RNA–Protein interactions for RNA: ENST00000554074.1

SLIRP-203, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 3

Gene SLIRP, Length 445 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-203ENST00000554074 CADM1Q9BY67 442 aaKnown RBP5.61□□□□□ -1.51
SLIRP-203ENST00000554074 OR2J1Q9GZK6 312 aa5.61□□□□□ -1.51
SLIRP-203ENST00000554074 NARFLQ9H6Q4 476 aa5.61□□□□□ -1.51
SLIRP-203ENST00000554074 METTL17Q9H7H0 456 aaPredicted RBP5.61□□□□□ -1.51
SLIRP-203ENST00000554074 NMNAT1Q9HAN9 279 aaPredicted RBP5.61□□□□□ -1.51
SLIRP-203ENST00000554074 IL1RAPQ9NPH3 570 aa5.61□□□□□ -1.51
SLIRP-203ENST00000554074 GRHPRQ9UBQ7 328 aa5.61□□□□□ -1.51
SLIRP-203ENST00000554074 EGFL7Q9UHF1 273 aa5.61□□□□□ -1.51
SLIRP-203ENST00000554074 ATPIF1Q9UII2 106 aa5.61□□□□□ -1.51
SLIRP-203ENST00000554074 ENPP4Q9Y6X5 453 aa5.61□□□□□ -1.51
SLIRP-203ENST00000554074 TEX13CA0A0J9YWL9 993 aa5.6□□□□□ -1.51
SLIRP-203ENST00000554074 A0A1W2PPL8 197 aa5.6□□□□□ -1.51
SLIRP-203ENST00000554074 PRSS37A4D1T9 235 aa5.6□□□□□ -1.51
SLIRP-203ENST00000554074 ZSCAN5BA6NJL1 495 aa5.6□□□□□ -1.51
SLIRP-203ENST00000554074 J3KTA2 159 aa5.6□□□□□ -1.51
SLIRP-203ENST00000554074 XKRYO14609 159 aa5.6□□□□□ -1.51
SLIRP-203ENST00000554074 CDC42EP2O14613 210 aa5.6□□□□□ -1.51
SLIRP-203ENST00000554074 SPRY3O43610 288 aa5.6□□□□□ -1.51
SLIRP-203ENST00000554074 PLPP2O43688 288 aa5.6□□□□□ -1.51
SLIRP-203ENST00000554074 PTP4A3O75365 173 aa5.6□□□□□ -1.51
SLIRP-203ENST00000554074 CIB2O75838 187 aa5.6□□□□□ -1.51
SLIRP-203ENST00000554074 MPZL1O95297 269 aa5.6□□□□□ -1.51
SLIRP-203ENST00000554074 ZNF682O95780 498 aa5.6□□□□□ -1.51
SLIRP-203ENST00000554074 ABHD16AO95870 558 aa5.6□□□□□ -1.51
SLIRP-203ENST00000554074 NGFP01138 241 aa5.6□□□□□ -1.51
SLIRP-203ENST00000554074 SEMG1P04279 462 aa5.6□□□□□ -1.51
SLIRP-203ENST00000554074 RAP2AP10114 183 aa5.6□□□□□ -1.51
SLIRP-203ENST00000554074 TNFRSF1AP19438 455 aa5.6□□□□□ -1.51
SLIRP-203ENST00000554074 KITLGP21583 273 aa5.6□□□□□ -1.51
SLIRP-203ENST00000554074 FUT4P22083 530 aa5.6□□□□□ -1.51
SLIRP-203ENST00000554074 CPT2P23786 658 aa5.6□□□□□ -1.51
SLIRP-203ENST00000554074 SDHAP31040 664 aa5.6□□□□□ -1.51
SLIRP-203ENST00000554074 RPL4P36578 427 aaKnown RBP5.6□□□□□ -1.51
SLIRP-203ENST00000554074 YAP1P46937 504 aaKnown RBP5.6□□□□□ -1.51
SLIRP-203ENST00000554074 LIMS1P48059 325 aa5.6□□□□□ -1.51
SLIRP-203ENST00000554074 COMPP49747 757 aaPredicted RBP5.6□□□□□ -1.51
SLIRP-203ENST00000554074 HILS1P60008 231 aa5.6□□□□□ -1.51
SLIRP-203ENST00000554074 LSM6P62312 80 aaKnown RBP5.6□□□□□ -1.51
SLIRP-203ENST00000554074 SRSF2Q01130 221 aaKnown RBP5.6□□□□□ -1.51
SLIRP-203ENST00000554074 MVKQ03426 396 aa5.6□□□□□ -1.51
SLIRP-203ENST00000554074 PSG7Q13046 419 aa5.6□□□□□ -1.51
SLIRP-203ENST00000554074 CDK5R2Q13319 367 aa5.6□□□□□ -1.51
SLIRP-203ENST00000554074 AQP6Q13520 282 aa5.6□□□□□ -1.51
SLIRP-203ENST00000554074 FLOT2Q14254 428 aa5.6□□□□□ -1.51
SLIRP-203ENST00000554074 KCNMB1Q16558 191 aa5.6□□□□□ -1.51
SLIRP-203ENST00000554074 TSTQ16762 297 aaKnown RBP5.6□□□□□ -1.51
SLIRP-203ENST00000554074 MESTQ5EB52 335 aa5.6□□□□□ -1.51
SLIRP-203ENST00000554074 SPATA46Q5T0L3 261 aa5.6□□□□□ -1.51
SLIRP-203ENST00000554074 AVPI1Q5T686 147 aa5.6□□□□□ -1.51
SLIRP-203ENST00000554074 ZNF774Q6NX45 483 aa5.6□□□□□ -1.51
SLIRP-203ENST00000554074 FAHD2BQ6P2I3 314 aaPredicted RBP5.6□□□□□ -1.51
SLIRP-203ENST00000554074 C1orf229Q6ZS94 237 aaPredicted RBP5.6□□□□□ -1.51
SLIRP-203ENST00000554074 RRM2BQ7LG56 351 aa5.6□□□□□ -1.51
SLIRP-203ENST00000554074 C1QL2Q7Z5L3 287 aa5.6□□□□□ -1.51
SLIRP-203ENST00000554074 PEG10Q86TG7 708 aaKnown RBP5.6□□□□□ -1.51
SLIRP-203ENST00000554074 ADCK1Q86TW2 530 aa5.6□□□□□ -1.51
SLIRP-203ENST00000554074 IGFN1Q86VF2 1251 aa5.6□□□□□ -1.51
SLIRP-203ENST00000554074 LINC00471Q8N535 108 aa5.6□□□□□ -1.51
SLIRP-203ENST00000554074 RNF148Q8N7C7 305 aa5.6□□□□□ -1.51
SLIRP-203ENST00000554074 SLC7A13Q8TCU3 470 aa5.6□□□□□ -1.51
SLIRP-203ENST00000554074 GTF3AQ92664 365 aaKnown RBP5.6□□□□□ -1.51
SLIRP-203ENST00000554074 FAHD2AQ96GK7 314 aa5.6□□□□□ -1.51
SLIRP-203ENST00000554074 HSH2DQ96JZ2 352 aa5.6□□□□□ -1.51
SLIRP-203ENST00000554074 C7orf34Q96L11 122 aa5.6□□□□□ -1.51
SLIRP-203ENST00000554074 Q96M85 177 aa5.6□□□□□ -1.51
SLIRP-203ENST00000554074 ZNF570Q96NI8 536 aa5.6□□□□□ -1.51
SLIRP-203ENST00000554074 JMJD8Q96S16 334 aa5.6□□□□□ -1.51
SLIRP-203ENST00000554074 TMPRSS13Q9BYE2 586 aa5.6□□□□□ -1.51
SLIRP-203ENST00000554074 LPAR2Q9HBW0 351 aa5.6□□□□□ -1.51
SLIRP-203ENST00000554074 KRCC1Q9NPI7 259 aaPredicted RBP5.6□□□□□ -1.51
SLIRP-203ENST00000554074 NRIP3Q9NQ35 241 aa5.6□□□□□ -1.51
SLIRP-203ENST00000554074 VSX1Q9NZR4 365 aaPredicted RBP5.6□□□□□ -1.51
SLIRP-203ENST00000554074 RHCGQ9UBD6 479 aa5.6□□□□□ -1.51
SLIRP-203ENST00000554074 SIGLEC7Q9Y286 467 aa5.6□□□□□ -1.51
SLIRP-203ENST00000554074 POLR3KQ9Y2Y1 108 aaPredicted RBP5.6□□□□□ -1.51
SLIRP-203ENST00000554074 CACNG2Q9Y698 323 aa5.6□□□□□ -1.51
SLIRP-203ENST00000554074 TCRBV5S2A0A599 114 aa5.59□□□□□ -1.51
SLIRP-203ENST00000554074 TCRBV3S1A0A5B6 114 aa5.59□□□□□ -1.51
SLIRP-203ENST00000554074 OR6C6A6NF89 314 aa5.59□□□□□ -1.51
SLIRP-203ENST00000554074 IFNL4K9M1U5 179 aa5.59□□□□□ -1.51
SLIRP-203ENST00000554074 SURF4O15260 269 aa5.59□□□□□ -1.51
SLIRP-203ENST00000554074 SGCEO43556 437 aa5.59□□□□□ -1.51
SLIRP-203ENST00000554074 TIMM8AO60220 97 aaPredicted RBP5.59□□□□□ -1.51
SLIRP-203ENST00000554074 DOK2O60496 412 aa5.59□□□□□ -1.51
SLIRP-203ENST00000554074 KHDRBS3O75525 346 aaKnown RBP5.59□□□□□ -1.51
SLIRP-203ENST00000554074 FOXH1O75593 365 aa5.59□□□□□ -1.51
SLIRP-203ENST00000554074 NDUFB2O95178 105 aa5.59□□□□□ -1.51
SLIRP-203ENST00000554074 VENTXO95231 258 aa5.59□□□□□ -1.51
SLIRP-203ENST00000554074 FSTL3O95633 263 aa5.59□□□□□ -1.51
SLIRP-203ENST00000554074 TXNDC12O95881 172 aa5.59□□□□□ -1.51
SLIRP-203ENST00000554074 AVPP01185 164 aa5.59□□□□□ -1.51
SLIRP-203ENST00000554074 FSHBP01225 129 aa5.59□□□□□ -1.51
SLIRP-203ENST00000554074 IGHV2-70P01814 119 aa5.59□□□□□ -1.51
SLIRP-203ENST00000554074 FABP3P05413 133 aa5.59□□□□□ -1.51
SLIRP-203ENST00000554074 H1F0P07305 194 aaKnown RBP5.59□□□□□ -1.51
SLIRP-203ENST00000554074 RAC2P15153 192 aa5.59□□□□□ -1.51
SLIRP-203ENST00000554074 NCK1P16333 377 aa5.59□□□□□ -1.51
SLIRP-203ENST00000554074 CTLA4P16410 223 aa5.59□□□□□ -1.51
SLIRP-203ENST00000554074 ZNF26P17031 533 aaPredicted RBP5.59□□□□□ -1.51
SLIRP-203ENST00000554074 EPHA1P21709 976 aa5.59□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms