RNA–Protein interactions for RNA: ENST00000553617.5

TDP1-207, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 5

Gene TDP1, Length 876 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-207ENST00000553617 NQO1P15559 274 aaKnown RBP3.02□□□□□ -1.93
TDP1-207ENST00000553617 PSMC3P17980 439 aa3.02□□□□□ -1.93
TDP1-207ENST00000553617 SERPINA2P20848 420 aa3.02□□□□□ -1.93
TDP1-207ENST00000553617 BCKDHBP21953 392 aa3.02□□□□□ -1.93
TDP1-207ENST00000553617 IGHV1-2P23083 117 aa3.02□□□□□ -1.93
TDP1-207ENST00000553617 RPL13AP40429 203 aaKnown RBP3.02□□□□□ -1.93
TDP1-207ENST00000553617 RBM34P42696 430 aaKnown RBP3.02□□□□□ -1.93
TDP1-207ENST00000553617 QARSP47897 775 aaKnown RBP3.02□□□□□ -1.93
TDP1-207ENST00000553617 HLCSP50747 726 aa3.02□□□□□ -1.93
TDP1-207ENST00000553617 PKNOX1P55347 436 aa3.02□□□□□ -1.93
TDP1-207ENST00000553617 RPS14P62263 151 aaKnown RBP3.02□□□□□ -1.93
TDP1-207ENST00000553617 LSM6P62312 80 aaKnown RBP3.02□□□□□ -1.93
TDP1-207ENST00000553617 MRPS22P82650 360 aaKnown RBP3.02□□□□□ -1.93
TDP1-207ENST00000553617 TNFRSF9Q07011 255 aa3.02□□□□□ -1.93
TDP1-207ENST00000553617 SELENBP1Q13228 472 aa3.02□□□□□ -1.93
TDP1-207ENST00000553617 GRB7Q14451 532 aa3.02□□□□□ -1.93
TDP1-207ENST00000553617 GPNMBQ14956 572 aa3.02□□□□□ -1.93
TDP1-207ENST00000553617 ZBTB6Q15916 424 aa3.02□□□□□ -1.93
TDP1-207ENST00000553617 TRIM16LQ309B1 348 aa3.02□□□□□ -1.93
TDP1-207ENST00000553617 C9orf135Q5VTT2 229 aa3.02□□□□□ -1.93
TDP1-207ENST00000553617 STUMQ69YW2 141 aa3.02□□□□□ -1.93
TDP1-207ENST00000553617 C22orf42Q6IC83 251 aa3.02□□□□□ -1.93
TDP1-207ENST00000553617 ZNF343Q6P1L6 599 aa3.02□□□□□ -1.93
TDP1-207ENST00000553617 CERS6Q6ZMG9 384 aa3.02□□□□□ -1.93
TDP1-207ENST00000553617 FAM92BQ6ZTR7 304 aa3.02□□□□□ -1.93
TDP1-207ENST00000553617 C3orf62Q6ZUJ4 267 aa3.02□□□□□ -1.93
TDP1-207ENST00000553617 S100A7AQ86SG5 101 aa3.02□□□□□ -1.93
TDP1-207ENST00000553617 SLC47A2Q86VL8 602 aa3.02□□□□□ -1.93
TDP1-207ENST00000553617 HORMAD1Q86X24 394 aa3.02□□□□□ -1.93
TDP1-207ENST00000553617 NAXDQ8IW45 347 aa3.02□□□□□ -1.93
TDP1-207ENST00000553617 SLC35F2Q8IXU6 374 aa3.02□□□□□ -1.93
TDP1-207ENST00000553617 RIBC1Q8N443 379 aaPredicted RBP3.02□□□□□ -1.93
TDP1-207ENST00000553617 TMEM35BQ8NCS4 154 aa3.02□□□□□ -1.93
TDP1-207ENST00000553617 FAM110BQ8TC76 370 aa3.02□□□□□ -1.93
TDP1-207ENST00000553617 RASSF5Q8WWW0 418 aa3.02□□□□□ -1.93
TDP1-207ENST00000553617 BORCS5Q969J3 196 aa3.02□□□□□ -1.93
TDP1-207ENST00000553617 APH1AQ96BI3 265 aa3.02□□□□□ -1.93
TDP1-207ENST00000553617 FAF2Q96CS3 445 aa3.02□□□□□ -1.93
TDP1-207ENST00000553617 MBOAT4Q96T53 435 aa3.02□□□□□ -1.93
TDP1-207ENST00000553617 MCHR1Q99705 422 aa3.02□□□□□ -1.93
TDP1-207ENST00000553617 NIPSNAP1Q9BPW8 284 aa3.02□□□□□ -1.93
TDP1-207ENST00000553617 ULBP1Q9BZM6 244 aa3.02□□□□□ -1.93
TDP1-207ENST00000553617 ZYG11BQ9C0D3 744 aa3.02□□□□□ -1.93
TDP1-207ENST00000553617 SYT4Q9H2B2 425 aa3.02□□□□□ -1.93
TDP1-207ENST00000553617 TRABDQ9H4I3 376 aa3.02□□□□□ -1.93
TDP1-207ENST00000553617 KIR3DX1Q9H7L2 352 aa3.02□□□□□ -1.93
TDP1-207ENST00000553617 PANK3Q9H999 370 aa3.02□□□□□ -1.93
TDP1-207ENST00000553617 PLEKHA1Q9HB21 404 aa3.02□□□□□ -1.93
TDP1-207ENST00000553617 PAK1IP1Q9NWT1 392 aaPredicted RBP3.02□□□□□ -1.93
TDP1-207ENST00000553617 C1orf109Q9NX04 203 aa3.02□□□□□ -1.93
TDP1-207ENST00000553617 DHRS4-AS1Q9P1J3 65 aa3.02□□□□□ -1.93
TDP1-207ENST00000553617 SPRR3Q9UBC9 169 aa3.02□□□□□ -1.93
TDP1-207ENST00000553617 PDE10AQ9Y233 779 aa3.02□□□□□ -1.93
TDP1-207ENST00000553617 ZNF337Q9Y3M9 751 aa3.02□□□□□ -1.93
TDP1-207ENST00000553617 FAM32AQ9Y421 112 aaKnown RBP3.02□□□□□ -1.93
TDP1-207ENST00000553617 PEX16Q9Y5Y5 336 aa3.02□□□□□ -1.93
TDP1-207ENST00000553617 CDH10Q9Y6N8 788 aa3.02□□□□□ -1.93
TDP1-207ENST00000553617 NUP155O75694 1391 aa3.01□□□□□ -1.93
TDP1-207ENST00000553617 UBN2Q6ZU65 1347 aa3.01□□□□□ -1.93
TDP1-207ENST00000553617 PCDH11XQ9BZA7 1347 aa3.01□□□□□ -1.93
TDP1-207ENST00000553617 ZNF98A6NK75 572 aa3.01□□□□□ -1.93
TDP1-207ENST00000553617 ZNF705EA8MWA4 302 aaPredicted RBP3.01□□□□□ -1.93
TDP1-207ENST00000553617 B4DXG7 233 aa3.01□□□□□ -1.93
TDP1-207ENST00000553617 FCN1O00602 326 aa3.01□□□□□ -1.93
TDP1-207ENST00000553617 PRMT5O14744 637 aaPredicted RBP3.01□□□□□ -1.93
TDP1-207ENST00000553617 ACOX3O15254 700 aa3.01□□□□□ -1.93
TDP1-207ENST00000553617 TGOLN2O43493 480 aa3.01□□□□□ -1.93
TDP1-207ENST00000553617 CHST1O43916 411 aa3.01□□□□□ -1.93
TDP1-207ENST00000553617 PRKYO43930 277 aa3.01□□□□□ -1.93
TDP1-207ENST00000553617 DPM1O60762 260 aa3.01□□□□□ -1.93
TDP1-207ENST00000553617 ZNF253O75346 499 aa3.01□□□□□ -1.93
TDP1-207ENST00000553617 GATBO75879 557 aaKnown RBP3.01□□□□□ -1.93
TDP1-207ENST00000553617 LYPD3O95274 346 aa3.01□□□□□ -1.93
TDP1-207ENST00000553617 OXSR1O95747 527 aaPredicted RBP3.01□□□□□ -1.93
TDP1-207ENST00000553617 AP2A1O95782 977 aa3.01□□□□□ -1.93
TDP1-207ENST00000553617 APOC1P02654 83 aa3.01□□□□□ -1.93
TDP1-207ENST00000553617 RNF224P0DH78 156 aa3.01□□□□□ -1.93
TDP1-207ENST00000553617 RNH1P13489 461 aaKnown RBP3.01□□□□□ -1.93
TDP1-207ENST00000553617 KITLGP21583 273 aa3.01□□□□□ -1.93
TDP1-207ENST00000553617 WARSP23381 471 aaKnown RBP3.01□□□□□ -1.93
TDP1-207ENST00000553617 MPIP34949 423 aa3.01□□□□□ -1.93
TDP1-207ENST00000553617 CSKP41240 450 aa3.01□□□□□ -1.93
TDP1-207ENST00000553617 ELK3P41970 407 aa3.01□□□□□ -1.93
TDP1-207ENST00000553617 MAGEA12P43365 314 aa3.01□□□□□ -1.93
TDP1-207ENST00000553617 CSNK1A1P48729 337 aa3.01□□□□□ -1.93
TDP1-207ENST00000553617 IDH2P48735 452 aaKnown RBP3.01□□□□□ -1.93
TDP1-207ENST00000553617 PRKXP51817 358 aa3.01□□□□□ -1.93
TDP1-207ENST00000553617 HNRNPA3P51991 378 aaKnown RBP3.01□□□□□ -1.93
TDP1-207ENST00000553617 EFNA3P52797 238 aa3.01□□□□□ -1.93
TDP1-207ENST00000553617 AP1S2P56377 157 aa3.01□□□□□ -1.93
TDP1-207ENST00000553617 TAS2R60P59551 318 aa3.01□□□□□ -1.93
TDP1-207ENST00000553617 AESQ08117 197 aa3.01□□□□□ -1.93
TDP1-207ENST00000553617 AQP6Q13520 282 aa3.01□□□□□ -1.93
TDP1-207ENST00000553617 SLC10A1Q14973 349 aa3.01□□□□□ -1.93
TDP1-207ENST00000553617 TAF1AQ15573 450 aaPredicted RBP3.01□□□□□ -1.93
TDP1-207ENST00000553617 SLC22A6Q4U2R8 563 aa3.01□□□□□ -1.93
TDP1-207ENST00000553617 GCSAMLQ5JQS6 135 aa3.01□□□□□ -1.93
TDP1-207ENST00000553617 LY6G6FQ5SQ64 297 aa3.01□□□□□ -1.93
TDP1-207ENST00000553617 LPCAT4Q643R3 524 aa3.01□□□□□ -1.93
TDP1-207ENST00000553617 IDO2Q6ZQW0 420 aa3.01□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms