENST00000555052 AUP1Q9Y679 476 aa13.18□□□□□ -0.3
ARHGEF40-205ENST00000555052 DNAJC9-AS1A6NH13 148 aa13.17□□□□□ -0.3
ARHGEF40-205ENST00000555052 TMEM178BH3BS89 294 aa13.17□□□□□ -0.3
ARHGEF40-205ENST00000555052 NME4O00746 187 aa13.17□□□□□ -0.3
ARHGEF40-205ENST00000555052 IMPA2O14732 288 aa13.17□□□□□ -0.3
ARHGEF40-205ENST00000555052 SURF4O15260 269 aa13.17□□□□□ -0.3
ARHGEF40-205ENST00000555052 PTP4A3O75365 173 aa13.17□□□□□ -0.3
ARHGEF40-205ENST00000555052 RAC2P15153 192 aa13.17□□□□□ -0.3
ARHGEF40-205ENST00000555052 PRTN3P24158 256 aa13.17□□□□□ -0.3
ARHGEF40-205ENST00000555052 SDHAP31040 664 aa13.17□□□□□ -0.3
ARHGEF40-205ENST00000555052 MDH2P40926 338 aaKnown RBP13.17□□□□□ -0.3
ARHGEF40-205ENST00000555052 MMP16P51512 607 aa13.17□□□□□ -0.3
ARHGEF40-205ENST00000555052 LSM6P62312 80 aaKnown RBP13.17□□□□□ -0.3
ARHGEF40-205ENST00000555052 GUCY1A3Q02108 690 aa13.17□□□□□ -0.3
ARHGEF40-205ENST00000555052 KRR1Q13601 381 aaKnown RBP13.17□□□□□ -0.3
ARHGEF40-205ENST00000555052 C8orf82Q6P1X6 216 aaPredicted RBP13.17□□□□□ -0.3
ARHGEF40-205ENST00000555052 FBXW12Q6X9E4 464 aa13.17□□□□□ -0.3
ARHGEF40-205ENST00000555052 PTP4A1Q93096 173 aa13.17□□□□□ -0.3
ARHGEF40-205ENST00000555052 COG8Q96MW5 612 aa13.17□□□□□ -0.3
ARHGEF40-205ENST00000555052 ZNF48Q96MX3 618 aaPredicted RBP13.17□□□□□ -0.3
ARHGEF40-205ENST00000555052 ZNF747Q9BV97 191 aa13.17□□□□□ -0.3
ARHGEF40-205ENST00000555052 SYT4Q9H2B2 425 aa13.17□□□□□ -0.3
ARHGEF40-205ENST00000555052 NMNAT1Q9HAN9 279 aaPredicted RBP13.17□□□□□ -0.3
ARHGEF40-205ENST00000555052 GCM1Q9NP62 436 aa13.17□□□□□ -0.3
ARHGEF40-205ENST00000555052 NRIP3Q9NQ35 241 aa13.17□□□□□ -0.3
ARHGEF40-205ENST00000555052 SIGLEC7Q9Y286 467 aa13.17□□□□□ -0.3
ARHGEF40-205ENST00000555052 TMEM5Q9Y2B1 443 aa13.17□□□□□ -0.3
ARHGEF40-205ENST00000555052 CEACAM18A8MTB9 384 aa13.16□□□□□ -0.3
ARHGEF40-205ENST00000555052 KHDRBS3O75525 346 aaKnown RBP13.16□□□□□ -0.3
ARHGEF40-205ENST00000555052 NDUFB2O95178 105 aa13.16□□□□□ -0.3
ARHGEF40-205ENST00000555052 DBHP09172 617 aa13.16□□□□□ -0.3
ARHGEF40-205ENST00000555052 RGS6P49758 472 aa13.16□□□□□ -0.3
ARHGEF40-205ENST00000555052 SLC7A2P52569 658 aa13.16□□□□□ -0.3
ARHGEF40-205ENST00000555052 FXYD6P3P58550 94 aa13.16□□□□□ -0.3
ARHGEF40-205ENST00000555052 PAX2Q02962 417 aa13.16□□□□□ -0.3
ARHGEF40-205ENST00000555052 PAX8Q06710 450 aa13.16□□□□□ -0.3
ARHGEF40-205ENST00000555052 FOXL1Q12952 345 aa13.16□□□□□ -0.3
ARHGEF40-205ENST00000555052 HLXQ14774 488 aaPredicted RBP13.16□□□□□ -0.3
ARHGEF40-205ENST00000555052 KCNMB1Q16558 191 aa13.16□□□□□ -0.3
ARHGEF40-205ENST00000555052 PRR31Q5SQ13 230 aa13.16□□□□□ -0.3
ARHGEF40-205ENST00000555052 GPR139Q6DWJ6 353 aa13.16□□□□□ -0.3
ARHGEF40-205ENST00000555052 RBMS3Q6XE24 437 aaKnown RBP13.16□□□□□ -0.3
ARHGEF40-205ENST00000555052 PTCHD4Q6ZW05 846 aa13.16□□□□□ -0.3
ARHGEF40-205ENST00000555052 GLB1L2Q8IW92 636 aa13.16□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms