RNA–Protein interactions for RNA: ENST00000553555.5

APEX1-205, Transcript of apurinic/apyrimidinic endodeoxyribonuclease 1, humanhuman

TSL 1 (best)

Gene APEX1, Length 1,603 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APEX1-205ENST00000553555 ARL9Q6T311 187 aa12.06□□□□□ -0.48
APEX1-205ENST00000553555 KLHL24Q6TFL4 600 aa12.06□□□□□ -0.48
APEX1-205ENST00000553555 C3P1Q6ZMU1 363 aa12.06□□□□□ -0.48
APEX1-205ENST00000553555 BTLAQ7Z6A9 289 aa12.06□□□□□ -0.48
APEX1-205ENST00000553555 SYT9Q86SS6 491 aa12.06□□□□□ -0.48
APEX1-205ENST00000553555 HIST2H2ABQ8IUE6 130 aaPredicted RBP12.06□□□□□ -0.48
APEX1-205ENST00000553555 SKA3Q8IX90 412 aa12.06□□□□□ -0.48
APEX1-205ENST00000553555 STARD4Q96DR4 205 aa12.06□□□□□ -0.48
APEX1-205ENST00000553555 WACQ9BTA9 647 aa12.06□□□□□ -0.48
APEX1-205ENST00000553555 PNRC2Q9NPJ4 139 aaKnown RBP12.06□□□□□ -0.48
APEX1-205ENST00000553555 STUB1Q9UNE7 303 aa12.06□□□□□ -0.48
APEX1-205ENST00000553555 POLEQ07864 2286 aa12.06□□□□□ -0.48
APEX1-205ENST00000553555 MYO7BQ6PIF6 2116 aa12.06□□□□□ -0.48
APEX1-205ENST00000553555 COL6A6A6NMZ7 2263 aa12.05□□□□□ -0.48
APEX1-205ENST00000553555 TRBV2A0A0J9YWF9 115 aa12.05□□□□□ -0.48
APEX1-205ENST00000553555 ZNF878C9JN71 531 aa12.05□□□□□ -0.48
APEX1-205ENST00000553555 FARS2O95363 451 aaKnown RBP12.05□□□□□ -0.48
APEX1-205ENST00000553555 CNOT4O95628 575 aaKnown RBP12.05□□□□□ -0.48
APEX1-205ENST00000553555 CGAP01215 116 aa12.05□□□□□ -0.48
APEX1-205ENST00000553555 ITGA5P08648 1049 aa12.05□□□□□ -0.48
APEX1-205ENST00000553555 GLI4P10075 376 aa12.05□□□□□ -0.48
APEX1-205ENST00000553555 NANOS3P60323 173 aaKnown RBP12.05□□□□□ -0.48
APEX1-205ENST00000553555 LSM3P62310 102 aaKnown RBP12.05□□□□□ -0.48
APEX1-205ENST00000553555 SLC3A1Q07837 685 aa12.05□□□□□ -0.48
APEX1-205ENST00000553555 ALKBH1Q13686 389 aaKnown RBP12.05□□□□□ -0.48
APEX1-205ENST00000553555 TIMM50Q3ZCQ8 353 aa12.05□□□□□ -0.48
APEX1-205ENST00000553555 CCDC92Q53HC0 331 aaPredicted RBP12.05□□□□□ -0.48
APEX1-205ENST00000553555 GDPGP1Q6ZNW5 385 aa12.05□□□□□ -0.48
APEX1-205ENST00000553555 SLC16A14Q7RTX9 510 aa12.05□□□□□ -0.48
APEX1-205ENST00000553555 NAXEQ8NCW5 288 aa12.05□□□□□ -0.48
APEX1-205ENST00000553555 HSD17B8Q92506 261 aa12.05□□□□□ -0.48
APEX1-205ENST00000553555 TMEM203Q969S6 136 aa12.05□□□□□ -0.48
APEX1-205ENST00000553555 SMIM19Q96E16 107 aa12.05□□□□□ -0.48
APEX1-205ENST00000553555 PGLYRP3Q96LB9 341 aa12.05□□□□□ -0.48
APEX1-205ENST00000553555 CHCHD6Q9BRQ6 235 aa12.05□□□□□ -0.48
APEX1-205ENST00000553555 KCNN2Q9H2S1 579 aa12.05□□□□□ -0.48
APEX1-205ENST00000553555 USP24Q9UPU5 2620 aa12.05□□□□□ -0.48
APEX1-205ENST00000553555 LOC100506127A0A0U1RQW1 187 aa12.04□□□□□ -0.48
APEX1-205ENST00000553555 TRIM64BA6NI03 449 aa12.04□□□□□ -0.48
APEX1-205ENST00000553555 SRSF10O75494 262 aaKnown RBP12.04□□□□□ -0.48
APEX1-205ENST00000553555 ATE1O95260 518 aa12.04□□□□□ -0.48
APEX1-205ENST00000553555 IL18BPO95998 194 aa12.04□□□□□ -0.48
APEX1-205ENST00000553555 PNPP00491 289 aa12.04□□□□□ -0.48
APEX1-205ENST00000553555 DCTDP32321 178 aa12.04□□□□□ -0.48
APEX1-205ENST00000553555 GDI2P50395 445 aaKnown RBP12.04□□□□□ -0.48
APEX1-205ENST00000553555 SH3BGRP55822 239 aaPredicted RBP12.04□□□□□ -0.48
APEX1-205ENST00000553555 PCBD1P61457 104 aa12.04□□□□□ -0.48
APEX1-205ENST00000553555 VBP1P61758 197 aa12.04□□□□□ -0.48
APEX1-205ENST00000553555 CD200R1LQ6Q8B3 271 aa12.04□□□□□ -0.48
APEX1-205ENST00000553555 Q6ZT83 130 aa12.04□□□□□ -0.48
APEX1-205ENST00000553555 OR2G2Q8NGZ5 317 aa12.04□□□□□ -0.48
APEX1-205ENST00000553555 FGFBP3Q8TAT2 258 aa12.04□□□□□ -0.48
APEX1-205ENST00000553555 GHSRQ92847 366 aa12.04□□□□□ -0.48
APEX1-205ENST00000553555 TMED9Q9BVK6 235 aa12.04□□□□□ -0.48
APEX1-205ENST00000553555 FRRS1LQ9P0K9 344 aa12.04□□□□□ -0.48
APEX1-205ENST00000553555 TINAGQ9UJW2 476 aa12.04□□□□□ -0.48
APEX1-205ENST00000553555 FBXL3Q9UKT7 428 aa12.04□□□□□ -0.48
APEX1-205ENST00000553555 SSR3Q9UNL2 185 aa12.04□□□□□ -0.48
APEX1-205ENST00000553555 PROCRQ9UNN8 238 aa12.04□□□□□ -0.48
APEX1-205ENST00000553555 TIMM10BQ9Y5J6 103 aa12.04□□□□□ -0.48
APEX1-205ENST00000553555 NBEAQ8NFP9 2946 aa12.04□□□□□ -0.48
APEX1-205ENST00000553555 CACNA1BQ00975 2339 aa12.04□□□□□ -0.48
APEX1-205ENST00000553555 TRDV1A0A1B0GX56 115 aa12.04□□□□□ -0.48
APEX1-205ENST00000553555 MMP7P09237 267 aaPredicted RBP12.04□□□□□ -0.48
APEX1-205ENST00000553555 PATE4P0C8F1 98 aa12.04□□□□□ -0.48
APEX1-205ENST00000553555 ZNF32P17041 273 aa12.04□□□□□ -0.48
APEX1-205ENST00000553555 CTSSP25774 331 aa12.04□□□□□ -0.48
APEX1-205ENST00000553555 PEX19P40855 299 aa12.04□□□□□ -0.48
APEX1-205ENST00000553555 FABP5Q01469 135 aa12.04□□□□□ -0.48
APEX1-205ENST00000553555 SCRN3Q0VDG4 424 aa12.04□□□□□ -0.48
APEX1-205ENST00000553555 TAF13Q15543 124 aa12.04□□□□□ -0.48
APEX1-205ENST00000553555 TRAM1Q15629 374 aa12.04□□□□□ -0.48
APEX1-205ENST00000553555 SOWAHCQ53LP3 525 aaPredicted RBP12.04□□□□□ -0.48
APEX1-205ENST00000553555 ELFN2Q5R3F8 820 aa12.04□□□□□ -0.48
APEX1-205ENST00000553555 PRSS35Q8N3Z0 413 aa12.04□□□□□ -0.48
APEX1-205ENST00000553555 MS4A15Q8N5U1 240 aa12.04□□□□□ -0.48
APEX1-205ENST00000553555 ST6GALNAC3Q8NDV1 305 aa12.04□□□□□ -0.48
APEX1-205ENST00000553555 OR1K1Q8NGR3 316 aa12.04□□□□□ -0.48
APEX1-205ENST00000553555 BCL2L2Q92843 193 aaPredicted RBP12.04□□□□□ -0.48
APEX1-205ENST00000553555 TRMT61AQ96FX7 289 aaKnown RBP12.04□□□□□ -0.48
APEX1-205ENST00000553555 CNTNAP3BQ96NU0 1288 aa12.04□□□□□ -0.48
APEX1-205ENST00000553555 CENPOQ9BU64 300 aa12.04□□□□□ -0.48
APEX1-205ENST00000553555 CNTNAP3Q9BZ76 1288 aa12.04□□□□□ -0.48
APEX1-205ENST00000553555 NIPAL2Q9H841 368 aa12.04□□□□□ -0.48
APEX1-205ENST00000553555 EXOSC4Q9NPD3 245 aaKnown RBP12.04□□□□□ -0.48
APEX1-205ENST00000553555 DDX28Q9NUL7 540 aaKnown RBP12.04□□□□□ -0.48
APEX1-205ENST00000553555 ZNF224Q9NZL3 707 aa12.04□□□□□ -0.48
APEX1-205ENST00000553555 SLC5A6Q9Y289 635 aa12.04□□□□□ -0.48
APEX1-205ENST00000553555 R4GMQ9 66 aa12.04□□□□□ -0.48
APEX1-205ENST00000553555 A0A096LPE4 126 aa12.03□□□□□ -0.48
APEX1-205ENST00000553555 A0A1W2PPZ6 126 aa12.03□□□□□ -0.48
APEX1-205ENST00000553555 OR4C45A6NMZ5 311 aa12.03□□□□□ -0.48
APEX1-205ENST00000553555 SLC22A1O15245 554 aa12.03□□□□□ -0.48
APEX1-205ENST00000553555 SGCEO43556 437 aa12.03□□□□□ -0.48
APEX1-205ENST00000553555 GPRIN2O60269 458 aa12.03□□□□□ -0.48
APEX1-205ENST00000553555 HLA-DPB1P04440 258 aa12.03□□□□□ -0.48
APEX1-205ENST00000553555 CD8BP10966 210 aa12.03□□□□□ -0.48
APEX1-205ENST00000553555 GALP22466 123 aa12.03□□□□□ -0.48
APEX1-205ENST00000553555 IGHV1-2P23083 117 aa12.03□□□□□ -0.48
APEX1-205ENST00000553555 PCSK6P29122 969 aa12.03□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 58.2 ms