RNA–Protein interactions for RNA: ENST00000554264.5

VPS33B-203, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

TSL 4

Gene VPS33B, Length 389 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-203ENST00000554264 SCGNO76038 276 aa5.31□□□□□ -1.56
VPS33B-203ENST00000554264 MPC2O95563 127 aa5.31□□□□□ -1.56
VPS33B-203ENST00000554264 PMS2P2O95744 297 aa5.31□□□□□ -1.56
VPS33B-203ENST00000554264 FSHBP01225 129 aa5.31□□□□□ -1.56
VPS33B-203ENST00000554264 MT-ND4P03905 459 aa5.31□□□□□ -1.56
VPS33B-203ENST00000554264 ELANEP08246 267 aa5.31□□□□□ -1.56
VPS33B-203ENST00000554264 CHRM5P08912 532 aaPredicted RBP5.31□□□□□ -1.56
VPS33B-203ENST00000554264 HOXC4P09017 264 aaPredicted RBP5.31□□□□□ -1.56
VPS33B-203ENST00000554264 CD3GP09693 182 aa5.31□□□□□ -1.56
VPS33B-203ENST00000554264 TFPIP10646 304 aa5.31□□□□□ -1.56
VPS33B-203ENST00000554264 MGMTP16455 207 aa5.31□□□□□ -1.56
VPS33B-203ENST00000554264 POU6F2P78424 691 aaPredicted RBP5.31□□□□□ -1.56
VPS33B-203ENST00000554264 S100A12P80511 92 aa5.31□□□□□ -1.56
VPS33B-203ENST00000554264 RASGEF1BQ0VAM2 473 aa5.31□□□□□ -1.56
VPS33B-203ENST00000554264 KLRB1Q12918 225 aa5.31□□□□□ -1.56
VPS33B-203ENST00000554264 BIKQ13323 160 aa5.31□□□□□ -1.56
VPS33B-203ENST00000554264 CRMP1Q14194 572 aa5.31□□□□□ -1.56
VPS33B-203ENST00000554264 ZNF267Q14586 743 aaPredicted RBP5.31□□□□□ -1.56
VPS33B-203ENST00000554264 ZNHIT3Q15649 155 aaPredicted RBP5.31□□□□□ -1.56
VPS33B-203ENST00000554264 RPE65Q16518 533 aa5.31□□□□□ -1.56
VPS33B-203ENST00000554264 Q499Y3 187 aa5.31□□□□□ -1.56
VPS33B-203ENST00000554264 DCST2Q5T1A1 773 aa5.31□□□□□ -1.56
VPS33B-203ENST00000554264 RGS7BPQ6MZT1 257 aaPredicted RBP5.31□□□□□ -1.56
VPS33B-203ENST00000554264 ULK3Q6PHR2 472 aa5.31□□□□□ -1.56
VPS33B-203ENST00000554264 GSG1LQ6UXU4 331 aa5.31□□□□□ -1.56
VPS33B-203ENST00000554264 UTS2BQ765I0 119 aa5.31□□□□□ -1.56
VPS33B-203ENST00000554264 RHOUQ7L0Q8 258 aa5.31□□□□□ -1.56
VPS33B-203ENST00000554264 SLC35F2Q8IXU6 374 aa5.31□□□□□ -1.56
VPS33B-203ENST00000554264 COX18Q8N8Q8 333 aa5.31□□□□□ -1.56
VPS33B-203ENST00000554264 OR9A2Q8NGT5 310 aa5.31□□□□□ -1.56
VPS33B-203ENST00000554264 OR10Z1Q8NGY1 313 aa5.31□□□□□ -1.56
VPS33B-203ENST00000554264 OR6N1Q8NGY5 312 aa5.31□□□□□ -1.56
VPS33B-203ENST00000554264 OR51Q1Q8NH59 317 aa5.31□□□□□ -1.56
VPS33B-203ENST00000554264 LGALS14Q8TCE9 139 aa5.31□□□□□ -1.56
VPS33B-203ENST00000554264 SLC25A43Q8WUT9 341 aaPredicted RBP5.31□□□□□ -1.56
VPS33B-203ENST00000554264 THEM6Q8WUY1 208 aa5.31□□□□□ -1.56
VPS33B-203ENST00000554264 PELI1Q96FA3 418 aa5.31□□□□□ -1.56
VPS33B-203ENST00000554264 ELMOD3Q96FG2 381 aa5.31□□□□□ -1.56
VPS33B-203ENST00000554264 SLC35A4Q96G79 324 aa5.31□□□□□ -1.56
VPS33B-203ENST00000554264 C16orf58Q96GQ5 468 aa5.31□□□□□ -1.56
VPS33B-203ENST00000554264 SFXN2Q96NB2 322 aa5.31□□□□□ -1.56
VPS33B-203ENST00000554264 IL17FQ96PD4 163 aa5.31□□□□□ -1.56
VPS33B-203ENST00000554264 TAAR9Q96RI9 348 aa5.31□□□□□ -1.56
VPS33B-203ENST00000554264 SLC25A21Q9BQT8 299 aaPredicted RBP5.31□□□□□ -1.56
VPS33B-203ENST00000554264 WFDC6Q9BQY6 131 aa5.31□□□□□ -1.56
VPS33B-203ENST00000554264 POTEKPQ9BYX7 375 aa5.31□□□□□ -1.56
VPS33B-203ENST00000554264 COMMD4Q9H0A8 199 aa5.31□□□□□ -1.56
VPS33B-203ENST00000554264 ST6GALNAC1Q9NSC7 600 aaPredicted RBP5.31□□□□□ -1.56
VPS33B-203ENST00000554264 C5AR2Q9P296 337 aa5.31□□□□□ -1.56
VPS33B-203ENST00000554264 ZNF69Q9UC07 566 aa5.31□□□□□ -1.56
VPS33B-203ENST00000554264 ICAM5Q9UMF0 924 aa5.31□□□□□ -1.56
VPS33B-203ENST00000554264 RCE1Q9Y256 329 aa5.31□□□□□ -1.56
VPS33B-203ENST00000554264 SLC17A4Q9Y2C5 497 aa5.31□□□□□ -1.56
VPS33B-203ENST00000554264 ZNF337Q9Y3M9 751 aa5.31□□□□□ -1.56
VPS33B-203ENST00000554264 SIRT4Q9Y6E7 314 aaPredicted RBP5.31□□□□□ -1.56
VPS33B-203ENST00000554264 COL12A1Q99715 3063 aa5.31□□□□□ -1.56
VPS33B-203ENST00000554264 TLN1Q9Y490 2541 aaKnown RBP5.31□□□□□ -1.56
VPS33B-203ENST00000554264 TDRD6O60522 2096 aaKnown RBP5.3□□□□□ -1.56
VPS33B-203ENST00000554264 FEZF1A0PJY2 475 aa5.3□□□□□ -1.56
VPS33B-203ENST00000554264 RFPL4AA6NLU0 287 aa5.3□□□□□ -1.56
VPS33B-203ENST00000554264 TMEM212A6NML5 194 aa5.3□□□□□ -1.56
VPS33B-203ENST00000554264 RFPL4AL1F8VTS6 287 aa5.3□□□□□ -1.56
VPS33B-203ENST00000554264 H7C417 338 aa5.3□□□□□ -1.56
VPS33B-203ENST00000554264 TRIM77I1YAP6 450 aa5.3□□□□□ -1.56
VPS33B-203ENST00000554264 ARPC1BO15143 372 aaKnown RBP5.3□□□□□ -1.56
VPS33B-203ENST00000554264 XRCC3O43542 346 aa5.3□□□□□ -1.56
VPS33B-203ENST00000554264 NUDT21O43809 227 aaKnown RBP5.3□□□□□ -1.56
VPS33B-203ENST00000554264 LCMT2O60294 686 aaKnown RBP5.3□□□□□ -1.56
VPS33B-203ENST00000554264 PIP5K1CO60331 668 aa5.3□□□□□ -1.56
VPS33B-203ENST00000554264 CDC40O60508 579 aaKnown RBP eCLIP5.3□□□□□ -1.56
VPS33B-203ENST00000554264 CTNSO60931 367 aa5.3□□□□□ -1.56
VPS33B-203ENST00000554264 GLCEO94923 617 aa5.3□□□□□ -1.56
VPS33B-203ENST00000554264 OR2F2O95006 317 aa5.3□□□□□ -1.56
VPS33B-203ENST00000554264 AGFG2O95081 481 aa5.3□□□□□ -1.56
VPS33B-203ENST00000554264 LYPD3O95274 346 aa5.3□□□□□ -1.56
VPS33B-203ENST00000554264 IL33O95760 270 aa5.3□□□□□ -1.56
VPS33B-203ENST00000554264 NMBP08949 121 aa5.3□□□□□ -1.56
VPS33B-203ENST00000554264 AKAIN1P0CW23 69 aa5.3□□□□□ -1.56
VPS33B-203ENST00000554264 PF4V1P10720 104 aa5.3□□□□□ -1.56
VPS33B-203ENST00000554264 PNMTP11086 282 aa5.3□□□□□ -1.56
VPS33B-203ENST00000554264 CPMP14384 443 aa5.3□□□□□ -1.56
VPS33B-203ENST00000554264 GABRA1P14867 456 aa5.3□□□□□ -1.56
VPS33B-203ENST00000554264 MAKP20794 623 aa5.3□□□□□ -1.56
VPS33B-203ENST00000554264 EDNRAP25101 427 aa5.3□□□□□ -1.56
VPS33B-203ENST00000554264 DPP4P27487 766 aa5.3□□□□□ -1.56
VPS33B-203ENST00000554264 ACVR1BP36896 505 aa5.3□□□□□ -1.56
VPS33B-203ENST00000554264 SRP9P49458 86 aaKnown RBP5.3□□□□□ -1.56
VPS33B-203ENST00000554264 VEGFCP49767 419 aa5.3□□□□□ -1.56
VPS33B-203ENST00000554264 CCR6P51684 374 aa5.3□□□□□ -1.56
VPS33B-203ENST00000554264 OR10A3P58181 314 aa5.3□□□□□ -1.56
VPS33B-203ENST00000554264 OR12D2P58182 307 aa5.3□□□□□ -1.56
VPS33B-203ENST00000554264 VSX2P58304 361 aaPredicted RBP5.3□□□□□ -1.56
VPS33B-203ENST00000554264 ZP1P60852 638 aa5.3□□□□□ -1.56
VPS33B-203ENST00000554264 SRSF4Q08170 494 aaKnown RBP5.3□□□□□ -1.56
VPS33B-203ENST00000554264 FOXD4Q12950 439 aaPredicted RBP5.3□□□□□ -1.56
VPS33B-203ENST00000554264 OR2F1Q13607 317 aa5.3□□□□□ -1.56
VPS33B-203ENST00000554264 ZNF273Q14593 569 aa5.3□□□□□ -1.56
VPS33B-203ENST00000554264 NFATC4Q14934 902 aa5.3□□□□□ -1.56
VPS33B-203ENST00000554264 ALG11Q2TAA5 492 aa5.3□□□□□ -1.56
VPS33B-203ENST00000554264 SLC25A35Q3KQZ1 300 aa5.3□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms