RNA–Protein interactions for RNA: ENST00000554429.5

PRPF39-206, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 5

Gene PRPF39, Length 2,977 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-206ENST00000554429 NHLH2Q02577 135 aa2.41□□□□□ -2.02
PRPF39-206ENST00000554429 SLC25A11Q02978 314 aaKnown RBP2.41□□□□□ -2.02
PRPF39-206ENST00000554429 SLC10A7Q0GE19 358 aa2.41□□□□□ -2.02
PRPF39-206ENST00000554429 INPP5JQ15735 1006 aaPredicted RBP2.41□□□□□ -2.02
PRPF39-206ENST00000554429 ZNF750Q32MQ0 723 aa2.41□□□□□ -2.02
PRPF39-206ENST00000554429 ACSM3Q53FZ2 586 aa2.41□□□□□ -2.02
PRPF39-206ENST00000554429 SAMD4BQ5PRF9 694 aaKnown RBP2.41□□□□□ -2.02
PRPF39-206ENST00000554429 UTF1Q5T230 341 aa2.41□□□□□ -2.02
PRPF39-206ENST00000554429 UBE2UQ5VVX9 321 aa2.41□□□□□ -2.02
PRPF39-206ENST00000554429 NSUN5P2Q63ZY6 315 aa2.41□□□□□ -2.02
PRPF39-206ENST00000554429 ZNF324BQ6AW86 544 aaPredicted RBP2.41□□□□□ -2.02
PRPF39-206ENST00000554429 CYP2R1Q6VVX0 501 aa2.41□□□□□ -2.02
PRPF39-206ENST00000554429 RNF111Q6ZNA4 994 aa2.41□□□□□ -2.02
PRPF39-206ENST00000554429 FCRLAQ7L513 359 aa2.41□□□□□ -2.02
PRPF39-206ENST00000554429 PIWIL4Q7Z3Z4 852 aaKnown RBP2.41□□□□□ -2.02
PRPF39-206ENST00000554429 NUFIP2Q7Z417 695 aaKnown RBP2.41□□□□□ -2.02
PRPF39-206ENST00000554429 AMIGO2Q86SJ2 522 aa2.41□□□□□ -2.02
PRPF39-206ENST00000554429 HAPLN4Q86UW8 402 aa2.41□□□□□ -2.02
PRPF39-206ENST00000554429 ZC3HC1Q86WB0 502 aaKnown RBP2.41□□□□□ -2.02
PRPF39-206ENST00000554429 GPSM1Q86YR5 675 aa2.41□□□□□ -2.02
PRPF39-206ENST00000554429 SYS1Q8N2H4 156 aa2.41□□□□□ -2.02
PRPF39-206ENST00000554429 TMEM217Q8N7C4 229 aa2.41□□□□□ -2.02
PRPF39-206ENST00000554429 GATSQ8NAP1 163 aa2.41□□□□□ -2.02
PRPF39-206ENST00000554429 OR9Q2Q8NGE9 314 aa2.41□□□□□ -2.02
PRPF39-206ENST00000554429 OR9A4Q8NGU2 314 aa2.41□□□□□ -2.02
PRPF39-206ENST00000554429 OR6K3Q8NGY3 331 aa2.41□□□□□ -2.02
PRPF39-206ENST00000554429 WDR20Q8TBZ3 569 aa2.41□□□□□ -2.02
PRPF39-206ENST00000554429 M1APQ8TC57 530 aa2.41□□□□□ -2.02
PRPF39-206ENST00000554429 C2CD4CQ8TF44 421 aa2.41□□□□□ -2.02
PRPF39-206ENST00000554429 NAT14Q8WUY8 206 aa2.41□□□□□ -2.02
PRPF39-206ENST00000554429 C10orf82Q8WW14 230 aa2.41□□□□□ -2.02
PRPF39-206ENST00000554429 TMEM234Q8WY98 164 aa2.41□□□□□ -2.02
PRPF39-206ENST00000554429 PIK3R3Q92569 461 aa2.41□□□□□ -2.02
PRPF39-206ENST00000554429 NPIPB3Q92617 1050 aa2.41□□□□□ -2.02
PRPF39-206ENST00000554429 ANKRD9Q96BM1 317 aaPredicted RBP2.41□□□□□ -2.02
PRPF39-206ENST00000554429 ZNF501Q96CX3 271 aaPredicted RBP2.41□□□□□ -2.02
PRPF39-206ENST00000554429 MAGEB18Q96M61 343 aa2.41□□□□□ -2.02
PRPF39-206ENST00000554429 STACQ99469 402 aa2.41□□□□□ -2.02
PRPF39-206ENST00000554429 DDOQ99489 341 aa2.41□□□□□ -2.02
PRPF39-206ENST00000554429 PHB2Q99623 299 aa2.41□□□□□ -2.02
PRPF39-206ENST00000554429 ZNF670Q9BS34 389 aa2.41□□□□□ -2.02
PRPF39-206ENST00000554429 ATG101Q9BSB4 218 aa2.41□□□□□ -2.02
PRPF39-206ENST00000554429 BARHL1Q9BZE3 327 aa2.41□□□□□ -2.02
PRPF39-206ENST00000554429 PPA2Q9H2U2 334 aa2.41□□□□□ -2.02
PRPF39-206ENST00000554429 Q9N2J8 555 aa2.41□□□□□ -2.02
PRPF39-206ENST00000554429 BIN3Q9NQY0 253 aa2.41□□□□□ -2.02
PRPF39-206ENST00000554429 INPP5EQ9NRR6 644 aa2.41□□□□□ -2.02
PRPF39-206ENST00000554429 TREM2Q9NZC2 230 aa2.41□□□□□ -2.02
PRPF39-206ENST00000554429 GHRLQ9UBU3 117 aa2.41□□□□□ -2.02
PRPF39-206ENST00000554429 ZNF346Q9UL40 294 aaKnown RBP2.41□□□□□ -2.02
PRPF39-206ENST00000554429 LAMA5O15230 3695 aa2.41□□□□□ -2.02
PRPF39-206ENST00000554429 FER1L5A0AVI2 2057 aa2.4□□□□□ -2.02
PRPF39-206ENST00000554429 SAGE2PA6NJ88 616 aa2.4□□□□□ -2.02
PRPF39-206ENST00000554429 G3V2T6 193 aa2.4□□□□□ -2.02
PRPF39-206ENST00000554429 H3BSA7 217 aa2.4□□□□□ -2.02
PRPF39-206ENST00000554429 PHYHO14832 338 aa2.4□□□□□ -2.02
PRPF39-206ENST00000554429 PPP1R2P9O14990 202 aa2.4□□□□□ -2.02
PRPF39-206ENST00000554429 PRKYO43930 277 aa2.4□□□□□ -2.02
PRPF39-206ENST00000554429 SEMA7AO75326 666 aa2.4□□□□□ -2.02
PRPF39-206ENST00000554429 TSPAN12O95859 305 aa2.4□□□□□ -2.02
PRPF39-206ENST00000554429 HTR1AP08908 422 aa2.4□□□□□ -2.02
PRPF39-206ENST00000554429 OR8U9P0C7N5 309 aa2.4□□□□□ -2.02
PRPF39-206ENST00000554429 NMBRP28336 390 aa2.4□□□□□ -2.02
PRPF39-206ENST00000554429 EPHA2P29317 976 aa2.4□□□□□ -2.02
PRPF39-206ENST00000554429 MIPP30301 263 aa2.4□□□□□ -2.02
PRPF39-206ENST00000554429 YAP1P46937 504 aaKnown RBP2.4□□□□□ -2.02
PRPF39-206ENST00000554429 GABRA4P48169 554 aa2.4□□□□□ -2.02
PRPF39-206ENST00000554429 RBP2P50120 134 aa2.4□□□□□ -2.02
PRPF39-206ENST00000554429 UGT2B15P54855 530 aa2.4□□□□□ -2.02
PRPF39-206ENST00000554429 CDH12P55289 794 aa2.4□□□□□ -2.02
PRPF39-206ENST00000554429 MTCP1P56278 107 aa2.4□□□□□ -2.02
PRPF39-206ENST00000554429 TAS2R39P59534 338 aa2.4□□□□□ -2.02
PRPF39-206ENST00000554429 ITGA9Q13797 1035 aa2.4□□□□□ -2.02
PRPF39-206ENST00000554429 DPYSL3Q14195 570 aa2.4□□□□□ -2.02
PRPF39-206ENST00000554429 PRPSAP1Q14558 356 aa2.4□□□□□ -2.02
PRPF39-206ENST00000554429 IHHQ14623 411 aa2.4□□□□□ -2.02
PRPF39-206ENST00000554429 NEDD8Q15843 81 aa2.4□□□□□ -2.02
PRPF39-206ENST00000554429 CTU2Q2VPK5 515 aaKnown RBP2.4□□□□□ -2.02
PRPF39-206ENST00000554429 ESCO2Q56NI9 601 aa2.4□□□□□ -2.02
PRPF39-206ENST00000554429 C6orf226Q5I0X4 101 aa2.4□□□□□ -2.02
PRPF39-206ENST00000554429 RBM48Q5RL73 367 aaKnown RBP2.4□□□□□ -2.02
PRPF39-206ENST00000554429 IDNKQ5T6J7 187 aa2.4□□□□□ -2.02
PRPF39-206ENST00000554429 WDR25Q64LD2 544 aaPredicted RBP2.4□□□□□ -2.02
PRPF39-206ENST00000554429 SAXO2Q658L1 398 aa2.4□□□□□ -2.02
PRPF39-206ENST00000554429 OR4F3Q6IEY1 312 aa2.4□□□□□ -2.02
PRPF39-206ENST00000554429 CAPN13Q6MZZ7 669 aaPredicted RBP2.4□□□□□ -2.02
PRPF39-206ENST00000554429 NIPAL3Q6P499 406 aa2.4□□□□□ -2.02
PRPF39-206ENST00000554429 FAM159AQ6UWV7 190 aa2.4□□□□□ -2.02
PRPF39-206ENST00000554429 IL17RELQ6ZVW7 336 aa2.4□□□□□ -2.02
PRPF39-206ENST00000554429 NRARPQ7Z6K4 114 aa2.4□□□□□ -2.02
PRPF39-206ENST00000554429 CMC1Q7Z7K0 106 aa2.4□□□□□ -2.02
PRPF39-206ENST00000554429 TMEM135Q86UB9 458 aa2.4□□□□□ -2.02
PRPF39-206ENST00000554429 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP2.4□□□□□ -2.02
PRPF39-206ENST00000554429 DEFB107AQ8IZN7 70 aa2.4□□□□□ -2.02
PRPF39-206ENST00000554429 SMIM20Q8N5G0 67 aa2.4□□□□□ -2.02
PRPF39-206ENST00000554429 ARRDC1Q8N5I2 433 aa2.4□□□□□ -2.02
PRPF39-206ENST00000554429 OR2AK2Q8NG84 335 aa2.4□□□□□ -2.02
PRPF39-206ENST00000554429 OR10X1Q8NGY0 326 aa2.4□□□□□ -2.02
PRPF39-206ENST00000554429 TMEM239Q8WW34 195 aa2.4□□□□□ -2.02
PRPF39-206ENST00000554429 FKBP10Q96AY3 582 aa2.4□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 97.2 ms