RNA–Protein interactions for RNA: ENST00000554584.5

SYNE2-212, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 5 BASIC

Gene SYNE2, Length 20,508 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-212ENST00000554584 PEA15Q15121 130 aa3.02□□□□□ -1.93
SYNE2-212ENST00000554584 OR2G6Q5TZ20 316 aa3.02□□□□□ -1.93
SYNE2-212ENST00000554584 OVCH2Q7RTZ1 564 aa3.02□□□□□ -1.93
SYNE2-212ENST00000554584 OR6K3Q8NGY3 331 aa3.02□□□□□ -1.93
SYNE2-212ENST00000554584 OR2T6Q8NHC8 308 aa3.02□□□□□ -1.93
SYNE2-212ENST00000554584 BTF3L4Q96K17 158 aa3.02□□□□□ -1.93
SYNE2-212ENST00000554584 BMFQ96LC9 184 aa3.02□□□□□ -1.93
SYNE2-212ENST00000554584 ZNF778Q96MU6 729 aa3.02□□□□□ -1.93
SYNE2-212ENST00000554584 CD244Q9BZW8 370 aa3.02□□□□□ -1.93
SYNE2-212ENST00000554584 ALX4Q9H161 411 aaPredicted RBP3.02□□□□□ -1.93
SYNE2-212ENST00000554584 TRAV12-3A0A0B4J271 114 aa3.02□□□□□ -1.93
SYNE2-212ENST00000554584 LOC389332A0A1B0GUA5 103 aa3.02□□□□□ -1.93
SYNE2-212ENST00000554584 FZD9O00144 591 aa3.02□□□□□ -1.93
SYNE2-212ENST00000554584 CD96P40200 585 aa3.02□□□□□ -1.93
SYNE2-212ENST00000554584 C19orf54Q5BKX5 351 aa3.02□□□□□ -1.93
SYNE2-212ENST00000554584 DHRS11Q6UWP2 260 aa3.02□□□□□ -1.93
SYNE2-212ENST00000554584 OR2C3Q8N628 320 aa3.02□□□□□ -1.93
SYNE2-212ENST00000554584 UCN3Q969E3 161 aa3.02□□□□□ -1.93
SYNE2-212ENST00000554584 LRRC3Q9BY71 257 aa3.02□□□□□ -1.93
SYNE2-212ENST00000554584 HES4Q9HCC6 221 aa3.02□□□□□ -1.93
SYNE2-212ENST00000554584 HCFC2Q9Y5Z7 792 aa3.02□□□□□ -1.93
SYNE2-212ENST00000554584 UBR1Q8IWV7 1749 aa3.02□□□□□ -1.93
SYNE2-212ENST00000554584 SHMT2P34897 504 aa3.02□□□□□ -1.93
SYNE2-212ENST00000554584 TAS2R46P59540 309 aa3.02□□□□□ -1.93
SYNE2-212ENST00000554584 TRNP1Q6NT89 227 aa3.02□□□□□ -1.93
SYNE2-212ENST00000554584 NRG4Q8WWG1 115 aa3.02□□□□□ -1.93
SYNE2-212ENST00000554584 NKD2Q969F2 451 aaPredicted RBP3.02□□□□□ -1.93
SYNE2-212ENST00000554584 PTDSS2Q9BVG9 487 aa3.02□□□□□ -1.93
SYNE2-212ENST00000554584 NGBQ9NPG2 151 aa3.02□□□□□ -1.93
SYNE2-212ENST00000554584 BABAM2Q9NXR7 383 aa3.02□□□□□ -1.93
SYNE2-212ENST00000554584 AQP8O94778 261 aa3.02□□□□□ -1.93
SYNE2-212ENST00000554584 SPANXN5Q5MJ07 72 aa3.02□□□□□ -1.93
SYNE2-212ENST00000554584 ZNF684Q5T5D7 378 aa3.02□□□□□ -1.93
SYNE2-212ENST00000554584 CCBE1Q6UXH8 406 aaPredicted RBP3.02□□□□□ -1.93
SYNE2-212ENST00000554584 UTP4Q969X6 686 aaKnown RBP3.02□□□□□ -1.93
SYNE2-212ENST00000554584 PECRQ9BY49 303 aa3.02□□□□□ -1.93
SYNE2-212ENST00000554584 CYSLTR2Q9NS75 346 aa3.02□□□□□ -1.93
SYNE2-212ENST00000554584 LGALS13Q9UHV8 139 aa3.02□□□□□ -1.93
SYNE2-212ENST00000554584 MRPS28Q9Y2Q9 187 aaKnown RBP3.02□□□□□ -1.93
SYNE2-212ENST00000554584 HIVEP2P31629 2446 aa3.02□□□□□ -1.93
SYNE2-212ENST00000554584 MST1RQ04912 1400 aa3.02□□□□□ -1.93
SYNE2-212ENST00000554584 TMEM72A0PK05 275 aa3.02□□□□□ -1.93
SYNE2-212ENST00000554584 SLC22A5O76082 557 aa3.02□□□□□ -1.93
SYNE2-212ENST00000554584 RAP2BP61225 183 aa3.02□□□□□ -1.93
SYNE2-212ENST00000554584 ACVR1Q04771 509 aa3.02□□□□□ -1.93
SYNE2-212ENST00000554584 FUT2Q10981 343 aa3.02□□□□□ -1.93
SYNE2-212ENST00000554584 OR8J3Q8NGG0 315 aa3.02□□□□□ -1.93
SYNE2-212ENST00000554584 POTEKPQ9BYX7 375 aa3.02□□□□□ -1.93
SYNE2-212ENST00000554584 DZANK1Q9NVP4 752 aa3.02□□□□□ -1.93
SYNE2-212ENST00000554584 HIVEP3Q5T1R4 2406 aa3.02□□□□□ -1.93
SYNE2-212ENST00000554584 PLIN4Q96Q06 1357 aa3.02□□□□□ -1.93
SYNE2-212ENST00000554584 ADGRB3O60242 1522 aa3.02□□□□□ -1.93
SYNE2-212ENST00000554584 BCAS2O75934 225 aaPredicted RBP3.02□□□□□ -1.93
SYNE2-212ENST00000554584 MAP2K3P46734 347 aa3.02□□□□□ -1.93
SYNE2-212ENST00000554584 SERTAD2Q14140 314 aa3.02□□□□□ -1.93
SYNE2-212ENST00000554584 ZNF169Q14929 603 aaPredicted RBP3.02□□□□□ -1.93
SYNE2-212ENST00000554584 MRAPQ8TCY5 172 aa3.02□□□□□ -1.93
SYNE2-212ENST00000554584 ZNF436Q9C0F3 470 aaPredicted RBP3.02□□□□□ -1.93
SYNE2-212ENST00000554584 C1orf123Q9NWV4 160 aa3.02□□□□□ -1.93
SYNE2-212ENST00000554584 COL2A1P02458 1487 aaPredicted RBP3.02□□□□□ -1.93
SYNE2-212ENST00000554584 A0A0G2JLL6 359 aaPredicted RBP3.02□□□□□ -1.93
SYNE2-212ENST00000554584 TMEM269A0A1B0GVZ9 245 aa3.02□□□□□ -1.93
SYNE2-212ENST00000554584 DHRS7CA6NNS2 312 aa3.02□□□□□ -1.93
SYNE2-212ENST00000554584 CREG1O75629 220 aa3.02□□□□□ -1.93
SYNE2-212ENST00000554584 CAMPP49913 170 aa3.02□□□□□ -1.93
SYNE2-212ENST00000554584 C6orf15Q6UXA7 325 aaPredicted RBP3.02□□□□□ -1.93
SYNE2-212ENST00000554584 PRRT2Q7Z6L0 340 aaPredicted RBP3.02□□□□□ -1.93
SYNE2-212ENST00000554584 CCDC71LQ8N9Z2 235 aa3.02□□□□□ -1.93
SYNE2-212ENST00000554584 CHPT1Q8WUD6 406 aa3.02□□□□□ -1.93
SYNE2-212ENST00000554584 CDX2Q99626 313 aaPredicted RBP3.02□□□□□ -1.93
SYNE2-212ENST00000554584 SLC25A51Q9H1U9 297 aa3.02□□□□□ -1.93
SYNE2-212ENST00000554584 DHX33Q9H6R0 707 aaKnown RBP3.02□□□□□ -1.93
SYNE2-212ENST00000554584 ZNF236Q9UL36 1845 aa3.02□□□□□ -1.93
SYNE2-212ENST00000554584 CSPG4Q6UVK1 2322 aa3.02□□□□□ -1.93
SYNE2-212ENST00000554584 LRCH4O75427 683 aa3.02□□□□□ -1.93
SYNE2-212ENST00000554584 CNMDO75829 334 aa3.02□□□□□ -1.93
SYNE2-212ENST00000554584 NAT2P11245 290 aa3.02□□□□□ -1.93
SYNE2-212ENST00000554584 IMPDH1P20839 514 aa3.02□□□□□ -1.93
SYNE2-212ENST00000554584 C6orf89Q6UWU4 347 aa3.02□□□□□ -1.93
SYNE2-212ENST00000554584 ZNF480Q8WV37 535 aa3.02□□□□□ -1.93
SYNE2-212ENST00000554584 KCNJ16Q9NPI9 418 aa3.02□□□□□ -1.93
SYNE2-212ENST00000554584 TAS2R5Q9NYW4 299 aa3.02□□□□□ -1.93
SYNE2-212ENST00000554584 VWDEQ8N2E2 1590 aa3.02□□□□□ -1.93
SYNE2-212ENST00000554584 CLDN24A6NM45 220 aa3.02□□□□□ -1.93
SYNE2-212ENST00000554584 DNAJB5O75953 348 aa3.02□□□□□ -1.93
SYNE2-212ENST00000554584 NKX2-2O95096 273 aa3.02□□□□□ -1.93
SYNE2-212ENST00000554584 AREGP15514 252 aa3.02□□□□□ -1.93
SYNE2-212ENST00000554584 HMGCLP35914 325 aa3.02□□□□□ -1.93
SYNE2-212ENST00000554584 HIST2H2BDQ6DRA6 164 aa3.02□□□□□ -1.93
SYNE2-212ENST00000554584 PPTC7Q8NI37 304 aa3.02□□□□□ -1.93
SYNE2-212ENST00000554584 EDAQ92838 391 aa3.02□□□□□ -1.93
SYNE2-212ENST00000554584 LGALS12Q96DT0 336 aa3.02□□□□□ -1.93
SYNE2-212ENST00000554584 LRR1Q96L50 414 aa3.02□□□□□ -1.93
SYNE2-212ENST00000554584 GPR22Q99680 433 aa3.02□□□□□ -1.93
SYNE2-212ENST00000554584 OR51I2Q9H344 312 aa3.02□□□□□ -1.93
SYNE2-212ENST00000554584 CLEC2LP0C7M8 214 aa3.02□□□□□ -1.93
SYNE2-212ENST00000554584 RPL29P47914 159 aaKnown RBP3.02□□□□□ -1.93
SYNE2-212ENST00000554584 TPMTP51580 245 aa3.02□□□□□ -1.93
SYNE2-212ENST00000554584 CSNK1G2P78368 415 aa3.02□□□□□ -1.93
SYNE2-212ENST00000554584 TMEM207Q6UWW9 146 aa3.02□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 87.6 ms