RNA–Protein interactions for RNA: ENST00000553693.5

SCFD1-210, Transcript of sec1 family domain containing 1, humanhuman

TSL 3

Gene SCFD1, Length 490 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-210ENST00000553693 C9orf135Q5VTT2 229 aa2.26□□□□□ -2.05
SCFD1-210ENST00000553693 TIGD3Q6B0B8 471 aa2.26□□□□□ -2.05
SCFD1-210ENST00000553693 SLC8B1Q6J4K2 584 aa2.26□□□□□ -2.05
SCFD1-210ENST00000553693 UQCC3Q6UW78 93 aa2.26□□□□□ -2.05
SCFD1-210ENST00000553693 TRIM69Q86WT6 500 aa2.26□□□□□ -2.05
SCFD1-210ENST00000553693 PSTKQ8IV42 348 aaKnown RBP2.26□□□□□ -2.05
SCFD1-210ENST00000553693 SKA3Q8IX90 412 aa2.26□□□□□ -2.05
SCFD1-210ENST00000553693 LYPD1Q8N2G4 141 aa2.26□□□□□ -2.05
SCFD1-210ENST00000553693 OR2L13Q8N349 312 aa2.26□□□□□ -2.05
SCFD1-210ENST00000553693 C20orf203Q8NBC4 194 aa2.26□□□□□ -2.05
SCFD1-210ENST00000553693 OR52H1Q8NGJ2 320 aa2.26□□□□□ -2.05
SCFD1-210ENST00000553693 PPTC7Q8NI37 304 aa2.26□□□□□ -2.05
SCFD1-210ENST00000553693 TSEN15Q8WW01 171 aaKnown RBP2.26□□□□□ -2.05
SCFD1-210ENST00000553693 DNAJA4Q8WW22 397 aaPredicted RBP2.26□□□□□ -2.05
SCFD1-210ENST00000553693 HIST1H4GQ99525 98 aa2.26□□□□□ -2.05
SCFD1-210ENST00000553693 MCHR1Q99705 422 aa2.26□□□□□ -2.05
SCFD1-210ENST00000553693 NAT9Q9BTE0 207 aa2.26□□□□□ -2.05
SCFD1-210ENST00000553693 SLC17A9Q9BYT1 436 aa2.26□□□□□ -2.05
SCFD1-210ENST00000553693 POLR2J2Q9GZM3 115 aaKnown RBP2.26□□□□□ -2.05
SCFD1-210ENST00000553693 POLR2J3Q9H1A7 115 aaKnown RBP2.26□□□□□ -2.05
SCFD1-210ENST00000553693 GBA3Q9H227 469 aa2.26□□□□□ -2.05
SCFD1-210ENST00000553693 BOLA2Q9H3K6 86 aa2.26□□□□□ -2.05
SCFD1-210ENST00000553693 ANKRD19PQ9H560 264 aa2.26□□□□□ -2.05
SCFD1-210ENST00000553693 FANCEQ9HB96 536 aa2.26□□□□□ -2.05
SCFD1-210ENST00000553693 FOLH1BQ9HBA9 442 aa2.26□□□□□ -2.05
SCFD1-210ENST00000553693 CCNB1IP1Q9NPC3 277 aa2.26□□□□□ -2.05
SCFD1-210ENST00000553693 NECAP2Q9NVZ3 263 aa2.26□□□□□ -2.05
SCFD1-210ENST00000553693 SIGLEC8Q9NYZ4 499 aa2.26□□□□□ -2.05
SCFD1-210ENST00000553693 PISDQ9UG56 409 aa2.26□□□□□ -2.05
SCFD1-210ENST00000553693 DCDC2Q9UHG0 476 aa2.26□□□□□ -2.05
SCFD1-210ENST00000553693 RIMS3Q9UJD0 308 aa2.26□□□□□ -2.05
SCFD1-210ENST00000553693 V9GY05 133 aa2.26□□□□□ -2.05
SCFD1-210ENST00000553693 OTOGLQ3ZCN5 2332 aa2.26□□□□□ -2.05
SCFD1-210ENST00000553693 ASPMQ8IZT6 3477 aa2.25□□□□□ -2.05
SCFD1-210ENST00000553693 FASNP49327 2511 aaKnown RBP2.25□□□□□ -2.05
SCFD1-210ENST00000553693 MYH8P13535 1937 aa2.25□□□□□ -2.05
SCFD1-210ENST00000553693 TTC41PQ6P2S7 1318 aa2.25□□□□□ -2.05
SCFD1-210ENST00000553693 PLXNA4Q9HCM2 1894 aa2.25□□□□□ -2.05
SCFD1-210ENST00000553693 IGHV1OR15-1A0A075B7D0 117 aa2.25□□□□□ -2.05
SCFD1-210ENST00000553693 A0A1B0GWB2 263 aa2.25□□□□□ -2.05
SCFD1-210ENST00000553693 SUPT3HB4E1H0 165 aa2.25□□□□□ -2.05
SCFD1-210ENST00000553693 LOC110117498-PIK3R3F6TDL0 507 aa2.25□□□□□ -2.05
SCFD1-210ENST00000553693 DLGAP1O14490 977 aa2.25□□□□□ -2.05
SCFD1-210ENST00000553693 GOSR2O14653 212 aa2.25□□□□□ -2.05
SCFD1-210ENST00000553693 CLOCKO15516 846 aa2.25□□□□□ -2.05
SCFD1-210ENST00000553693 TMEM50AO95807 157 aa2.25□□□□□ -2.05
SCFD1-210ENST00000553693 CST1P01037 141 aa2.25□□□□□ -2.05
SCFD1-210ENST00000553693 IGHV3-48P01763 117 aa2.25□□□□□ -2.05
SCFD1-210ENST00000553693 C2P06681 752 aa2.25□□□□□ -2.05
SCFD1-210ENST00000553693 ANXA5P08758 320 aa2.25□□□□□ -2.05
SCFD1-210ENST00000553693 RBMY1CP0DJD4 496 aa2.25□□□□□ -2.05
SCFD1-210ENST00000553693 CALM1P0DP23 149 aa2.25□□□□□ -2.05
SCFD1-210ENST00000553693 CALM2P0DP24 149 aa2.25□□□□□ -2.05
SCFD1-210ENST00000553693 CALM3P0DP25 149 aa2.25□□□□□ -2.05
SCFD1-210ENST00000553693 IGLL1P15814 213 aa2.25□□□□□ -2.05
SCFD1-210ENST00000553693 CMA1P23946 247 aa2.25□□□□□ -2.05
SCFD1-210ENST00000553693 CD52P31358 61 aa2.25□□□□□ -2.05
SCFD1-210ENST00000553693 ATP5C1P36542 298 aaKnown RBP2.25□□□□□ -2.05
SCFD1-210ENST00000553693 NUDT1P36639 197 aa2.25□□□□□ -2.05
SCFD1-210ENST00000553693 RPS10P46783 165 aaKnown RBP2.25□□□□□ -2.05
SCFD1-210ENST00000553693 KPNA2P52292 529 aaKnown RBP2.25□□□□□ -2.05
SCFD1-210ENST00000553693 MRPS22P82650 360 aaKnown RBP2.25□□□□□ -2.05
SCFD1-210ENST00000553693 TMED1Q13445 227 aa2.25□□□□□ -2.05
SCFD1-210ENST00000553693 GK3PQ14409 553 aa2.25□□□□□ -2.05
SCFD1-210ENST00000553693 FAM120AOSQ5T036 256 aa2.25□□□□□ -2.05
SCFD1-210ENST00000553693 WDR74Q6RFH5 385 aaPredicted RBP2.25□□□□□ -2.05
SCFD1-210ENST00000553693 ACOT7LQ6ZUV0 252 aa2.25□□□□□ -2.05
SCFD1-210ENST00000553693 SLC26A11Q86WA9 606 aa2.25□□□□□ -2.05
SCFD1-210ENST00000553693 VRK2Q86Y07 508 aa2.25□□□□□ -2.05
SCFD1-210ENST00000553693 SVOPLQ8N434 492 aa2.25□□□□□ -2.05
SCFD1-210ENST00000553693 LIX1Q8N485 282 aa2.25□□□□□ -2.05
SCFD1-210ENST00000553693 TPRX1Q8N7U7 411 aa2.25□□□□□ -2.05
SCFD1-210ENST00000553693 SUMF2Q8NBJ7 301 aa2.25□□□□□ -2.05
SCFD1-210ENST00000553693 SDR9C7Q8NEX9 313 aa2.25□□□□□ -2.05
SCFD1-210ENST00000553693 B3GNT7Q8NFL0 401 aa2.25□□□□□ -2.05
SCFD1-210ENST00000553693 OR7G2Q8NG99 324 aa2.25□□□□□ -2.05
SCFD1-210ENST00000553693 OR4F6Q8NGB9 312 aa2.25□□□□□ -2.05
SCFD1-210ENST00000553693 OR4K14Q8NGD5 310 aa2.25□□□□□ -2.05
SCFD1-210ENST00000553693 OR2G2Q8NGZ5 317 aa2.25□□□□□ -2.05
SCFD1-210ENST00000553693 OR56B4Q8NH76 319 aa2.25□□□□□ -2.05
SCFD1-210ENST00000553693 DNAJB3Q8WWF6 145 aa2.25□□□□□ -2.05
SCFD1-210ENST00000553693 PIBF1Q8WXW3 757 aa2.25□□□□□ -2.05
SCFD1-210ENST00000553693 RDH5Q92781 318 aa2.25□□□□□ -2.05
SCFD1-210ENST00000553693 FGF11Q92914 225 aa2.25□□□□□ -2.05
SCFD1-210ENST00000553693 PAGE5Q96GU1 130 aa2.25□□□□□ -2.05
SCFD1-210ENST00000553693 MTMR9Q96QG7 549 aa2.25□□□□□ -2.05
SCFD1-210ENST00000553693 MFFQ9GZY8 342 aa2.25□□□□□ -2.05
SCFD1-210ENST00000553693 NXF3Q9H4D5 531 aaKnown RBP2.25□□□□□ -2.05
SCFD1-210ENST00000553693 CWH43Q9H720 699 aa2.25□□□□□ -2.05
SCFD1-210ENST00000553693 NIPAL2Q9H841 368 aa2.25□□□□□ -2.05
SCFD1-210ENST00000553693 ZDHHC11Q9H8X9 412 aa2.25□□□□□ -2.05
SCFD1-210ENST00000553693 CRLF2Q9HC73 371 aa2.25□□□□□ -2.05
SCFD1-210ENST00000553693 LZTFL1Q9NQ48 299 aa2.25□□□□□ -2.05
SCFD1-210ENST00000553693 GLRX2Q9NS18 164 aa2.25□□□□□ -2.05
SCFD1-210ENST00000553693 C20orf96Q9NUD7 363 aaPredicted RBP2.25□□□□□ -2.05
SCFD1-210ENST00000553693 LYARQ9NX58 379 aaKnown RBP2.25□□□□□ -2.05
SCFD1-210ENST00000553693 ZNF225Q9UK10 706 aa2.25□□□□□ -2.05
SCFD1-210ENST00000553693 PRG3Q9Y2Y8 225 aaPredicted RBP2.25□□□□□ -2.05
SCFD1-210ENST00000553693 KIAA1671Q9BY89 1806 aa2.25□□□□□ -2.05
SCFD1-210ENST00000553693 GPR179Q6PRD1 2367 aa2.25□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms