RNA–Protein interactions for RNA: ENST00000554873.5

SYNE3-203, Transcript of spectrin repeat containing nuclear envelope family member 3, humanhuman

TSL 5 BASIC

Gene SYNE3, Length 2,826 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE3-203ENST00000554873 DOK4Q8TEW6 326 aa14.12□□□□□ -0.15
SYNE3-203ENST00000554873 TMEM239Q8WW34 195 aa14.12□□□□□ -0.15
SYNE3-203ENST00000554873 ZMYND19Q96E35 227 aaPredicted RBP14.12□□□□□ -0.15
SYNE3-203ENST00000554873 CNN2Q99439 309 aaKnown RBP14.12□□□□□ -0.15
SYNE3-203ENST00000554873 SDF2Q99470 211 aa14.12□□□□□ -0.15
SYNE3-203ENST00000554873 GPR174Q9BXC1 333 aa14.12□□□□□ -0.15
SYNE3-203ENST00000554873 GPR61Q9BZJ8 451 aa14.12□□□□□ -0.15
SYNE3-203ENST00000554873 SPACA1Q9HBV2 294 aa14.12□□□□□ -0.15
SYNE3-203ENST00000554873 PRSS16Q9NQE7 514 aa14.12□□□□□ -0.15
SYNE3-203ENST00000554873 OR2S2Q9NQN1 319 aa14.12□□□□□ -0.15
SYNE3-203ENST00000554873 SIRT7Q9NRC8 400 aa14.12□□□□□ -0.15
SYNE3-203ENST00000554873 CDV3Q9UKY7 258 aaKnown RBP14.12□□□□□ -0.15
SYNE3-203ENST00000554873 TBC1D3BA6NDS4 549 aa14.12□□□□□ -0.15
SYNE3-203ENST00000554873 C1QTNF3-AMACRE9PGA6 284 aa14.12□□□□□ -0.15
SYNE3-203ENST00000554873 TBC1D3HP0C7X1 549 aa14.12□□□□□ -0.15
SYNE3-203ENST00000554873 EDN3P14138 238 aa14.12□□□□□ -0.15
SYNE3-203ENST00000554873 HNRNPKP61978 463 aaKnown RBP eCLIP14.12□□□□□ -0.152e-8■■■■■ 27.6
SYNE3-203ENST00000554873 OR1Q1Q15612 314 aa14.12□□□□□ -0.15
SYNE3-203ENST00000554873 TBC1D3GQ6DHY5 549 aa14.12□□□□□ -0.15
SYNE3-203ENST00000554873 OR2L13Q8N349 312 aa14.12□□□□□ -0.15
SYNE3-203ENST00000554873 MFSD9Q8NBP5 474 aa14.12□□□□□ -0.15
SYNE3-203ENST00000554873 SUSD6Q92537 303 aa14.12□□□□□ -0.15
SYNE3-203ENST00000554873 GAL3ST3Q96A11 431 aa14.12□□□□□ -0.15
SYNE3-203ENST00000554873 RAB33BQ9H082 229 aa14.12□□□□□ -0.15
SYNE3-203ENST00000554873 MRPS23Q9Y3D9 190 aaKnown RBP14.12□□□□□ -0.15
SYNE3-203ENST00000554873 HDGFL3Q9Y3E1 203 aa14.12□□□□□ -0.15
SYNE3-203ENST00000554873 PRAMEF26H0Y7S4 382 aa14.11□□□□□ -0.15
SYNE3-203ENST00000554873 LYPD3O95274 346 aa14.11□□□□□ -0.15
SYNE3-203ENST00000554873 OR2C1O95371 312 aa14.11□□□□□ -0.15
SYNE3-203ENST00000554873 LIPCP11150 499 aa14.11□□□□□ -0.15
SYNE3-203ENST00000554873 CSRP1P21291 193 aaKnown RBP14.11□□□□□ -0.15
SYNE3-203ENST00000554873 DRD3P35462 400 aa14.11□□□□□ -0.15
SYNE3-203ENST00000554873 DUSP8Q13202 625 aa14.11□□□□□ -0.15
SYNE3-203ENST00000554873 PPP1R1AQ13522 171 aa14.11□□□□□ -0.15
SYNE3-203ENST00000554873 COL13A1Q5TAT6 717 aaPredicted RBP14.11□□□□□ -0.15
SYNE3-203ENST00000554873 BIVMQ86UB2 503 aa14.11□□□□□ -0.15
SYNE3-203ENST00000554873 PRR18Q8N4B5 295 aa14.11□□□□□ -0.15
SYNE3-203ENST00000554873 OR13C2Q8NGS9 318 aa14.11□□□□□ -0.15
SYNE3-203ENST00000554873 ST7LQ8TDW4 575 aa14.11□□□□□ -0.15
SYNE3-203ENST00000554873 ARSGQ96EG1 525 aa14.11□□□□□ -0.15
SYNE3-203ENST00000554873 POM121Q96HA1 1249 aa14.11□□□□□ -0.15
SYNE3-203ENST00000554873 C5orf51A6NDU8 294 aa14.11□□□□□ -0.15
SYNE3-203ENST00000554873 SRPX2O60687 465 aaPredicted RBP14.11□□□□□ -0.15
SYNE3-203ENST00000554873 ZFPL1O95159 310 aa14.11□□□□□ -0.15
SYNE3-203ENST00000554873 OR8U9P0C7N5 309 aa14.11□□□□□ -0.15
SYNE3-203ENST00000554873 ZNF735P0CB33 412 aa14.11□□□□□ -0.15
SYNE3-203ENST00000554873 MNX1P50219 401 aaPredicted RBP14.11□□□□□ -0.15
SYNE3-203ENST00000554873 EFNB2P52799 333 aa14.11□□□□□ -0.15
SYNE3-203ENST00000554873 MEF2DQ14814 521 aa14.11□□□□□ -0.15
SYNE3-203ENST00000554873 RANBP3LQ86VV4 465 aaPredicted RBP14.11□□□□□ -0.15
SYNE3-203ENST00000554873 LRRC25Q8N386 305 aaPredicted RBP14.11□□□□□ -0.15
SYNE3-203ENST00000554873 PRSS35Q8N3Z0 413 aa14.11□□□□□ -0.15
SYNE3-203ENST00000554873 OR13C8Q8NGS7 320 aa14.11□□□□□ -0.15
SYNE3-203ENST00000554873 OR8U1Q8NH10 309 aa14.11□□□□□ -0.15
SYNE3-203ENST00000554873 OR10J5Q8NHC4 309 aa14.11□□□□□ -0.15
SYNE3-203ENST00000554873 R3HDM4Q96D70 268 aa14.11□□□□□ -0.15
SYNE3-203ENST00000554873 CAPNS2Q96L46 248 aa14.11□□□□□ -0.15
SYNE3-203ENST00000554873 ATG101Q9BSB4 218 aa14.11□□□□□ -0.15
SYNE3-203ENST00000554873 MMACHCQ9Y4U1 282 aa14.11□□□□□ -0.15
SYNE3-203ENST00000554873 LOC100509620A0A075B734 347 aa14.1□□□□□ -0.15
SYNE3-203ENST00000554873 SOD3P08294 240 aa14.1□□□□□ -0.15
SYNE3-203ENST00000554873 NAA10P41227 235 aaPredicted RBP14.1□□□□□ -0.15
SYNE3-203ENST00000554873 TSFMP43897 325 aaKnown RBP14.1□□□□□ -0.15
SYNE3-203ENST00000554873 MTSS1LQ765P7 747 aa14.1□□□□□ -0.15
SYNE3-203ENST00000554873 TAF8Q7Z7C8 310 aa14.1□□□□□ -0.15
SYNE3-203ENST00000554873 SLC35F3Q8IY50 421 aa14.1□□□□□ -0.15
SYNE3-203ENST00000554873 OR10AD1Q8NGE0 317 aa14.1□□□□□ -0.15
SYNE3-203ENST00000554873 CFHR5Q9BXR6 569 aa14.1□□□□□ -0.15
SYNE3-203ENST00000554873 RNF208Q9H0X6 261 aa14.1□□□□□ -0.15
SYNE3-203ENST00000554873 FBXO34Q9NWN3 711 aa14.1□□□□□ -0.15
SYNE3-203ENST00000554873 ICAM5Q9UMF0 924 aa14.1□□□□□ -0.15
SYNE3-203ENST00000554873 SIGLEC7Q9Y286 467 aa14.1□□□□□ -0.15
SYNE3-203ENST00000554873 STARD10Q9Y365 291 aa14.1□□□□□ -0.15
SYNE3-203ENST00000554873 INSL6Q9Y581 213 aa14.1□□□□□ -0.15
SYNE3-203ENST00000554873 NPIPA5A0A0B4J1W7 369 aa14.1□□□□□ -0.15
SYNE3-203ENST00000554873 SYNDIG1LA6NDD5 238 aa14.1□□□□□ -0.15
SYNE3-203ENST00000554873 NPIPA7E9PJI5 369 aa14.1□□□□□ -0.15
SYNE3-203ENST00000554873 DNAJB6O75190 326 aa14.1□□□□□ -0.15
SYNE3-203ENST00000554873 ADAP1O75689 374 aa14.1□□□□□ -0.15
SYNE3-203ENST00000554873 SFTPBP07988 381 aa14.1□□□□□ -0.15
SYNE3-203ENST00000554873 NPIPA8P0DM63 369 aa14.1□□□□□ -0.15
SYNE3-203ENST00000554873 RPS23P62266 143 aaKnown RBP14.1□□□□□ -0.15
SYNE3-203ENST00000554873 IL13RA1P78552 427 aa14.1□□□□□ -0.15
SYNE3-203ENST00000554873 Q499Y3 187 aa14.1□□□□□ -0.15
SYNE3-203ENST00000554873 SCGB2B2Q4G0G5 96 aa14.1□□□□□ -0.15
SYNE3-203ENST00000554873 CD163Q86VB7 1156 aa14.1□□□□□ -0.15
SYNE3-203ENST00000554873 OR51A7Q8NH64 312 aa14.1□□□□□ -0.15
SYNE3-203ENST00000554873 MR1Q95460 341 aa14.1□□□□□ -0.15
SYNE3-203ENST00000554873 ZNF775Q96BV0 537 aaPredicted RBP14.1□□□□□ -0.15
SYNE3-203ENST00000554873 BPIFA2Q96DR5 249 aa14.1□□□□□ -0.15
SYNE3-203ENST00000554873 RAB11FIP5Q9BXF6 653 aa14.1□□□□□ -0.15
SYNE3-203ENST00000554873 NMES1Q9C002 83 aa14.1□□□□□ -0.15
SYNE3-203ENST00000554873 VSIG4Q9Y279 399 aa14.1□□□□□ -0.15
SYNE3-203ENST00000554873 TRAV27A0A087WT01 109 aa14.1□□□□□ -0.15
SYNE3-203ENST00000554873 ZNF724A8MTY0 619 aa14.1□□□□□ -0.15
SYNE3-203ENST00000554873 AGR2O95994 175 aa14.1□□□□□ -0.15
SYNE3-203ENST00000554873 CRYABP02511 175 aaKnown RBP14.1□□□□□ -0.15
SYNE3-203ENST00000554873 ZNF888P0CJ79 500 aaPredicted RBP14.1□□□□□ -0.15
SYNE3-203ENST00000554873 S1PR1P21453 382 aa14.1□□□□□ -0.15
SYNE3-203ENST00000554873 CYCSP99999 105 aaKnown RBP14.1□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms