RNA–Protein interactions for RNA: ENST00000554437.5

SCFD1-211, Transcript of sec1 family domain containing 1, humanhuman

TSL 3

Gene SCFD1, Length 688 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-211ENST00000554437 PTGDSP41222 190 aa3.49□□□□□ -1.85
SCFD1-211ENST00000554437 MAGEA6P43360 314 aa3.49□□□□□ -1.85
SCFD1-211ENST00000554437 DNASE1L1P49184 302 aa3.49□□□□□ -1.85
SCFD1-211ENST00000554437 MLF1P58340 268 aa3.49□□□□□ -1.85
SCFD1-211ENST00000554437 PITPNAQ00169 270 aa3.49□□□□□ -1.85
SCFD1-211ENST00000554437 OR4D1Q15615 310 aa3.49□□□□□ -1.85
SCFD1-211ENST00000554437 PSMD5Q16401 504 aa3.49□□□□□ -1.85
SCFD1-211ENST00000554437 KCTD19Q17RG1 926 aaPredicted RBP3.49□□□□□ -1.85
SCFD1-211ENST00000554437 NDUFAF6Q330K2 333 aa3.49□□□□□ -1.85
SCFD1-211ENST00000554437 THEM4Q5T1C6 240 aa3.49□□□□□ -1.85
SCFD1-211ENST00000554437 APOBEC3HQ6NTF7 200 aaKnown RBP3.49□□□□□ -1.85
SCFD1-211ENST00000554437 CLEC18BQ6UXF7 455 aa3.49□□□□□ -1.85
SCFD1-211ENST00000554437 ABHD13Q7L211 337 aa3.49□□□□□ -1.85
SCFD1-211ENST00000554437 SSX6Q7RTT6 188 aa3.49□□□□□ -1.85
SCFD1-211ENST00000554437 BOD1L2Q8IYS8 172 aa3.49□□□□□ -1.85
SCFD1-211ENST00000554437 PDIK1LQ8N165 341 aa3.49□□□□□ -1.85
SCFD1-211ENST00000554437 SVOPLQ8N434 492 aa3.49□□□□□ -1.85
SCFD1-211ENST00000554437 OR5T1Q8NG75 326 aa3.49□□□□□ -1.85
SCFD1-211ENST00000554437 OR6K2Q8NGY2 324 aa3.49□□□□□ -1.85
SCFD1-211ENST00000554437 OR2G2Q8NGZ5 317 aa3.49□□□□□ -1.85
SCFD1-211ENST00000554437 ITFG1Q8TB96 612 aa3.49□□□□□ -1.85
SCFD1-211ENST00000554437 CXorf40AQ8TE69 158 aa3.49□□□□□ -1.85
SCFD1-211ENST00000554437 FRAT1Q92837 279 aaPredicted RBP3.49□□□□□ -1.85
SCFD1-211ENST00000554437 MARC2Q969Z3 335 aa3.49□□□□□ -1.85
SCFD1-211ENST00000554437 API5Q9BZZ5 524 aaKnown RBP3.49□□□□□ -1.85
SCFD1-211ENST00000554437 SIRT7Q9NRC8 400 aa3.49□□□□□ -1.85
SCFD1-211ENST00000554437 B3GNT2Q9NY97 397 aa3.49□□□□□ -1.85
SCFD1-211ENST00000554437 LGALS13Q9UHV8 139 aa3.49□□□□□ -1.85
SCFD1-211ENST00000554437 CNTNAP1P78357 1384 aa3.49□□□□□ -1.85
SCFD1-211ENST00000554437 FHOD3Q2V2M9 1422 aa3.48□□□□□ -1.85
SCFD1-211ENST00000554437 LOC100131303A0A0U1RQF7 123 aa3.48□□□□□ -1.85
SCFD1-211ENST00000554437 USP27XA6NNY8 438 aa3.48□□□□□ -1.85
SCFD1-211ENST00000554437 B4DXG7 233 aa3.48□□□□□ -1.85
SCFD1-211ENST00000554437 LOC110117498-PIK3R3F6TDL0 507 aa3.48□□□□□ -1.85
SCFD1-211ENST00000554437 LSM8O95777 96 aaKnown RBP3.48□□□□□ -1.85
SCFD1-211ENST00000554437 SLC35E2BP0CK96 405 aa3.48□□□□□ -1.85
SCFD1-211ENST00000554437 SMIM10L1P0DMW3 83 aa3.48□□□□□ -1.85
SCFD1-211ENST00000554437 EPHX2P34913 555 aa3.48□□□□□ -1.85
SCFD1-211ENST00000554437 RANBP1P43487 201 aa3.48□□□□□ -1.85
SCFD1-211ENST00000554437 EFNA3P52797 238 aa3.48□□□□□ -1.85
SCFD1-211ENST00000554437 MRPS11P82912 194 aaKnown RBP3.48□□□□□ -1.85
SCFD1-211ENST00000554437 EXOC3L4Q17RC7 722 aa3.48□□□□□ -1.85
SCFD1-211ENST00000554437 C5orf64Q2M2E5 130 aa3.48□□□□□ -1.85
SCFD1-211ENST00000554437 OR2B11Q5JQS5 317 aa3.48□□□□□ -1.85
SCFD1-211ENST00000554437 FAHD1Q6P587 224 aa3.48□□□□□ -1.85
SCFD1-211ENST00000554437 TRIM40Q6P9F5 258 aa3.48□□□□□ -1.85
SCFD1-211ENST00000554437 TMEM179BQ7Z7N9 219 aa3.48□□□□□ -1.85
SCFD1-211ENST00000554437 PLA2G4DQ86XP0 818 aa3.48□□□□□ -1.85
SCFD1-211ENST00000554437 TGIF2LYQ8IUE0 185 aa3.48□□□□□ -1.85
SCFD1-211ENST00000554437 LRRC34Q8IZ02 419 aa3.48□□□□□ -1.85
SCFD1-211ENST00000554437 PRELID2Q8N945 189 aa3.48□□□□□ -1.85
SCFD1-211ENST00000554437 OR6K6Q8NGW6 343 aa3.48□□□□□ -1.85
SCFD1-211ENST00000554437 OR51F2Q8NH61 342 aa3.48□□□□□ -1.85
SCFD1-211ENST00000554437 OR56B4Q8NH76 319 aa3.48□□□□□ -1.85
SCFD1-211ENST00000554437 OR8D1Q8WZ84 308 aa3.48□□□□□ -1.85
SCFD1-211ENST00000554437 NDRG1Q92597 394 aaKnown RBP3.48□□□□□ -1.85
SCFD1-211ENST00000554437 PPP1R14BQ96C90 147 aa3.48□□□□□ -1.85
SCFD1-211ENST00000554437 SMIM10Q96HG1 83 aa3.48□□□□□ -1.85
SCFD1-211ENST00000554437 NOL4LQ96MY1 436 aaPredicted RBP3.48□□□□□ -1.85
SCFD1-211ENST00000554437 SERPINB12Q96P63 405 aa3.48□□□□□ -1.85
SCFD1-211ENST00000554437 MRPL45Q9BRJ2 306 aaKnown RBP3.48□□□□□ -1.85
SCFD1-211ENST00000554437 WDR55Q9H6Y2 383 aaPredicted RBP3.48□□□□□ -1.85
SCFD1-211ENST00000554437 CWH43Q9H720 699 aa3.48□□□□□ -1.85
SCFD1-211ENST00000554437 PTGES2Q9H7Z7 377 aa3.48□□□□□ -1.85
SCFD1-211ENST00000554437 WDR54Q9H977 334 aa3.48□□□□□ -1.85
SCFD1-211ENST00000554437 TREX1Q9NSU2 369 aa3.48□□□□□ -1.85
SCFD1-211ENST00000554437 RMND1Q9NWS8 449 aa3.48□□□□□ -1.85
SCFD1-211ENST00000554437 CLN6Q9NWW5 311 aa3.48□□□□□ -1.85
SCFD1-211ENST00000554437 ATPIF1Q9UII2 106 aa3.48□□□□□ -1.85
SCFD1-211ENST00000554437 GLYATL1P3A0A0U1RQE8 302 aa3.47□□□□□ -1.85
SCFD1-211ENST00000554437 A0A1B0GW55 424 aa3.47□□□□□ -1.85
SCFD1-211ENST00000554437 GOLGA8IPA6NC78 632 aa3.47□□□□□ -1.85
SCFD1-211ENST00000554437 GOLGA6L10A6NI86 522 aa3.47□□□□□ -1.85
SCFD1-211ENST00000554437 LYRM9A8MSI8 78 aa3.47□□□□□ -1.85
SCFD1-211ENST00000554437 DCTN6O00399 190 aa3.47□□□□□ -1.85
SCFD1-211ENST00000554437 MRPS12O15235 138 aaKnown RBP3.47□□□□□ -1.85
SCFD1-211ENST00000554437 AQP9O43315 295 aa3.47□□□□□ -1.85
SCFD1-211ENST00000554437 TBL1XO60907 577 aa3.47□□□□□ -1.85
SCFD1-211ENST00000554437 RBBP9O75884 186 aa3.47□□□□□ -1.85
SCFD1-211ENST00000554437 OR5F1O95221 314 aa3.47□□□□□ -1.85
SCFD1-211ENST00000554437 TNFAIP8O95379 198 aa3.47□□□□□ -1.85
SCFD1-211ENST00000554437 TDP2O95551 362 aa3.47□□□□□ -1.85
SCFD1-211ENST00000554437 IGHV2-5P01817 119 aa3.47□□□□□ -1.85
SCFD1-211ENST00000554437 DUX4L2P0CJ85 424 aa3.47□□□□□ -1.85
SCFD1-211ENST00000554437 DUX4L3P0CJ86 424 aa3.47□□□□□ -1.85
SCFD1-211ENST00000554437 DUX4L5P0CJ88 424 aa3.47□□□□□ -1.85
SCFD1-211ENST00000554437 DUX4L6P0CJ89 424 aa3.47□□□□□ -1.85
SCFD1-211ENST00000554437 DUX4L7P0CJ90 424 aa3.47□□□□□ -1.85
SCFD1-211ENST00000554437 PET100P0DJ07 73 aa3.47□□□□□ -1.85
SCFD1-211ENST00000554437 VDAC1P21796 283 aa3.47□□□□□ -1.85
SCFD1-211ENST00000554437 ADORA2BP29275 332 aa3.47□□□□□ -1.85
SCFD1-211ENST00000554437 CEACAM3P40198 252 aa3.47□□□□□ -1.85
SCFD1-211ENST00000554437 RBM34P42696 430 aaKnown RBP3.47□□□□□ -1.85
SCFD1-211ENST00000554437 GPM6AP51674 278 aa3.47□□□□□ -1.85
SCFD1-211ENST00000554437 CCR8P51685 355 aa3.47□□□□□ -1.85
SCFD1-211ENST00000554437 XKP51811 444 aa3.47□□□□□ -1.85
SCFD1-211ENST00000554437 STXBP1P61764 594 aaKnown RBP3.47□□□□□ -1.85
SCFD1-211ENST00000554437 SLC35B1P78383 322 aa3.47□□□□□ -1.85
SCFD1-211ENST00000554437 IFFO1Q0D2I5 559 aa3.47□□□□□ -1.85
SCFD1-211ENST00000554437 MADCAM1Q13477 382 aa3.47□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms